RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 VEZTQ9HBM0 779 aa10.74□□□□□ -0.69
PDGFC-201ENST00000274071 EVCP57679 992 aa10.74□□□□□ -0.69
PDGFC-201ENST00000274071 CASC1Q6TDU7 716 aa10.74□□□□□ -0.69
PDGFC-201ENST00000274071 TEX11Q8IYF3 940 aa10.74□□□□□ -0.69
PDGFC-201ENST00000274071 PRAM1Q96QH2 718 aa10.74□□□□□ -0.69
PDGFC-201ENST00000274071 CARD6Q9BX69 1037 aa10.74□□□□□ -0.69
PDGFC-201ENST00000274071 PDE11AQ9HCR9 933 aa10.74□□□□□ -0.69
PDGFC-201ENST00000274071 REREQ9P2R6 1566 aa10.73□□□□□ -0.69
PDGFC-201ENST00000274071 EXOC5O00471 708 aa10.73□□□□□ -0.69
PDGFC-201ENST00000274071 IPO7O95373 1038 aaKnown RBP10.73□□□□□ -0.69
PDGFC-201ENST00000274071 ZNF165P49910 485 aa10.73□□□□□ -0.69
PDGFC-201ENST00000274071 GNAI1P63096 354 aa10.73□□□□□ -0.69
PDGFC-201ENST00000274071 APOBRQ0VD83 1088 aa10.73□□□□□ -0.69
PDGFC-201ENST00000274071 FMNL3Q8IVF7 1028 aa10.73□□□□□ -0.69
PDGFC-201ENST00000274071 ETAA1Q9NY74 926 aa10.73□□□□□ -0.69
PDGFC-201ENST00000274071 PPP6R1Q9UPN7 881 aa10.73□□□□□ -0.69
PDGFC-201ENST00000274071 RTL1A6NKG5 1358 aa10.73□□□□□ -0.69
PDGFC-201ENST00000274071 IQSEC2Q5JU85 1478 aa10.73□□□□□ -0.69
PDGFC-201ENST00000274071 ERC2O15083 957 aa10.73□□□□□ -0.69
PDGFC-201ENST00000274071 CTAGE5O15320 804 aa10.73□□□□□ -0.69
PDGFC-201ENST00000274071 IPO8O15397 1037 aaKnown RBP10.73□□□□□ -0.69
PDGFC-201ENST00000274071 GCFC2P16383 781 aaKnown RBP10.73□□□□□ -0.69
PDGFC-201ENST00000274071 GPTP24298 496 aa10.73□□□□□ -0.69
PDGFC-201ENST00000274071 ADCY2Q08462 1091 aa10.73□□□□□ -0.69
PDGFC-201ENST00000274071 LONRF2Q1L5Z9 754 aa10.73□□□□□ -0.69
PDGFC-201ENST00000274071 GPR161Q8N6U8 529 aaKnown RBP10.73□□□□□ -0.69
PDGFC-201ENST00000274071 N4BP2L2Q92802 583 aaPredicted RBP10.73□□□□□ -0.69
PDGFC-201ENST00000274071 MRFAP1L1Q96HT8 127 aa10.73□□□□□ -0.69
PDGFC-201ENST00000274071 FAM210AQ96ND0 272 aa10.73□□□□□ -0.69
PDGFC-201ENST00000274071 PARD6BQ9BYG5 372 aa10.73□□□□□ -0.69
PDGFC-201ENST00000274071 NUP62CLQ9H1M0 184 aa10.73□□□□□ -0.69
PDGFC-201ENST00000274071 MCM8Q9UJA3 840 aa10.73□□□□□ -0.69
PDGFC-201ENST00000274071 CHMP3Q9Y3E7 222 aa10.73□□□□□ -0.69
PDGFC-201ENST00000274071 POLR3AO14802 1390 aaPredicted RBP10.73□□□□□ -0.69
PDGFC-201ENST00000274071 KIF13AQ9H1H9 1805 aa10.73□□□□□ -0.69
PDGFC-201ENST00000274071 MYO5BQ9ULV0 1848 aa10.73□□□□□ -0.69
PDGFC-201ENST00000274071 SRGAP3O43295 1099 aa10.72□□□□□ -0.69
PDGFC-201ENST00000274071 N4BP1O75113 896 aaKnown RBP10.72□□□□□ -0.69
PDGFC-201ENST00000274071 SETQ01105 290 aaPredicted RBP10.72□□□□□ -0.69
PDGFC-201ENST00000274071 DNM1Q05193 864 aaKnown RBP10.72□□□□□ -0.69
PDGFC-201ENST00000274071 ZNF483Q8TF39 744 aaPredicted RBP10.72□□□□□ -0.69
PDGFC-201ENST00000274071 CARD14Q9BXL6 1004 aa10.72□□□□□ -0.69
PDGFC-201ENST00000274071 IRAK4Q9NWZ3 460 aa10.72□□□□□ -0.69
PDGFC-201ENST00000274071 FAN1Q9Y2M0 1017 aa10.72□□□□□ -0.69
PDGFC-201ENST00000274071 ATAD2Q6PL18 1390 aa10.72□□□□□ -0.69
PDGFC-201ENST00000274071 CCNHP51946 323 aaPredicted RBP10.72□□□□□ -0.69
PDGFC-201ENST00000274071 SKIDA1Q1XH10 827 aa10.72□□□□□ -0.69
PDGFC-201ENST00000274071 KCNB2Q92953 911 aa10.72□□□□□ -0.69
PDGFC-201ENST00000274071 TRIM6Q9C030 488 aaPredicted RBP10.72□□□□□ -0.69
PDGFC-201ENST00000274071 NUCKS1Q9H1E3 243 aaKnown RBP10.72□□□□□ -0.69
PDGFC-201ENST00000274071 DNAI1Q9UI46 699 aa10.72□□□□□ -0.69
PDGFC-201ENST00000274071 AGLP35573 1532 aa10.72□□□□□ -0.69
PDGFC-201ENST00000274071 STX6O43752 255 aa10.71□□□□□ -0.69
PDGFC-201ENST00000274071 F13A1P00488 732 aa10.71□□□□□ -0.69
PDGFC-201ENST00000274071 GNAI3P08754 354 aa10.71□□□□□ -0.69
PDGFC-201ENST00000274071 SYT1P21579 422 aa10.71□□□□□ -0.69
PDGFC-201ENST00000274071 GRIK3Q13003 919 aa10.71□□□□□ -0.69
PDGFC-201ENST00000274071 PALD1Q9ULE6 856 aa10.71□□□□□ -0.69
PDGFC-201ENST00000274071 TMEM131LA2VDJ0 1609 aa10.71□□□□□ -0.69
PDGFC-201ENST00000274071 ZFYVE9O95405 1425 aa10.71□□□□□ -0.69
PDGFC-201ENST00000274071 ETF1P62495 437 aaKnown RBP10.71□□□□□ -0.69
PDGFC-201ENST00000274071 OTUD7AQ8TE49 926 aaPredicted RBP10.71□□□□□ -0.69
PDGFC-201ENST00000274071 DNAJC25Q9H1X3 360 aa10.71□□□□□ -0.69
PDGFC-201ENST00000274071 BICC1Q9H694 974 aaKnown RBP10.71□□□□□ -0.69
PDGFC-201ENST00000274071 STAG3Q9UJ98 1225 aa10.71□□□□□ -0.69
PDGFC-201ENST00000274071 QRICH2Q9H0J4 1663 aa10.71□□□□□ -0.7
PDGFC-201ENST00000274071 FANCGO15287 622 aa10.71□□□□□ -0.7
PDGFC-201ENST00000274071 URI1O94763 535 aaPredicted RBP10.71□□□□□ -0.7
PDGFC-201ENST00000274071 TUBB4AP04350 444 aa10.71□□□□□ -0.7
PDGFC-201ENST00000274071 MYBL2P10244 700 aa10.71□□□□□ -0.7
PDGFC-201ENST00000274071 MCM6Q14566 821 aa10.71□□□□□ -0.7
PDGFC-201ENST00000274071 LRRFIP1Q32MZ4 808 aaKnown RBP10.71□□□□□ -0.7
PDGFC-201ENST00000274071 AP1ARQ63HQ0 302 aa10.71□□□□□ -0.7
PDGFC-201ENST00000274071 SARM1Q6SZW1 724 aa10.71□□□□□ -0.7
PDGFC-201ENST00000274071 FAM107BQ9H098 131 aa10.71□□□□□ -0.7
PDGFC-201ENST00000274071 ATP6V1DQ9Y5K8 247 aa10.71□□□□□ -0.7
PDGFC-201ENST00000274071 RTN2O75298 545 aa10.7□□□□□ -0.7
PDGFC-201ENST00000274071 DDR1Q08345 913 aa10.7□□□□□ -0.7
PDGFC-201ENST00000274071 CCDC26Q8TAB7 109 aa10.7□□□□□ -0.7
PDGFC-201ENST00000274071 TNMDQ9H2S6 317 aa10.7□□□□□ -0.7
PDGFC-201ENST00000274071 PSDA5PKW4 1024 aaPredicted RBP10.7□□□□□ -0.7
PDGFC-201ENST00000274071 CRYMQ14894 314 aa10.7□□□□□ -0.7
PDGFC-201ENST00000274071 HOMER1Q86YM7 354 aa10.7□□□□□ -0.7
PDGFC-201ENST00000274071 CNNM3Q8NE01 707 aa10.7□□□□□ -0.7
PDGFC-201ENST00000274071 THOC1Q96FV9 657 aaKnown RBP10.7□□□□□ -0.7
PDGFC-201ENST00000274071 CLIC6Q96NY7 704 aa10.7□□□□□ -0.7
PDGFC-201ENST00000274071 UPF3BQ9BZI7 483 aaKnown RBP10.7□□□□□ -0.7
PDGFC-201ENST00000274071 SLC12A5Q9H2X9 1139 aa10.7□□□□□ -0.7
PDGFC-201ENST00000274071 EME2A4GXA9 379 aaPredicted RBP10.69□□□□□ -0.7
PDGFC-201ENST00000274071 GNL2Q13823 731 aaKnown RBP10.69□□□□□ -0.7
PDGFC-201ENST00000274071 ZKSCAN4Q969J2 545 aaPredicted RBP10.69□□□□□ -0.7
PDGFC-201ENST00000274071 CLTCQ00610 1675 aaKnown RBP10.69□□□□□ -0.7
PDGFC-201ENST00000274071 PHLPP2Q6ZVD8 1323 aa10.69□□□□□ -0.7
PDGFC-201ENST00000274071 NF2P35240 595 aa10.69□□□□□ -0.7
PDGFC-201ENST00000274071 PARP3Q9Y6F1 533 aa10.69□□□□□ -0.7
PDGFC-201ENST00000274071 CCT2P78371 535 aaKnown RBP10.68□□□□□ -0.7
PDGFC-201ENST00000274071 SAFB2Q14151 953 aaKnown RBP eCLIP10.68□□□□□ -0.7
PDGFC-201ENST00000274071 DHX8Q14562 1220 aaKnown RBP10.68□□□□□ -0.7
PDGFC-201ENST00000274071 VPS53Q5VIR6 699 aa10.68□□□□□ -0.7
PDGFC-201ENST00000274071 CD248Q9HCU0 757 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms