RNA–Protein interactions for RNA: ENST00000262949.7

HMG20B-201, Transcript of high mobility group 20B, humanhuman

TSL 5

Gene HMG20B, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-201ENST00000262949 HSPA1BP0DMV9 641 aaKnown RBP29.84■■■□□ 2.37
HMG20B-201ENST00000262949 MAP1SQ66K74 1059 aaPredicted RBP29.84■■■□□ 2.37
HMG20B-201ENST00000262949 ZNRF3Q9ULT6 936 aa29.84■■■□□ 2.37
HMG20B-201ENST00000262949 COL4A5P29400 1685 aa29.84■■■□□ 2.37
HMG20B-201ENST00000262949 HSP90B1P14625 803 aaKnown RBP29.82■■■□□ 2.36
HMG20B-201ENST00000262949 TRIM28Q13263 835 aaKnown RBP29.82■■■□□ 2.36
HMG20B-201ENST00000262949 PCNTO95613 3336 aa29.81■■■□□ 2.36
HMG20B-201ENST00000262949 EPS15P42566 896 aa29.81■■■□□ 2.36
HMG20B-201ENST00000262949 SCNN1DP51172 638 aa29.81■■■□□ 2.36
HMG20B-201ENST00000262949 KIAA2012Q0VF49 1180 aa29.8■■■□□ 2.36
HMG20B-201ENST00000262949 SF3B3Q15393 1217 aaKnown RBP29.8■■■□□ 2.36
HMG20B-201ENST00000262949 RTL5Q5HYW3 569 aaPredicted RBP29.8■■■□□ 2.36
HMG20B-201ENST00000262949 USP50Q70EL3 339 aaPredicted RBP29.8■■■□□ 2.36
HMG20B-201ENST00000262949 LAMB2P55268 1798 aa29.8■■■□□ 2.36
HMG20B-201ENST00000262949 CNTNAP1P78357 1384 aa29.79■■■□□ 2.36
HMG20B-201ENST00000262949 IRS4O14654 1257 aaPredicted RBP29.79■■■□□ 2.36
HMG20B-201ENST00000262949 COL13A1Q5TAT6 717 aaPredicted RBP29.79■■■□□ 2.36
HMG20B-201ENST00000262949 DDX58O95786 925 aaKnown RBP29.78■■■□□ 2.36
HMG20B-201ENST00000262949 CXCL9Q07325 125 aa29.78■■■□□ 2.36
HMG20B-201ENST00000262949 TNIP1Q15025 636 aa29.78■■■□□ 2.36
HMG20B-201ENST00000262949 CCDC30Q5VVM6 783 aa29.78■■■□□ 2.36
HMG20B-201ENST00000262949 PHAXQ9H814 394 aaKnown RBP29.78■■■□□ 2.36
HMG20B-201ENST00000262949 CIAPIN1Q6FI81 312 aa29.77■■■□□ 2.36
HMG20B-201ENST00000262949 ADAMTSL1Q8N6G6 1762 aa29.77■■■□□ 2.36
HMG20B-201ENST00000262949 ZEB1P37275 1124 aaPredicted RBP29.76■■■□□ 2.35
HMG20B-201ENST00000262949 ZBTB38Q8NAP3 1195 aaPredicted RBP29.76■■■□□ 2.35
HMG20B-201ENST00000262949 C8orf58Q8NAV2 365 aa29.76■■■□□ 2.35
HMG20B-201ENST00000262949 ADARB2Q9NS39 739 aaKnown RBP29.76■■■□□ 2.35
HMG20B-201ENST00000262949 GPRC5DQ9NZD1 345 aa29.76■■■□□ 2.35
HMG20B-201ENST00000262949 MYD88Q99836 296 aa29.75■■■□□ 2.35
HMG20B-201ENST00000262949 BCL2L13Q9BXK5 485 aa29.75■■■□□ 2.35
HMG20B-201ENST00000262949 NSFL1CQ9UNZ2 370 aaKnown RBP29.75■■■□□ 2.35
HMG20B-201ENST00000262949 CELF1Q92879 486 aaKnown RBP29.74■■■□□ 2.35
HMG20B-201ENST00000262949 RAD17O75943 681 aa29.73■■■□□ 2.35
HMG20B-201ENST00000262949 WASHC4Q2M389 1173 aa29.73■■■□□ 2.35
HMG20B-201ENST00000262949 CCDC191Q8NCU4 936 aa29.73■■■□□ 2.35
HMG20B-201ENST00000262949 ABT1Q9ULW3 272 aaKnown RBP29.73■■■□□ 2.35
HMG20B-201ENST00000262949 GMPSP49915 693 aaPredicted RBP29.72■■■□□ 2.35
HMG20B-201ENST00000262949 DEFB115Q30KQ5 88 aa29.72■■■□□ 2.35
HMG20B-201ENST00000262949 TNS4Q8IZW8 715 aa29.72■■■□□ 2.35
HMG20B-201ENST00000262949 DDX60Q8IY21 1712 aaKnown RBP29.71■■■□□ 2.35
HMG20B-201ENST00000262949 C6orf229H3BNL8 230 aa29.71■■■□□ 2.35
HMG20B-201ENST00000262949 VEGFBP49765 207 aa29.71■■■□□ 2.35
HMG20B-201ENST00000262949 RPS8P62241 208 aaKnown RBP29.71■■■□□ 2.35
HMG20B-201ENST00000262949 CWC25Q9NXE8 425 aaPredicted RBP29.71■■■□□ 2.35
HMG20B-201ENST00000262949 LTBP1Q14766 1721 aa29.71■■■□□ 2.35
HMG20B-201ENST00000262949 CDHR2Q9BYE9 1310 aa29.71■■■□□ 2.35
HMG20B-201ENST00000262949 EYA3Q99504 573 aa29.7■■■□□ 2.35
HMG20B-201ENST00000262949 STK31Q9BXU1 1019 aa29.7■■■□□ 2.35
HMG20B-201ENST00000262949 CCDC27Q2M243 656 aa29.69■■■□□ 2.34
HMG20B-201ENST00000262949 AIDAQ96BJ3 306 aa29.69■■■□□ 2.34
HMG20B-201ENST00000262949 METTL22Q9BUU2 404 aaPredicted RBP29.69■■■□□ 2.34
HMG20B-201ENST00000262949 TAF1P21675 1872 aa29.68■■■□□ 2.34
HMG20B-201ENST00000262949 RASSF10A6NK89 507 aa29.68■■■□□ 2.34
HMG20B-201ENST00000262949 PCCAP05165 728 aaPredicted RBP29.68■■■□□ 2.34
HMG20B-201ENST00000262949 CCDC152Q4G0S7 254 aa29.68■■■□□ 2.34
HMG20B-201ENST00000262949 CCDC184Q52MB2 194 aa29.68■■■□□ 2.34
HMG20B-201ENST00000262949 PDE8AO60658 829 aa29.67■■■□□ 2.34
HMG20B-201ENST00000262949 GPSM2P81274 684 aa29.67■■■□□ 2.34
HMG20B-201ENST00000262949 TSR2Q969E8 191 aaKnown RBP29.67■■■□□ 2.34
HMG20B-201ENST00000262949 H7C1D1 291 aa29.66■■■□□ 2.34
HMG20B-201ENST00000262949 RIMBP2O15034 1052 aa29.66■■■□□ 2.34
HMG20B-201ENST00000262949 WWC1Q8IX03 1113 aa29.66■■■□□ 2.34
HMG20B-201ENST00000262949 TSPYL6Q8N831 410 aa29.66■■■□□ 2.34
HMG20B-201ENST00000262949 MAP3K2Q9Y2U5 619 aa29.66■■■□□ 2.34
HMG20B-201ENST00000262949 ANP32CO43423 234 aa29.65■■■□□ 2.34
HMG20B-201ENST00000262949 NEXNQ0ZGT2 675 aa29.65■■■□□ 2.34
HMG20B-201ENST00000262949 MRS2Q9HD23 443 aa29.65■■■□□ 2.34
HMG20B-201ENST00000262949 POLLQ9UGP5 575 aa29.65■■■□□ 2.34
HMG20B-201ENST00000262949 CNOT7Q9UIV1 285 aaKnown RBP29.65■■■□□ 2.34
HMG20B-201ENST00000262949 YDJCA8MPS7 323 aa29.64■■■□□ 2.34
HMG20B-201ENST00000262949 KSR2Q6VAB6 950 aa29.64■■■□□ 2.34
HMG20B-201ENST00000262949 DBNDD1Q9H9R9 158 aa29.64■■■□□ 2.34
HMG20B-201ENST00000262949 ANKIB1Q9P2G1 1089 aa29.64■■■□□ 2.34
HMG20B-201ENST00000262949 LRRC37AA6NMS7 1700 aa29.64■■■□□ 2.34
HMG20B-201ENST00000262949 G3V3G9 751 aa29.63■■■□□ 2.33
HMG20B-201ENST00000262949 DCAF8Q5TAQ9 597 aa29.63■■■□□ 2.33
HMG20B-201ENST00000262949 PAXIP1Q6ZW49 1069 aaPredicted RBP29.63■■■□□ 2.33
HMG20B-201ENST00000262949 ZC3H15Q8WU90 426 aaKnown RBP29.63■■■□□ 2.33
HMG20B-201ENST00000262949 ZC3H12CQ9C0D7 883 aaKnown RBP29.63■■■□□ 2.33
HMG20B-201ENST00000262949 SEC31BQ9NQW1 1179 aa29.63■■■□□ 2.33
HMG20B-201ENST00000262949 DUOX1Q9NRD9 1551 aa29.62■■■□□ 2.33
HMG20B-201ENST00000262949 TWISTNBQ3B726 338 aaPredicted RBP29.62■■■□□ 2.33
HMG20B-201ENST00000262949 TBC1D16Q8TBP0 767 aa29.62■■■□□ 2.33
HMG20B-201ENST00000262949 WDR33Q9C0J8 1336 aaKnown RBP29.62■■■□□ 2.33
HMG20B-201ENST00000262949 PI4KAP2A4QPH2 592 aa29.61■■■□□ 2.33
HMG20B-201ENST00000262949 TRAF5O00463 557 aa29.61■■■□□ 2.33
HMG20B-201ENST00000262949 PI4KAP1Q8N8J0 262 aa29.61■■■□□ 2.33
HMG20B-201ENST00000262949 DPF2Q92785 391 aa29.61■■■□□ 2.33
HMG20B-201ENST00000262949 JARID2Q92833 1246 aaPredicted RBP29.61■■■□□ 2.33
HMG20B-201ENST00000262949 IL16Q14005 1332 aa29.61■■■□□ 2.33
HMG20B-201ENST00000262949 PSMD14O00487 310 aa29.6■■■□□ 2.33
HMG20B-201ENST00000262949 ECE2O60344 883 aa29.6■■■□□ 2.33
HMG20B-201ENST00000262949 ECE1P42892 770 aa29.6■■■□□ 2.33
HMG20B-201ENST00000262949 FMR1Q06787 632 aaKnown RBP eCLIP29.6■■■□□ 2.33
HMG20B-201ENST00000262949 NCBP3Q53F19 620 aaKnown RBP29.6■■■□□ 2.33
HMG20B-201ENST00000262949 MICALL2Q8IY33 904 aa29.6■■■□□ 2.33
HMG20B-201ENST00000262949 CCDC85AQ96PX6 553 aaPredicted RBP29.6■■■□□ 2.33
HMG20B-201ENST00000262949 PODXL2Q9NZ53 605 aa29.6■■■□□ 2.33
HMG20B-201ENST00000262949 FOXN1O15353 648 aa29.59■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms