RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 SUSD4Q5VX71 490 aa21.67■■□□□ 1.06
SRSF1-201ENST00000258962 UBN2Q6ZU65 1347 aa21.67■■□□□ 1.06
SRSF1-201ENST00000258962 GCKRQ14397 625 aa21.66■■□□□ 1.06
SRSF1-201ENST00000258962 FAM161AQ3B820 660 aa21.66■■□□□ 1.06
SRSF1-201ENST00000258962 SSH3Q8TE77 659 aa21.66■■□□□ 1.06
SRSF1-201ENST00000258962 UTP14AQ9BVJ6 771 aaKnown RBP21.66■■□□□ 1.06
SRSF1-201ENST00000258962 POLA2Q14181 598 aa21.65■■□□□ 1.06
SRSF1-201ENST00000258962 NUTM1Q86Y26 1132 aa21.65■■□□□ 1.06
SRSF1-201ENST00000258962 ZNF622Q969S3 477 aaKnown RBP eCLIP21.65■■□□□ 1.064e-15■■□□□ 12.1
SRSF1-201ENST00000258962 ANKRD36CQ5JPF3 1778 aa21.65■■□□□ 1.06
SRSF1-201ENST00000258962 KAZALD1Q96I82 304 aa21.65■■□□□ 1.06
SRSF1-201ENST00000258962 SUCLG2Q96I99 432 aa21.65■■□□□ 1.06
SRSF1-201ENST00000258962 ATP5J2-PTCD1G3V325 749 aa21.64■■□□□ 1.05
SRSF1-201ENST00000258962 MTX1Q13505 466 aa21.64■■□□□ 1.05
SRSF1-201ENST00000258962 ERFEQ4G0M1 354 aa21.64■■□□□ 1.05
SRSF1-201ENST00000258962 NLRP10Q86W26 655 aa21.64■■□□□ 1.05
SRSF1-201ENST00000258962 TTLL6Q8N841 843 aa21.64■■□□□ 1.05
SRSF1-201ENST00000258962 TRMT112Q9UI30 125 aaKnown RBP21.63■■□□□ 1.05
SRSF1-201ENST00000258962 KIAA1551Q9HCM1 1747 aa21.63■■□□□ 1.05
SRSF1-201ENST00000258962 NTSR2O95665 410 aa21.62■■□□□ 1.05
SRSF1-201ENST00000258962 MASTLQ96GX5 879 aa21.62■■□□□ 1.05
SRSF1-201ENST00000258962 EXOC6BQ9Y2D4 811 aa21.62■■□□□ 1.05
SRSF1-201ENST00000258962 SMARCA5O60264 1052 aaPredicted RBP21.61■■□□□ 1.05
SRSF1-201ENST00000258962 SRGNP10124 158 aa21.61■■□□□ 1.05
SRSF1-201ENST00000258962 ISCA1Q9BUE6 129 aa21.61■■□□□ 1.05
SRSF1-201ENST00000258962 HDAC5Q9UQL6 1122 aa21.61■■□□□ 1.05
SRSF1-201ENST00000258962 APBB1O00213 710 aa21.6■■□□□ 1.05
SRSF1-201ENST00000258962 SRGAP3O43295 1099 aa21.6■■□□□ 1.05
SRSF1-201ENST00000258962 STYK1Q6J9G0 422 aa21.6■■□□□ 1.05
SRSF1-201ENST00000258962 ARHGAP27Q6ZUM4 889 aa21.6■■□□□ 1.05
SRSF1-201ENST00000258962 CNKSR1Q969H4 720 aa21.6■■□□□ 1.05
SRSF1-201ENST00000258962 KLRG2A4D1S0 409 aaPredicted RBP21.6■■□□□ 1.05
SRSF1-201ENST00000258962 NPR1P16066 1061 aa21.6■■□□□ 1.05
SRSF1-201ENST00000258962 YY1P25490 414 aa21.6■■□□□ 1.05
SRSF1-201ENST00000258962 CASP7P55210 303 aa21.6■■□□□ 1.05
SRSF1-201ENST00000258962 TRIM28Q13263 835 aaKnown RBP21.6■■□□□ 1.05
SRSF1-201ENST00000258962 BICC1Q9H694 974 aaKnown RBP21.6■■□□□ 1.05
SRSF1-201ENST00000258962 NLRP3Q96P20 1036 aa21.59■■□□□ 1.05
SRSF1-201ENST00000258962 ANKRD31Q8N7Z5 1873 aa21.59■■□□□ 1.05
SRSF1-201ENST00000258962 SH3TC1Q8TE82 1336 aa21.59■■□□□ 1.05
SRSF1-201ENST00000258962 C16orf71Q8IYS4 520 aaPredicted RBP21.58■■□□□ 1.04
SRSF1-201ENST00000258962 ABCC12Q96J65 1359 aa21.58■■□□□ 1.04
SRSF1-201ENST00000258962 EPHA10Q5JZY3 1008 aa21.57■■□□□ 1.04
SRSF1-201ENST00000258962 SLC10A5Q5PT55 438 aa21.57■■□□□ 1.04
SRSF1-201ENST00000258962 PLEKHM2Q8IWE5 1019 aa21.57■■□□□ 1.04
SRSF1-201ENST00000258962 JARID2Q92833 1246 aaPredicted RBP21.57■■□□□ 1.04
SRSF1-201ENST00000258962 RPGRQ92834 1020 aaKnown RBP21.57■■□□□ 1.04
SRSF1-201ENST00000258962 CWC25Q9NXE8 425 aaPredicted RBP21.57■■□□□ 1.04
SRSF1-201ENST00000258962 H7C1W4 665 aa21.56■■□□□ 1.04
SRSF1-201ENST00000258962 UBE3BQ7Z3V4 1068 aa21.56■■□□□ 1.04
SRSF1-201ENST00000258962 CCDC191Q8NCU4 936 aa21.56■■□□□ 1.04
SRSF1-201ENST00000258962 OTUD7AQ8TE49 926 aaPredicted RBP21.56■■□□□ 1.04
SRSF1-201ENST00000258962 ZBTB47Q9UFB7 747 aaPredicted RBP21.56■■□□□ 1.04
SRSF1-201ENST00000258962 BRCA1P38398 1863 aaKnown RBP21.56■■□□□ 1.04
SRSF1-201ENST00000258962 ALDH1B1P30837 517 aa21.55■■□□□ 1.04
SRSF1-201ENST00000258962 LRRCC1Q9C099 1032 aa21.55■■□□□ 1.04
SRSF1-201ENST00000258962 SURF6O75683 361 aaKnown RBP21.55■■□□□ 1.04
SRSF1-201ENST00000258962 HCLS1P14317 486 aaPredicted RBP21.55■■□□□ 1.04
SRSF1-201ENST00000258962 CRY2Q49AN0 593 aa21.55■■□□□ 1.04
SRSF1-201ENST00000258962 FAM89AQ96GI7 184 aa21.55■■□□□ 1.04
SRSF1-201ENST00000258962 ZNF219Q9P2Y4 722 aaPredicted RBP21.55■■□□□ 1.04
SRSF1-201ENST00000258962 RIC1Q4ADV7 1423 aa21.54■■□□□ 1.04
SRSF1-201ENST00000258962 PRPF40BQ6NWY9 871 aaKnown RBP21.54■■□□□ 1.04
SRSF1-201ENST00000258962 SYNE4Q8N205 404 aa21.54■■□□□ 1.04
SRSF1-201ENST00000258962 NOP58Q9Y2X3 529 aaKnown RBP21.54■■□□□ 1.04
SRSF1-201ENST00000258962 CHD4Q14839 1912 aa21.54■■□□□ 1.04
SRSF1-201ENST00000258962 GOLGB1Q14789 3259 aaKnown RBP21.53■■□□□ 1.04
SRSF1-201ENST00000258962 SALL3Q9BXA9 1300 aa21.53■■□□□ 1.04
SRSF1-201ENST00000258962 RAB11FIP3O75154 756 aa21.53■■□□□ 1.04
SRSF1-201ENST00000258962 HSP90B1P14625 803 aaKnown RBP21.53■■□□□ 1.04
SRSF1-201ENST00000258962 RABL6Q3YEC7 729 aaPredicted RBP21.53■■□□□ 1.04
SRSF1-201ENST00000258962 BMP2KLQ5H9B9 411 aa21.53■■□□□ 1.04
SRSF1-201ENST00000258962 RTL5Q5HYW3 569 aaPredicted RBP21.53■■□□□ 1.04
SRSF1-201ENST00000258962 RBM17Q96I25 401 aaKnown RBP21.53■■□□□ 1.04
SRSF1-201ENST00000258962 DLEC1Q9Y238 1755 aa21.52■■□□□ 1.04
SRSF1-201ENST00000258962 C21orf2O43822 256 aa21.52■■□□□ 1.04
SRSF1-201ENST00000258962 ZBTB38Q8NAP3 1195 aaPredicted RBP21.52■■□□□ 1.04
SRSF1-201ENST00000258962 HOXA10P31260 410 aaPredicted RBP21.51■■□□□ 1.03
SRSF1-201ENST00000258962 SOGA3Q5TF21 947 aa21.51■■□□□ 1.03
SRSF1-201ENST00000258962 BCL11AQ9H165 835 aa21.51■■□□□ 1.03
SRSF1-201ENST00000258962 PA2G4Q9UQ80 394 aaKnown RBP21.51■■□□□ 1.03
SRSF1-201ENST00000258962 ARFGEF1Q9Y6D6 1849 aa21.51■■□□□ 1.03
SRSF1-201ENST00000258962 FOXO4P98177 505 aa21.5■■□□□ 1.03
SRSF1-201ENST00000258962 C3orf67Q6ZVT6 689 aa21.5■■□□□ 1.03
SRSF1-201ENST00000258962 COL11A2P13942 1736 aaPredicted RBP21.5■■□□□ 1.03
SRSF1-201ENST00000258962 IRS4O14654 1257 aaPredicted RBP21.5■■□□□ 1.03
SRSF1-201ENST00000258962 PCCAP05165 728 aaPredicted RBP21.5■■□□□ 1.03
SRSF1-201ENST00000258962 GSPT1P15170 499 aaKnown RBP21.5■■□□□ 1.03
SRSF1-201ENST00000258962 HSP90AB4PQ58FF6 505 aa21.5■■□□□ 1.03
SRSF1-201ENST00000258962 RHPN1Q8TCX5 695 aa21.5■■□□□ 1.03
SRSF1-201ENST00000258962 CRAMP1Q96RY5 1269 aa21.5■■□□□ 1.03
SRSF1-201ENST00000258962 UTRNP46939 3433 aa21.49■■□□□ 1.03
SRSF1-201ENST00000258962 SEC24BO95487 1268 aa21.49■■□□□ 1.03
SRSF1-201ENST00000258962 TTC22Q5TAA0 569 aa21.49■■□□□ 1.03
SRSF1-201ENST00000258962 KIF1BPQ96EK5 621 aa21.49■■□□□ 1.03
SRSF1-201ENST00000258962 RFX5P48382 616 aaPredicted RBP21.48■■□□□ 1.03
SRSF1-201ENST00000258962 OSBPL3Q9H4L5 887 aa21.48■■□□□ 1.03
SRSF1-201ENST00000258962 IL1RAPL2Q9NP60 686 aa21.48■■□□□ 1.03
SRSF1-201ENST00000258962 MYH3P11055 1940 aa21.47■■□□□ 1.03
SRSF1-201ENST00000258962 TNRC6CQ9HCJ0 1690 aaKnown RBP21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms