RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 QSER1Q2KHR3 1735 aa4.95□□□□□ -1.62
UBE4A-201ENST00000252108 ANKRD24Q8TF21 1146 aa4.95□□□□□ -1.62
UBE4A-201ENST00000252108 SUCLG2Q96I99 432 aa4.95□□□□□ -1.62
UBE4A-201ENST00000252108 TMEM63CQ9P1W3 806 aa4.95□□□□□ -1.62
UBE4A-201ENST00000252108 NRXN2Q9P2S2 1712 aa4.95□□□□□ -1.62
UBE4A-201ENST00000252108 NEURL1BA8MQ27 555 aa4.95□□□□□ -1.62
UBE4A-201ENST00000252108 TSHZ3Q63HK5 1081 aa4.95□□□□□ -1.62
UBE4A-201ENST00000252108 ATG9AQ7Z3C6 839 aa4.95□□□□□ -1.62
UBE4A-201ENST00000252108 KIF2AO00139 706 aaPredicted RBP4.95□□□□□ -1.62
UBE4A-201ENST00000252108 PRPF40AO75400 957 aaKnown RBP4.95□□□□□ -1.62
UBE4A-201ENST00000252108 PTPN12Q05209 780 aaKnown RBP4.95□□□□□ -1.62
UBE4A-201ENST00000252108 LINS1Q8NG48 757 aa4.95□□□□□ -1.62
UBE4A-201ENST00000252108 BCL9O00512 1426 aa4.95□□□□□ -1.62
UBE4A-201ENST00000252108 PI4KAP2A4QPH2 592 aa4.95□□□□□ -1.62
UBE4A-201ENST00000252108 H7C1W4 665 aa4.95□□□□□ -1.62
UBE4A-201ENST00000252108 CCDC183Q5T5S1 534 aa4.95□□□□□ -1.62
UBE4A-201ENST00000252108 PI4KAP1Q8N8J0 262 aa4.95□□□□□ -1.62
UBE4A-201ENST00000252108 EAF2Q96CJ1 260 aaPredicted RBP4.95□□□□□ -1.62
UBE4A-201ENST00000252108 CHAMP1Q96JM3 812 aa4.95□□□□□ -1.62
UBE4A-201ENST00000252108 DBF4Q9UBU7 674 aaPredicted RBP4.95□□□□□ -1.62
UBE4A-201ENST00000252108 CCDC171Q6TFL3 1326 aa4.95□□□□□ -1.62
UBE4A-201ENST00000252108 TNRC6CQ9HCJ0 1690 aaKnown RBP4.95□□□□□ -1.62
UBE4A-201ENST00000252108 ZNF790Q6PG37 636 aa4.95□□□□□ -1.62
UBE4A-201ENST00000252108 DRC7Q8IY82 874 aa4.95□□□□□ -1.62
UBE4A-201ENST00000252108 FOXD4L1Q9NU39 408 aa4.95□□□□□ -1.62
UBE4A-201ENST00000252108 CCDC66A2RUB6 948 aa4.94□□□□□ -1.62
UBE4A-201ENST00000252108 ADD1P35611 737 aaKnown RBP4.94□□□□□ -1.62
UBE4A-201ENST00000252108 PTH1RQ03431 593 aa4.94□□□□□ -1.62
UBE4A-201ENST00000252108 NGDNQ8NEJ9 315 aaKnown RBP4.94□□□□□ -1.62
UBE4A-201ENST00000252108 SMC3Q9UQE7 1217 aa4.94□□□□□ -1.62
UBE4A-201ENST00000252108 NUTM2FA1L443 756 aa4.94□□□□□ -1.62
UBE4A-201ENST00000252108 TRIM6-TRIM34B2RNG4 842 aa4.94□□□□□ -1.62
UBE4A-201ENST00000252108 CCP110O43303 1012 aa4.94□□□□□ -1.62
UBE4A-201ENST00000252108 CSB-PGBD3P0DP91 1061 aa4.94□□□□□ -1.62
UBE4A-201ENST00000252108 ZKSCAN1P17029 563 aaPredicted RBP4.94□□□□□ -1.62
UBE4A-201ENST00000252108 KCNJ4P48050 445 aa4.94□□□□□ -1.62
UBE4A-201ENST00000252108 ZSCAN23Q3MJ62 389 aa4.94□□□□□ -1.62
UBE4A-201ENST00000252108 GREB1LQ9C091 1923 aaPredicted RBP4.94□□□□□ -1.62
UBE4A-201ENST00000252108 NEMFO60524 1076 aa4.94□□□□□ -1.62
UBE4A-201ENST00000252108 PSMA5P28066 241 aa4.94□□□□□ -1.62
UBE4A-201ENST00000252108 ANKRD1Q15327 319 aa4.94□□□□□ -1.62
UBE4A-201ENST00000252108 RGS22Q8NE09 1264 aa4.94□□□□□ -1.62
UBE4A-201ENST00000252108 TLR7Q9NYK1 1049 aaKnown RBP4.94□□□□□ -1.62
UBE4A-201ENST00000252108 CCDC192P0DO97 292 aa4.94□□□□□ -1.62
UBE4A-201ENST00000252108 AMPHP49418 695 aa4.94□□□□□ -1.62
UBE4A-201ENST00000252108 TOB2Q14106 344 aaPredicted RBP4.94□□□□□ -1.62
UBE4A-201ENST00000252108 ADCK5Q3MIX3 580 aa4.94□□□□□ -1.62
UBE4A-201ENST00000252108 HDGFL1Q5TGJ6 251 aa4.94□□□□□ -1.62
UBE4A-201ENST00000252108 CREBRFQ8IUR6 639 aa4.94□□□□□ -1.62
UBE4A-201ENST00000252108 GTPBP4Q9BZE4 634 aaKnown RBP4.94□□□□□ -1.62
UBE4A-201ENST00000252108 ABCC12Q96J65 1359 aa4.94□□□□□ -1.62
UBE4A-201ENST00000252108 WDR17Q8IZU2 1322 aa4.94□□□□□ -1.62
UBE4A-201ENST00000252108 OS9Q13438 667 aaPredicted RBP4.94□□□□□ -1.62
UBE4A-201ENST00000252108 GCKRQ14397 625 aa4.94□□□□□ -1.62
UBE4A-201ENST00000252108 BRINP3Q76B58 766 aa4.94□□□□□ -1.62
UBE4A-201ENST00000252108 CNTROBQ8N137 903 aa4.94□□□□□ -1.62
UBE4A-201ENST00000252108 PLA2G12BQ9BX93 195 aa4.94□□□□□ -1.62
UBE4A-201ENST00000252108 SH2B1Q9NRF2 756 aaPredicted RBP4.94□□□□□ -1.62
UBE4A-201ENST00000252108 TUBB4AP04350 444 aa4.93□□□□□ -1.62
UBE4A-201ENST00000252108 NEK4P51957 841 aa4.93□□□□□ -1.62
UBE4A-201ENST00000252108 VGLL2Q8N8G2 317 aa4.93□□□□□ -1.62
UBE4A-201ENST00000252108 METTL22Q9BUU2 404 aaPredicted RBP4.93□□□□□ -1.62
UBE4A-201ENST00000252108 WDR70Q9NW82 654 aa4.93□□□□□ -1.62
UBE4A-201ENST00000252108 ERC1Q8IUD2 1116 aa4.93□□□□□ -1.62
UBE4A-201ENST00000252108 KIF1BPQ96EK5 621 aa4.93□□□□□ -1.62
UBE4A-201ENST00000252108 PLCB2Q00722 1185 aa4.93□□□□□ -1.62
UBE4A-201ENST00000252108 GPR108Q9NPR9 543 aa4.93□□□□□ -1.62
UBE4A-201ENST00000252108 SH3TC1Q8TE82 1336 aa4.93□□□□□ -1.62
UBE4A-201ENST00000252108 GOLGA6L19H0YKK7 550 aa4.93□□□□□ -1.62
UBE4A-201ENST00000252108 AP5Z1O43299 807 aa4.93□□□□□ -1.62
UBE4A-201ENST00000252108 FAM193AP78312 1265 aa4.93□□□□□ -1.62
UBE4A-201ENST00000252108 TRIM28Q13263 835 aaKnown RBP4.93□□□□□ -1.62
UBE4A-201ENST00000252108 ZNF496Q96IT1 587 aaPredicted RBP4.93□□□□□ -1.62
UBE4A-201ENST00000252108 ZMYND15Q9H091 742 aa4.93□□□□□ -1.62
UBE4A-201ENST00000252108 RBSNQ9H1K0 784 aa4.93□□□□□ -1.62
UBE4A-201ENST00000252108 ANO2Q9NQ90 1003 aa4.93□□□□□ -1.62
UBE4A-201ENST00000252108 MYH13Q9UKX3 1938 aa4.93□□□□□ -1.62
UBE4A-201ENST00000252108 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.93□□□□□ -1.62
UBE4A-201ENST00000252108 SLC4A9Q96Q91 983 aa4.93□□□□□ -1.62
UBE4A-201ENST00000252108 TAF1P21675 1872 aa4.92□□□□□ -1.62
UBE4A-201ENST00000252108 KRT28Q7Z3Y7 464 aa4.92□□□□□ -1.62
UBE4A-201ENST00000252108 ISCA1Q9BUE6 129 aa4.92□□□□□ -1.62
UBE4A-201ENST00000252108 GRM8O00222 908 aa4.92□□□□□ -1.62
UBE4A-201ENST00000252108 CWF19L2Q2TBE0 894 aaKnown RBP4.92□□□□□ -1.62
UBE4A-201ENST00000252108 MPRIPQ6WCQ1 1025 aa4.92□□□□□ -1.62
UBE4A-201ENST00000252108 SMARCC2Q8TAQ2 1214 aa4.92□□□□□ -1.62
UBE4A-201ENST00000252108 USP25Q9UHP3 1055 aa4.92□□□□□ -1.62
UBE4A-201ENST00000252108 DBNLQ9UJU6 430 aaKnown RBP4.92□□□□□ -1.62
UBE4A-201ENST00000252108 UBR3Q6ZT12 1888 aa4.92□□□□□ -1.62
UBE4A-201ENST00000252108 BTAF1O14981 1849 aa4.92□□□□□ -1.62
UBE4A-201ENST00000252108 MYH2Q9UKX2 1941 aa4.92□□□□□ -1.62
UBE4A-201ENST00000252108 UBE2HP62256 183 aa4.92□□□□□ -1.62
UBE4A-201ENST00000252108 NUTM2GQ5VZR2 741 aa4.92□□□□□ -1.62
UBE4A-201ENST00000252108 NKX2-3Q8TAU0 364 aa4.92□□□□□ -1.62
UBE4A-201ENST00000252108 CCDC34Q96HJ3 373 aa4.92□□□□□ -1.62
UBE4A-201ENST00000252108 BICC1Q9H694 974 aaKnown RBP4.92□□□□□ -1.62
UBE4A-201ENST00000252108 MTMR6Q9Y217 621 aa4.92□□□□□ -1.62
UBE4A-201ENST00000252108 MAP3K2Q9Y2U5 619 aa4.92□□□□□ -1.62
UBE4A-201ENST00000252108 ELP1O95163 1332 aa4.92□□□□□ -1.62
UBE4A-201ENST00000252108 BTBD11A6QL63 1104 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms