RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 ARFGEF2Q9Y6D5 1785 aa20.38■□□□□ 0.85
FOXA1-201ENST00000250448 KCNQ4P56696 695 aa20.38■□□□□ 0.85
FOXA1-201ENST00000250448 EPHA10Q5JZY3 1008 aa20.38■□□□□ 0.85
FOXA1-201ENST00000250448 ZBTB1Q9Y2K1 713 aa20.38■□□□□ 0.85
FOXA1-201ENST00000250448 EP400Q96L91 3159 aa20.38■□□□□ 0.85
FOXA1-201ENST00000250448 UQCRHLA0A096LP55 91 aa20.38■□□□□ 0.85
FOXA1-201ENST00000250448 STARD3NLO95772 234 aa20.38■□□□□ 0.85
FOXA1-201ENST00000250448 UQCRHP07919 91 aa20.38■□□□□ 0.85
FOXA1-201ENST00000250448 PHF14O94880 888 aa20.37■□□□□ 0.85
FOXA1-201ENST00000250448 CYP19A1P11511 503 aaPredicted RBP20.37■□□□□ 0.85
FOXA1-201ENST00000250448 POLA2Q14181 598 aa20.37■□□□□ 0.85
FOXA1-201ENST00000250448 WDR33Q9C0J8 1336 aaKnown RBP20.37■□□□□ 0.85
FOXA1-201ENST00000250448 A0A087WZG4 1122 aa20.36■□□□□ 0.85
FOXA1-201ENST00000250448 EPB41L2O43491 1005 aaKnown RBP20.36■□□□□ 0.85
FOXA1-201ENST00000250448 GADD45BO75293 160 aaPredicted RBP20.36■□□□□ 0.85
FOXA1-201ENST00000250448 PAXIP1Q6ZW49 1069 aaPredicted RBP20.36■□□□□ 0.85
FOXA1-201ENST00000250448 KLHDC4Q8TBB5 520 aa20.36■□□□□ 0.85
FOXA1-201ENST00000250448 AFDNP55196 1824 aaKnown RBP20.35■□□□□ 0.85
FOXA1-201ENST00000250448 PTMAP06454 111 aaKnown RBP20.35■□□□□ 0.85
FOXA1-201ENST00000250448 GDPD2Q9HCC8 539 aa20.35■□□□□ 0.85
FOXA1-201ENST00000250448 FOXD4L6Q3SYB3 417 aaPredicted RBP20.35■□□□□ 0.85
FOXA1-201ENST00000250448 FOXD4L3Q6VB84 417 aaPredicted RBP20.35■□□□□ 0.85
FOXA1-201ENST00000250448 MAP7D2Q96T17 732 aa20.35■□□□□ 0.85
FOXA1-201ENST00000250448 TEX13AQ9BXU3 409 aaPredicted RBP20.35■□□□□ 0.85
FOXA1-201ENST00000250448 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.35■□□□□ 0.85
FOXA1-201ENST00000250448 ATP6V1AP38606 617 aa20.34■□□□□ 0.85
FOXA1-201ENST00000250448 UTYO14607 1347 aa20.34■□□□□ 0.85
FOXA1-201ENST00000250448 HSPA4P34932 840 aa20.34■□□□□ 0.85
FOXA1-201ENST00000250448 USP48Q86UV5 1035 aa20.34■□□□□ 0.85
FOXA1-201ENST00000250448 IL25Q9H293 177 aa20.34■□□□□ 0.85
FOXA1-201ENST00000250448 RPAP1Q9BWH6 1393 aaPredicted RBP20.34■□□□□ 0.85
FOXA1-201ENST00000250448 FAM13BQ9NYF5 915 aa20.33■□□□□ 0.85
FOXA1-201ENST00000250448 TCHHQ07283 1943 aa20.33■□□□□ 0.85
FOXA1-201ENST00000250448 SASS6Q6UVJ0 657 aa20.33■□□□□ 0.84
FOXA1-201ENST00000250448 GJD4Q96KN9 370 aaPredicted RBP20.33■□□□□ 0.84
FOXA1-201ENST00000250448 SIL1Q9H173 461 aa20.33■□□□□ 0.84
FOXA1-201ENST00000250448 LOC102724428A0A0B4J2F2 783 aa20.32■□□□□ 0.84
FOXA1-201ENST00000250448 SIK1P57059 783 aa20.32■□□□□ 0.84
FOXA1-201ENST00000250448 OS9Q13438 667 aaPredicted RBP20.32■□□□□ 0.84
FOXA1-201ENST00000250448 ITPK1Q13572 414 aa20.32■□□□□ 0.84
FOXA1-201ENST00000250448 NUTM1Q86Y26 1132 aa20.32■□□□□ 0.84
FOXA1-201ENST00000250448 TBC1D2BQ9UPU7 963 aa20.32■□□□□ 0.84
FOXA1-201ENST00000250448 HLFQ16534 295 aa20.32■□□□□ 0.84
FOXA1-201ENST00000250448 TMEM87AQ8NBN3 555 aa20.32■□□□□ 0.84
FOXA1-201ENST00000250448 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.32■□□□□ 0.84
FOXA1-201ENST00000250448 PALLDQ8WX93 1383 aa20.31■□□□□ 0.84
FOXA1-201ENST00000250448 DYNC1I1O14576 645 aa20.31■□□□□ 0.84
FOXA1-201ENST00000250448 KIAA2012Q0VF49 1180 aa20.31■□□□□ 0.84
FOXA1-201ENST00000250448 FAM184AQ8NB25 1140 aa20.31■□□□□ 0.84
FOXA1-201ENST00000250448 GPTP24298 496 aa20.31■□□□□ 0.84
FOXA1-201ENST00000250448 RAD50Q92878 1312 aa20.3■□□□□ 0.84
FOXA1-201ENST00000250448 NUP188Q5SRE5 1749 aa20.3■□□□□ 0.84
FOXA1-201ENST00000250448 MTX1Q13505 466 aa20.3■□□□□ 0.84
FOXA1-201ENST00000250448 KIF6Q6ZMV9 814 aa20.3■□□□□ 0.84
FOXA1-201ENST00000250448 RHPN1Q8TCX5 695 aa20.3■□□□□ 0.84
FOXA1-201ENST00000250448 UVSSAQ2YD98 709 aa20.3■□□□□ 0.84
FOXA1-201ENST00000250448 CWC25Q9NXE8 425 aaPredicted RBP20.3■□□□□ 0.84
FOXA1-201ENST00000250448 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.3■□□□□ 0.84
FOXA1-201ENST00000250448 TJP1Q07157 1748 aa20.29■□□□□ 0.84
FOXA1-201ENST00000250448 CCDC183Q5T5S1 534 aa20.29■□□□□ 0.84
FOXA1-201ENST00000250448 SMIM5Q71RC9 77 aa20.29■□□□□ 0.84
FOXA1-201ENST00000250448 CRKLP46109 303 aaKnown RBP20.28■□□□□ 0.84
FOXA1-201ENST00000250448 CASP7P55210 303 aa20.28■□□□□ 0.84
FOXA1-201ENST00000250448 CHMP3Q9Y3E7 222 aa20.28■□□□□ 0.84
FOXA1-201ENST00000250448 RAB11FIP3O75154 756 aa20.28■□□□□ 0.84
FOXA1-201ENST00000250448 SGSM2O43147 1006 aa20.28■□□□□ 0.84
FOXA1-201ENST00000250448 SYNE4Q8N205 404 aa20.28■□□□□ 0.84
FOXA1-201ENST00000250448 MAP4K4O95819 1239 aaPredicted RBP20.27■□□□□ 0.84
FOXA1-201ENST00000250448 TCIRG1Q13488 830 aa20.27■□□□□ 0.84
FOXA1-201ENST00000250448 INTS5Q6P9B9 1019 aaKnown RBP20.27■□□□□ 0.84
FOXA1-201ENST00000250448 QTRT2Q9H974 415 aaKnown RBP20.27■□□□□ 0.84
FOXA1-201ENST00000250448 CNPY2Q9Y2B0 182 aa20.27■□□□□ 0.84
FOXA1-201ENST00000250448 SNX14Q9Y5W7 946 aa20.27■□□□□ 0.84
FOXA1-201ENST00000250448 PI4K2BQ8TCG2 481 aa20.27■□□□□ 0.83
FOXA1-201ENST00000250448 TTC14Q96N46 770 aa20.27■□□□□ 0.83
FOXA1-201ENST00000250448 ZSCAN22P10073 491 aaPredicted RBP20.26■□□□□ 0.83
FOXA1-201ENST00000250448 HDAC5Q9UQL6 1122 aa20.26■□□□□ 0.83
FOXA1-201ENST00000250448 MAP3K15Q6ZN16 1313 aa20.26■□□□□ 0.83
FOXA1-201ENST00000250448 LMBR1LQ6UX01 489 aa20.26■□□□□ 0.83
FOXA1-201ENST00000250448 DHX37Q8IY37 1157 aaKnown RBP20.26■□□□□ 0.83
FOXA1-201ENST00000250448 SEPT12Q8IYM1 358 aa20.26■□□□□ 0.83
FOXA1-201ENST00000250448 CCDC85AQ96PX6 553 aaPredicted RBP20.26■□□□□ 0.83
FOXA1-201ENST00000250448 H7C1W4 665 aa20.25■□□□□ 0.83
FOXA1-201ENST00000250448 DZIP3Q86Y13 1208 aaKnown RBP20.25■□□□□ 0.83
FOXA1-201ENST00000250448 KIF1BPQ96EK5 621 aa20.25■□□□□ 0.83
FOXA1-201ENST00000250448 FAM89AQ96GI7 184 aa20.25■□□□□ 0.83
FOXA1-201ENST00000250448 USP25Q9UHP3 1055 aa20.25■□□□□ 0.83
FOXA1-201ENST00000250448 MTERF4Q7Z6M4 381 aaKnown RBP20.25■□□□□ 0.83
FOXA1-201ENST00000250448 LSG1Q9H089 658 aaKnown RBP20.25■□□□□ 0.83
FOXA1-201ENST00000250448 CCDC87Q9NVE4 849 aa20.25■□□□□ 0.83
FOXA1-201ENST00000250448 TRPC5Q9UL62 973 aaPredicted RBP20.25■□□□□ 0.83
FOXA1-201ENST00000250448 AK2P54819 239 aa20.24■□□□□ 0.83
FOXA1-201ENST00000250448 CCDC191Q8NCU4 936 aa20.24■□□□□ 0.83
FOXA1-201ENST00000250448 ISCA1Q9BUE6 129 aa20.24■□□□□ 0.83
FOXA1-201ENST00000250448 MYH14Q7Z406 1995 aaKnown RBP20.24■□□□□ 0.83
FOXA1-201ENST00000250448 LETM1O95202 739 aaPredicted RBP20.24■□□□□ 0.83
FOXA1-201ENST00000250448 FAM177BA6PVY3 158 aa20.23■□□□□ 0.83
FOXA1-201ENST00000250448 STX6O43752 255 aa20.23■□□□□ 0.83
FOXA1-201ENST00000250448 SASH1O94885 1247 aa20.23■□□□□ 0.83
FOXA1-201ENST00000250448 UBE2HP62256 183 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms