RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 MAP4K4O95819 1239 aaPredicted RBP28.51■■■□□ 2.15
SYNGR3-201ENST00000248121 PROM2Q8N271 834 aa28.51■■■□□ 2.15
SYNGR3-201ENST00000248121 COPRSQ9NQ92 184 aa28.51■■■□□ 2.15
SYNGR3-201ENST00000248121 PHF14O94880 888 aa28.5■■■□□ 2.15
SYNGR3-201ENST00000248121 CD2BP2O95400 341 aaKnown RBP28.5■■■□□ 2.15
SYNGR3-201ENST00000248121 EAF2Q96CJ1 260 aaPredicted RBP28.5■■■□□ 2.15
SYNGR3-201ENST00000248121 NIP7Q9Y221 180 aaKnown RBP eCLIP28.5■■■□□ 2.15
SYNGR3-201ENST00000248121 CASZ1Q86V15 1759 aa28.5■■■□□ 2.15
SYNGR3-201ENST00000248121 CDHR2Q9BYE9 1310 aa28.5■■■□□ 2.15
SYNGR3-201ENST00000248121 HSCBQ8IWL3 235 aa28.5■■■□□ 2.15
SYNGR3-201ENST00000248121 ZNF594Q96JF6 807 aaPredicted RBP28.5■■■□□ 2.15
SYNGR3-201ENST00000248121 USPL1Q5W0Q7 1092 aa28.49■■■□□ 2.15
SYNGR3-201ENST00000248121 AACSQ86V21 672 aa28.49■■■□□ 2.15
SYNGR3-201ENST00000248121 RTCBQ9Y3I0 505 aaKnown RBP28.49■■■□□ 2.15
SYNGR3-201ENST00000248121 PLA2G12BQ9BX93 195 aa28.48■■■□□ 2.15
SYNGR3-201ENST00000248121 LAMB2P55268 1798 aa28.48■■■□□ 2.15
SYNGR3-201ENST00000248121 IRS4O14654 1257 aaPredicted RBP28.47■■■□□ 2.15
SYNGR3-201ENST00000248121 ARHGEF1Q92888 912 aaKnown RBP28.47■■■□□ 2.15
SYNGR3-201ENST00000248121 ECHDC1Q9NTX5 307 aa28.47■■■□□ 2.15
SYNGR3-201ENST00000248121 GLRX3O76003 335 aaKnown RBP28.47■■■□□ 2.15
SYNGR3-201ENST00000248121 IFIT2P09913 472 aaKnown RBP28.47■■■□□ 2.15
SYNGR3-201ENST00000248121 SPRYD3Q8NCJ5 442 aa28.47■■■□□ 2.15
SYNGR3-201ENST00000248121 IL25Q9H293 177 aa28.47■■■□□ 2.15
SYNGR3-201ENST00000248121 NTSR2O95665 410 aa28.46■■■□□ 2.15
SYNGR3-201ENST00000248121 NFKBIBQ15653 356 aa28.46■■■□□ 2.15
SYNGR3-201ENST00000248121 TBC1D9BQ66K14 1250 aa28.46■■■□□ 2.15
SYNGR3-201ENST00000248121 AK7Q96M32 723 aa28.46■■■□□ 2.15
SYNGR3-201ENST00000248121 NARFQ9UHQ1 456 aa28.46■■■□□ 2.15
SYNGR3-201ENST00000248121 COL24A1Q17RW2 1714 aa28.45■■■□□ 2.15
SYNGR3-201ENST00000248121 BICDL1Q6ZP65 573 aa28.45■■■□□ 2.14
SYNGR3-201ENST00000248121 TLR7Q9NYK1 1049 aaKnown RBP28.45■■■□□ 2.14
SYNGR3-201ENST00000248121 HCLS1P14317 486 aaPredicted RBP28.44■■■□□ 2.14
SYNGR3-201ENST00000248121 TXNRD1Q16881 649 aa28.44■■■□□ 2.14
SYNGR3-201ENST00000248121 CCDC8Q9H0W5 538 aaPredicted RBP28.44■■■□□ 2.14
SYNGR3-201ENST00000248121 CSF1RP07333 972 aa28.44■■■□□ 2.14
SYNGR3-201ENST00000248121 ZNF652Q9Y2D9 606 aa28.44■■■□□ 2.14
SYNGR3-201ENST00000248121 CNTROBQ8N137 903 aa28.43■■■□□ 2.14
SYNGR3-201ENST00000248121 TTLL11Q8NHH1 800 aa28.43■■■□□ 2.14
SYNGR3-201ENST00000248121 UTP14AQ9BVJ6 771 aaKnown RBP28.43■■■□□ 2.14
SYNGR3-201ENST00000248121 GREM2Q9H772 168 aa28.43■■■□□ 2.14
SYNGR3-201ENST00000248121 CTSWP56202 376 aa28.42■■■□□ 2.14
SYNGR3-201ENST00000248121 LRRC24Q50LG9 513 aa28.42■■■□□ 2.14
SYNGR3-201ENST00000248121 SLC27A3Q5K4L6 730 aa28.42■■■□□ 2.14
SYNGR3-201ENST00000248121 CLEC4GQ6UXB4 293 aa28.42■■■□□ 2.14
SYNGR3-201ENST00000248121 PUS3Q9BZE2 481 aaKnown RBP28.42■■■□□ 2.14
SYNGR3-201ENST00000248121 APBA3O96018 575 aa28.42■■■□□ 2.14
SYNGR3-201ENST00000248121 TFCP2Q12800 502 aa28.42■■■□□ 2.14
SYNGR3-201ENST00000248121 RABEP1Q15276 862 aa28.42■■■□□ 2.14
SYNGR3-201ENST00000248121 ATG9AQ7Z3C6 839 aa28.42■■■□□ 2.14
SYNGR3-201ENST00000248121 SH3TC1Q8TE82 1336 aa28.42■■■□□ 2.14
SYNGR3-201ENST00000248121 PARP10Q53GL7 1025 aa28.41■■■□□ 2.14
SYNGR3-201ENST00000248121 COL4A1P02462 1669 aa28.41■■■□□ 2.14
SYNGR3-201ENST00000248121 GPATCH3Q96I76 525 aa28.41■■■□□ 2.14
SYNGR3-201ENST00000248121 SPEF2Q9C093 1822 aa28.4■■■□□ 2.14
SYNGR3-201ENST00000248121 PDE8AO60658 829 aa28.39■■■□□ 2.14
SYNGR3-201ENST00000248121 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.39■■■□□ 2.13
SYNGR3-201ENST00000248121 ZPR1O75312 459 aa28.39■■■□□ 2.13
SYNGR3-201ENST00000248121 CCDC57Q2TAC2 916 aa28.38■■■□□ 2.13
SYNGR3-201ENST00000248121 TRAPPC3LQ5T215 181 aa28.38■■■□□ 2.13
SYNGR3-201ENST00000248121 ANO2Q9NQ90 1003 aa28.38■■■□□ 2.13
SYNGR3-201ENST00000248121 ITGA6P23229 1130 aa28.38■■■□□ 2.13
SYNGR3-201ENST00000248121 TAF1P21675 1872 aa28.37■■■□□ 2.13
SYNGR3-201ENST00000248121 K7ELQ4 463 aaPredicted RBP28.37■■■□□ 2.13
SYNGR3-201ENST00000248121 RFC4P35249 363 aa28.36■■■□□ 2.13
SYNGR3-201ENST00000248121 ERFEQ4G0M1 354 aa28.36■■■□□ 2.13
SYNGR3-201ENST00000248121 TNNI3KQ59H18 835 aa28.36■■■□□ 2.13
SYNGR3-201ENST00000248121 FPGT-TNNI3KV9GXZ4 949 aa28.36■■■□□ 2.13
SYNGR3-201ENST00000248121 ABCC12Q96J65 1359 aa28.36■■■□□ 2.13
SYNGR3-201ENST00000248121 SGSM2O43147 1006 aa28.36■■■□□ 2.13
SYNGR3-201ENST00000248121 DDIT3P35638 169 aa28.36■■■□□ 2.13
SYNGR3-201ENST00000248121 ZNF827Q17R98 1081 aa28.36■■■□□ 2.13
SYNGR3-201ENST00000248121 LRP5O75197 1615 aa28.35■■■□□ 2.13
SYNGR3-201ENST00000248121 EYA2O00167 538 aa28.35■■■□□ 2.13
SYNGR3-201ENST00000248121 PLSCR1O15162 318 aa28.35■■■□□ 2.13
SYNGR3-201ENST00000248121 IFIT5Q13325 482 aaKnown RBP28.35■■■□□ 2.13
SYNGR3-201ENST00000248121 C3orf67Q6ZVT6 689 aa28.35■■■□□ 2.13
SYNGR3-201ENST00000248121 DBNLQ9UJU6 430 aaKnown RBP28.35■■■□□ 2.13
SYNGR3-201ENST00000248121 FRAT2O75474 233 aaPredicted RBP28.34■■■□□ 2.13
SYNGR3-201ENST00000248121 PALD1Q9ULE6 856 aa28.34■■■□□ 2.13
SYNGR3-201ENST00000248121 CCDC24Q8N4L8 307 aa28.34■■■□□ 2.13
SYNGR3-201ENST00000248121 EVI5LQ96CN4 794 aa28.33■■■□□ 2.13
SYNGR3-201ENST00000248121 RIC1Q4ADV7 1423 aa28.33■■■□□ 2.13
SYNGR3-201ENST00000248121 RGPD3A6NKT7 1758 aaPredicted RBP28.32■■■□□ 2.12
SYNGR3-201ENST00000248121 RGPD4Q7Z3J3 1758 aa28.32■■■□□ 2.12
SYNGR3-201ENST00000248121 TNRC6CQ9HCJ0 1690 aaKnown RBP28.32■■■□□ 2.12
SYNGR3-201ENST00000248121 CWC27Q6UX04 472 aaKnown RBP28.31■■■□□ 2.12
SYNGR3-201ENST00000248121 BOLA2Q9H3K6 86 aa28.31■■■□□ 2.12
SYNGR3-201ENST00000248121 SEC31BQ9NQW1 1179 aa28.31■■■□□ 2.12
SYNGR3-201ENST00000248121 RGL2O15211 777 aa28.31■■■□□ 2.12
SYNGR3-201ENST00000248121 EPB41L2O43491 1005 aaKnown RBP28.31■■■□□ 2.12
SYNGR3-201ENST00000248121 ZNF609O15014 1411 aa28.3■■■□□ 2.12
SYNGR3-201ENST00000248121 CIAO1O76071 339 aa28.3■■■□□ 2.12
SYNGR3-201ENST00000248121 IL15P40933 162 aaPredicted RBP28.3■■■□□ 2.12
SYNGR3-201ENST00000248121 TAF7LQ5H9L4 462 aa28.3■■■□□ 2.12
SYNGR3-201ENST00000248121 IL17RAQ96F46 866 aa28.3■■■□□ 2.12
SYNGR3-201ENST00000248121 SETDB2Q96T68 719 aa28.3■■■□□ 2.12
SYNGR3-201ENST00000248121 ANKRD18BA2A2Z9 1011 aa28.3■■■□□ 2.12
SYNGR3-201ENST00000248121 LSG1Q9H089 658 aaKnown RBP28.3■■■□□ 2.12
SYNGR3-201ENST00000248121 CHMP5Q9NZZ3 219 aa28.3■■■□□ 2.12
SYNGR3-201ENST00000248121 ADRA2BP18089 450 aa28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms