RNA–Protein interactions for RNA: ENST00000243040.10

PFDN5-201, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-201ENST00000243040 CC2D2BQ6DHV5 1058 aa13.51□□□□□ -0.25
PFDN5-201ENST00000243040 DDX46Q7L014 1031 aaKnown RBP13.51□□□□□ -0.25
PFDN5-201ENST00000243040 GRAPLQ8TC17 118 aaPredicted RBP13.51□□□□□ -0.25
PFDN5-201ENST00000243040 RTL9Q8NET4 1388 aa13.5□□□□□ -0.25
PFDN5-201ENST00000243040 ALDH1L1O75891 902 aa13.5□□□□□ -0.25
PFDN5-201ENST00000243040 PRELPP51888 382 aa13.5□□□□□ -0.25
PFDN5-201ENST00000243040 GRIPAP1Q4V328 841 aa13.5□□□□□ -0.25
PFDN5-201ENST00000243040 RTKN2Q8IZC4 609 aa13.5□□□□□ -0.25
PFDN5-201ENST00000243040 PLA2G12BQ9BX93 195 aa13.5□□□□□ -0.25
PFDN5-201ENST00000243040 TAOK3Q9H2K8 898 aa13.5□□□□□ -0.25
PFDN5-201ENST00000243040 ZNF219Q9P2Y4 722 aaPredicted RBP13.5□□□□□ -0.25
PFDN5-201ENST00000243040 A0A1B0GUL6 1792 aa13.5□□□□□ -0.25
PFDN5-201ENST00000243040 DUOX1Q9NRD9 1551 aa13.49□□□□□ -0.25
PFDN5-201ENST00000243040 KIF16BQ96L93 1317 aa13.49□□□□□ -0.25
PFDN5-201ENST00000243040 BBOX1O75936 387 aa13.49□□□□□ -0.25
PFDN5-201ENST00000243040 LMNB1P20700 586 aa13.49□□□□□ -0.25
PFDN5-201ENST00000243040 CTSWP56202 376 aa13.49□□□□□ -0.25
PFDN5-201ENST00000243040 FKBP4Q02790 459 aaKnown RBP eCLIP13.49□□□□□ -0.25
PFDN5-201ENST00000243040 CCDC152Q4G0S7 254 aa13.49□□□□□ -0.25
PFDN5-201ENST00000243040 C9orf131Q5VYM1 1079 aa13.49□□□□□ -0.25
PFDN5-201ENST00000243040 UBE3BQ7Z3V4 1068 aa13.49□□□□□ -0.25
PFDN5-201ENST00000243040 TMC4Q7Z404 712 aa13.49□□□□□ -0.25
PFDN5-201ENST00000243040 SRCIN1Q9C0H9 1055 aa13.49□□□□□ -0.25
PFDN5-201ENST00000243040 OLFM4Q6UX06 510 aa13.48□□□□□ -0.25
PFDN5-201ENST00000243040 ZNF784Q8NCA9 323 aaPredicted RBP13.48□□□□□ -0.25
PFDN5-201ENST00000243040 JARID2Q92833 1246 aaPredicted RBP13.48□□□□□ -0.25
PFDN5-201ENST00000243040 PSMD1Q99460 953 aa13.48□□□□□ -0.25
PFDN5-201ENST00000243040 RNF181Q9P0P0 153 aa13.48□□□□□ -0.25
PFDN5-201ENST00000243040 ATP6V0A2Q9Y487 856 aa13.48□□□□□ -0.25
PFDN5-201ENST00000243040 GRM8O00222 908 aa13.47□□□□□ -0.25
PFDN5-201ENST00000243040 SLC4A10Q6U841 1118 aa13.47□□□□□ -0.25
PFDN5-201ENST00000243040 SP8Q8IXZ3 490 aa13.47□□□□□ -0.25
PFDN5-201ENST00000243040 CELF1Q92879 486 aaKnown RBP13.47□□□□□ -0.25
PFDN5-201ENST00000243040 UTYO14607 1347 aa13.46□□□□□ -0.25
PFDN5-201ENST00000243040 TTLL11Q8NHH1 800 aa13.46□□□□□ -0.25
PFDN5-201ENST00000243040 ARHGAP45Q92619 1136 aa13.46□□□□□ -0.25
PFDN5-201ENST00000243040 API5Q9BZZ5 524 aaKnown RBP13.46□□□□□ -0.25
PFDN5-201ENST00000243040 WDR90Q96KV7 1748 aa13.45□□□□□ -0.26
PFDN5-201ENST00000243040 CSF1RP07333 972 aa13.45□□□□□ -0.26
PFDN5-201ENST00000243040 SLC51AQ86UW1 340 aa13.45□□□□□ -0.26
PFDN5-201ENST00000243040 TMX4Q9H1E5 349 aaPredicted RBP13.45□□□□□ -0.26
PFDN5-201ENST00000243040 SEC31BQ9NQW1 1179 aa13.45□□□□□ -0.26
PFDN5-201ENST00000243040 NOB1Q9ULX3 412 aaKnown RBP13.45□□□□□ -0.26
PFDN5-201ENST00000243040 COL4A5P29400 1685 aa13.44□□□□□ -0.26
PFDN5-201ENST00000243040 IARSP41252 1262 aaKnown RBP13.44□□□□□ -0.26
PFDN5-201ENST00000243040 RPS8P62241 208 aaKnown RBP13.44□□□□□ -0.26
PFDN5-201ENST00000243040 RTFDC1Q9BY42 306 aaPredicted RBP13.44□□□□□ -0.26
PFDN5-201ENST00000243040 GREM2Q9H772 168 aa13.44□□□□□ -0.26
PFDN5-201ENST00000243040 C9orf78Q9NZ63 289 aaPredicted RBP13.44□□□□□ -0.26
PFDN5-201ENST00000243040 BCAR3O75815 825 aa13.43□□□□□ -0.26
PFDN5-201ENST00000243040 CCT4P50991 539 aaKnown RBP13.43□□□□□ -0.26
PFDN5-201ENST00000243040 FOXO4P98177 505 aa13.43□□□□□ -0.26
PFDN5-201ENST00000243040 CDC5LQ99459 802 aaKnown RBP13.43□□□□□ -0.26
PFDN5-201ENST00000243040 VPS33BQ9H267 617 aa13.43□□□□□ -0.26
PFDN5-201ENST00000243040 ZNF277Q9NRM2 450 aaPredicted RBP13.43□□□□□ -0.26
PFDN5-201ENST00000243040 PSME4Q14997 1843 aa13.42□□□□□ -0.26
PFDN5-201ENST00000243040 NBPF7P0C2Y1 421 aaPredicted RBP13.42□□□□□ -0.26
PFDN5-201ENST00000243040 FAM161AQ3B820 660 aa13.42□□□□□ -0.26
PFDN5-201ENST00000243040 ANKRD18AQ8IVF6 992 aa13.42□□□□□ -0.26
PFDN5-201ENST00000243040 MPNDQ8N594 471 aa13.42□□□□□ -0.26
PFDN5-201ENST00000243040 SUPT20HQ8NEM7 779 aa13.42□□□□□ -0.26
PFDN5-201ENST00000243040 CCDC85AQ96PX6 553 aaPredicted RBP13.42□□□□□ -0.26
PFDN5-201ENST00000243040 SCN4AP35499 1836 aa13.41□□□□□ -0.26
PFDN5-201ENST00000243040 IPO8O15397 1037 aaKnown RBP13.41□□□□□ -0.26
PFDN5-201ENST00000243040 TRIM27P14373 513 aa13.41□□□□□ -0.26
PFDN5-201ENST00000243040 ITGA6P23229 1130 aa13.41□□□□□ -0.26
PFDN5-201ENST00000243040 DPP8Q6V1X1 898 aaPredicted RBP13.41□□□□□ -0.26
PFDN5-201ENST00000243040 ATF7IPQ6VMQ6 1270 aa13.41□□□□□ -0.26
PFDN5-201ENST00000243040 KAZALD1Q96I82 304 aa13.41□□□□□ -0.26
PFDN5-201ENST00000243040 SUCLG2Q96I99 432 aa13.41□□□□□ -0.26
PFDN5-201ENST00000243040 PODXL2Q9NZ53 605 aa13.41□□□□□ -0.26
PFDN5-201ENST00000243040 KDM2BQ8NHM5 1336 aa13.4□□□□□ -0.26
PFDN5-201ENST00000243040 GLTPD2A6NH11 291 aa13.4□□□□□ -0.26
PFDN5-201ENST00000243040 RABL6Q3YEC7 729 aaPredicted RBP13.4□□□□□ -0.26
PFDN5-201ENST00000243040 EPHA10Q5JZY3 1008 aa13.4□□□□□ -0.26
PFDN5-201ENST00000243040 INTS3Q68E01 1043 aaKnown RBP13.4□□□□□ -0.26
PFDN5-201ENST00000243040 USP44Q9H0E7 712 aa13.4□□□□□ -0.26
PFDN5-201ENST00000243040 GPBP1L1Q9HC44 474 aaPredicted RBP13.4□□□□□ -0.26
PFDN5-201ENST00000243040 BSDC1Q9NW68 430 aaPredicted RBP13.4□□□□□ -0.26
PFDN5-201ENST00000243040 ANKRD18BA2A2Z9 1011 aa13.39□□□□□ -0.27
PFDN5-201ENST00000243040 FZD9O00144 591 aa13.39□□□□□ -0.27
PFDN5-201ENST00000243040 IGHMBP2P38935 993 aaKnown RBP13.39□□□□□ -0.27
PFDN5-201ENST00000243040 GPSM2P81274 684 aa13.39□□□□□ -0.27
PFDN5-201ENST00000243040 KIAA2012Q0VF49 1180 aa13.39□□□□□ -0.27
PFDN5-201ENST00000243040 LMBR1LQ6UX01 489 aa13.39□□□□□ -0.27
PFDN5-201ENST00000243040 PPIP5K2O43314 1243 aa13.38□□□□□ -0.27
PFDN5-201ENST00000243040 IFIT5Q13325 482 aaKnown RBP13.38□□□□□ -0.27
PFDN5-201ENST00000243040 ZKSCAN2Q63HK3 967 aa13.38□□□□□ -0.27
PFDN5-201ENST00000243040 ZNF526Q8TF50 670 aaPredicted RBP13.38□□□□□ -0.27
PFDN5-201ENST00000243040 JDP2Q8WYK2 163 aa13.38□□□□□ -0.27
PFDN5-201ENST00000243040 FRAT1Q92837 279 aaPredicted RBP13.38□□□□□ -0.27
PFDN5-201ENST00000243040 NSFL1CQ9UNZ2 370 aaKnown RBP13.38□□□□□ -0.27
PFDN5-201ENST00000243040 ZNF646O15015 1829 aaPredicted RBP13.38□□□□□ -0.27
PFDN5-201ENST00000243040 XDHP47989 1333 aa13.38□□□□□ -0.27
PFDN5-201ENST00000243040 AOC3Q16853 763 aa13.37□□□□□ -0.27
PFDN5-201ENST00000243040 DPY19L2Q6NUT2 758 aa13.37□□□□□ -0.27
PFDN5-201ENST00000243040 LARGE2Q8N3Y3 721 aa13.37□□□□□ -0.27
PFDN5-201ENST00000243040 ANKRD44Q8N8A2 993 aa13.37□□□□□ -0.27
PFDN5-201ENST00000243040 TBC1D16Q8TBP0 767 aa13.37□□□□□ -0.27
PFDN5-201ENST00000243040 BICC1Q9H694 974 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms