RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 STYK1Q6J9G0 422 aa25.29■■□□□ 1.64
RHBDD3-201ENST00000216085 DDX46Q7L014 1031 aaKnown RBP25.29■■□□□ 1.64
RHBDD3-201ENST00000216085 ZNF622Q969S3 477 aaKnown RBP eCLIP25.28■■□□□ 1.64
RHBDD3-201ENST00000216085 CHMP3Q9Y3E7 222 aa25.28■■□□□ 1.64
RHBDD3-201ENST00000216085 A0A0G2JLW4 131 aa25.28■■□□□ 1.64
RHBDD3-201ENST00000216085 ALDH1B1P30837 517 aa25.28■■□□□ 1.64
RHBDD3-201ENST00000216085 CNKSR1Q969H4 720 aa25.28■■□□□ 1.64
RHBDD3-201ENST00000216085 LRRFIP2Q9Y608 721 aaKnown RBP25.28■■□□□ 1.64
RHBDD3-201ENST00000216085 C3orf67Q6ZVT6 689 aa25.27■■□□□ 1.64
RHBDD3-201ENST00000216085 NLGN2Q8NFZ4 835 aa25.27■■□□□ 1.64
RHBDD3-201ENST00000216085 TTLL11Q8NHH1 800 aa25.27■■□□□ 1.64
RHBDD3-201ENST00000216085 BICC1Q9H694 974 aaKnown RBP25.27■■□□□ 1.64
RHBDD3-201ENST00000216085 PIM2Q9P1W9 311 aa25.27■■□□□ 1.64
RHBDD3-201ENST00000216085 COL11A2P13942 1736 aaPredicted RBP25.27■■□□□ 1.64
RHBDD3-201ENST00000216085 RTL9Q8NET4 1388 aa25.26■■□□□ 1.63
RHBDD3-201ENST00000216085 DLEC1Q9Y238 1755 aa25.26■■□□□ 1.63
RHBDD3-201ENST00000216085 HOXA10P31260 410 aaPredicted RBP25.26■■□□□ 1.63
RHBDD3-201ENST00000216085 FOXO4P98177 505 aa25.26■■□□□ 1.63
RHBDD3-201ENST00000216085 LMBR1LQ6UX01 489 aa25.26■■□□□ 1.63
RHBDD3-201ENST00000216085 CSF1RP07333 972 aa25.25■■□□□ 1.63
RHBDD3-201ENST00000216085 CCDC85AQ96PX6 553 aaPredicted RBP25.25■■□□□ 1.63
RHBDD3-201ENST00000216085 CRAMP1Q96RY5 1269 aa25.25■■□□□ 1.63
RHBDD3-201ENST00000216085 CDC5LQ99459 802 aaKnown RBP25.25■■□□□ 1.63
RHBDD3-201ENST00000216085 KIAA1551Q9HCM1 1747 aa25.25■■□□□ 1.63
RHBDD3-201ENST00000216085 RABL6Q3YEC7 729 aaPredicted RBP25.24■■□□□ 1.63
RHBDD3-201ENST00000216085 TTLL6Q8N841 843 aa25.24■■□□□ 1.63
RHBDD3-201ENST00000216085 IFIT5Q13325 482 aaKnown RBP25.23■■□□□ 1.63
RHBDD3-201ENST00000216085 CCDC57Q2TAC2 916 aa25.23■■□□□ 1.63
RHBDD3-201ENST00000216085 EPHA10Q5JZY3 1008 aa25.23■■□□□ 1.63
RHBDD3-201ENST00000216085 KAZALD1Q96I82 304 aa25.23■■□□□ 1.63
RHBDD3-201ENST00000216085 FAM161AQ3B820 660 aa25.23■■□□□ 1.63
RHBDD3-201ENST00000216085 CRBNQ96SW2 442 aa25.23■■□□□ 1.63
RHBDD3-201ENST00000216085 GREM2Q9H772 168 aa25.23■■□□□ 1.63
RHBDD3-201ENST00000216085 ANKRD18BA2A2Z9 1011 aa25.22■■□□□ 1.63
RHBDD3-201ENST00000216085 GRAPQ13588 217 aa25.22■■□□□ 1.63
RHBDD3-201ENST00000216085 DALRD3Q5D0E6 543 aaKnown RBP25.22■■□□□ 1.63
RHBDD3-201ENST00000216085 GRAPLQ8TC17 118 aaPredicted RBP25.22■■□□□ 1.63
RHBDD3-201ENST00000216085 TMX4Q9H1E5 349 aaPredicted RBP25.22■■□□□ 1.63
RHBDD3-201ENST00000216085 ZBTB40Q9NUA8 1239 aa25.22■■□□□ 1.63
RHBDD3-201ENST00000216085 KCNA3P22001 575 aa25.21■■□□□ 1.63
RHBDD3-201ENST00000216085 ITGA6P23229 1130 aa25.21■■□□□ 1.63
RHBDD3-201ENST00000216085 AAMPQ13685 434 aa25.21■■□□□ 1.63
RHBDD3-201ENST00000216085 TAF7LQ5H9L4 462 aa25.21■■□□□ 1.63
RHBDD3-201ENST00000216085 ANKRD44Q8N8A2 993 aa25.21■■□□□ 1.63
RHBDD3-201ENST00000216085 BBOX1O75936 387 aa25.2■■□□□ 1.62
RHBDD3-201ENST00000216085 TMC4Q7Z404 712 aa25.2■■□□□ 1.62
RHBDD3-201ENST00000216085 ANKRD18AQ8IVF6 992 aa25.2■■□□□ 1.62
RHBDD3-201ENST00000216085 IGHMBP2P38935 993 aaKnown RBP25.19■■□□□ 1.62
RHBDD3-201ENST00000216085 PRPF40BQ6NWY9 871 aaKnown RBP25.19■■□□□ 1.62
RHBDD3-201ENST00000216085 C1orf115Q9H7X2 142 aa25.19■■□□□ 1.62
RHBDD3-201ENST00000216085 NEFLP07196 543 aa25.18■■□□□ 1.62
RHBDD3-201ENST00000216085 PPEF1O14829 653 aaPredicted RBP25.18■■□□□ 1.62
RHBDD3-201ENST00000216085 MTX1Q13505 466 aa25.18■■□□□ 1.62
RHBDD3-201ENST00000216085 SEC31BQ9NQW1 1179 aa25.18■■□□□ 1.62
RHBDD3-201ENST00000216085 BCS1LQ9Y276 419 aa25.18■■□□□ 1.62
RHBDD3-201ENST00000216085 BRCA1P38398 1863 aaKnown RBP25.17■■□□□ 1.62
RHBDD3-201ENST00000216085 RPS8P62241 208 aaKnown RBP25.17■■□□□ 1.62
RHBDD3-201ENST00000216085 MPHOSPH8Q99549 860 aa25.17■■□□□ 1.62
RHBDD3-201ENST00000216085 SRGAP3O43295 1099 aa25.16■■□□□ 1.62
RHBDD3-201ENST00000216085 SOGA3Q5TF21 947 aa25.16■■□□□ 1.62
RHBDD3-201ENST00000216085 CELF1Q92879 486 aaKnown RBP25.16■■□□□ 1.62
RHBDD3-201ENST00000216085 RPAP2Q8IXW5 612 aaPredicted RBP25.15■■□□□ 1.62
RHBDD3-201ENST00000216085 PELP1Q8IZL8 1130 aaKnown RBP25.15■■□□□ 1.62
RHBDD3-201ENST00000216085 WWC3Q9ULE0 1092 aa25.15■■□□□ 1.62
RHBDD3-201ENST00000216085 DCAF8L1A6NGE4 600 aa25.14■■□□□ 1.62
RHBDD3-201ENST00000216085 HMMRO75330 724 aa25.14■■□□□ 1.62
RHBDD3-201ENST00000216085 CACNA1SQ13698 1873 aa25.14■■□□□ 1.62
RHBDD3-201ENST00000216085 IRX6P78412 446 aaPredicted RBP25.13■■□□□ 1.61
RHBDD3-201ENST00000216085 CC2D2BQ6DHV5 1058 aa25.13■■□□□ 1.61
RHBDD3-201ENST00000216085 CEP85Q6P2H3 762 aa25.13■■□□□ 1.61
RHBDD3-201ENST00000216085 ATP8B2P98198 1209 aa25.13■■□□□ 1.61
RHBDD3-201ENST00000216085 BSDC1Q9NW68 430 aaPredicted RBP25.13■■□□□ 1.61
RHBDD3-201ENST00000216085 GRIPAP1Q4V328 841 aa25.12■■□□□ 1.61
RHBDD3-201ENST00000216085 ATP6V0A2Q9Y487 856 aa25.12■■□□□ 1.61
RHBDD3-201ENST00000216085 GPR162Q16538 588 aa25.11■■□□□ 1.61
RHBDD3-201ENST00000216085 LDHAL6AQ6ZMR3 332 aa25.11■■□□□ 1.61
RHBDD3-201ENST00000216085 EXOC6Q8TAG9 804 aa25.11■■□□□ 1.61
RHBDD3-201ENST00000216085 CNNM1Q9NRU3 951 aa25.11■■□□□ 1.61
RHBDD3-201ENST00000216085 SP8Q8IXZ3 490 aa25.1■■□□□ 1.61
RHBDD3-201ENST00000216085 SLX4Q8IY92 1834 aa25.1■■□□□ 1.61
RHBDD3-201ENST00000216085 C21orf2O43822 256 aa25.1■■□□□ 1.61
RHBDD3-201ENST00000216085 CCDC93Q567U6 631 aa25.1■■□□□ 1.61
RHBDD3-201ENST00000216085 ZNF219Q9P2Y4 722 aaPredicted RBP25.1■■□□□ 1.61
RHBDD3-201ENST00000216085 FBXO3Q9UK99 471 aa25.1■■□□□ 1.61
RHBDD3-201ENST00000216085 ARFGEF1Q9Y6D6 1849 aa25.09■■□□□ 1.61
RHBDD3-201ENST00000216085 ZNF594Q96JF6 807 aaPredicted RBP25.09■■□□□ 1.61
RHBDD3-201ENST00000216085 TAF1P21675 1872 aa25.09■■□□□ 1.61
RHBDD3-201ENST00000216085 PNMA6EA0A0J9YXQ4 647 aa25.08■■□□□ 1.61
RHBDD3-201ENST00000216085 SSH3Q8TE77 659 aa25.08■■□□□ 1.61
RHBDD3-201ENST00000216085 RFX5P48382 616 aaPredicted RBP25.08■■□□□ 1.6
RHBDD3-201ENST00000216085 PTPN12Q05209 780 aaKnown RBP25.08■■□□□ 1.6
RHBDD3-201ENST00000216085 COPRSQ9NQ92 184 aa25.08■■□□□ 1.6
RHBDD3-201ENST00000216085 POLA2Q14181 598 aa25.07■■□□□ 1.6
RHBDD3-201ENST00000216085 RTKN2Q8IZC4 609 aa25.07■■□□□ 1.6
RHBDD3-201ENST00000216085 GOLGB1Q14789 3259 aaKnown RBP25.07■■□□□ 1.6
RHBDD3-201ENST00000216085 SPEF2Q9C093 1822 aa25.07■■□□□ 1.6
RHBDD3-201ENST00000216085 GRIN3BO60391 1043 aa25.06■■□□□ 1.6
RHBDD3-201ENST00000216085 C7orf43Q8WVR3 580 aa25.06■■□□□ 1.6
RHBDD3-201ENST00000216085 ANKRD2Q9GZV1 360 aa25.06■■□□□ 1.6
RHBDD3-201ENST00000216085 KLHDC4Q8TBB5 520 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms