RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 UNC119BA6NIH7 251 aa9.36□□□□□ -0.91
PHGDH-224ENST00000641711 A8MUA0 341 aa9.36□□□□□ -0.91
PHGDH-224ENST00000641711 NPIPA7E9PJI5 369 aa9.36□□□□□ -0.91
PHGDH-224ENST00000641711 SURF4O15260 269 aa9.36□□□□□ -0.91
PHGDH-224ENST00000641711 CHP2O43745 196 aa9.36□□□□□ -0.91
PHGDH-224ENST00000641711 PIP5K1CO60331 668 aa9.36□□□□□ -0.91
PHGDH-224ENST00000641711 RAB36O95755 333 aa9.36□□□□□ -0.91
PHGDH-224ENST00000641711 IGKV1D-16P01601 117 aa9.36□□□□□ -0.91
PHGDH-224ENST00000641711 CLPSP04118 112 aa9.36□□□□□ -0.91
PHGDH-224ENST00000641711 NPIPA8P0DM63 369 aa9.36□□□□□ -0.91
PHGDH-224ENST00000641711 CT45A8P0DMV1 189 aa9.36□□□□□ -0.91
PHGDH-224ENST00000641711 CT45A9P0DMV2 189 aa9.36□□□□□ -0.91
PHGDH-224ENST00000641711 SSTR4P31391 388 aa9.36□□□□□ -0.91
PHGDH-224ENST00000641711 GRK5P34947 590 aa9.36□□□□□ -0.91
PHGDH-224ENST00000641711 OPRL1P41146 370 aa9.36□□□□□ -0.91
PHGDH-224ENST00000641711 CASRP41180 1078 aa9.36□□□□□ -0.91
PHGDH-224ENST00000641711 RBM34P42696 430 aaKnown RBP9.36□□□□□ -0.91
PHGDH-224ENST00000641711 ACAA2P42765 397 aaKnown RBP9.36□□□□□ -0.91
PHGDH-224ENST00000641711 GPR4P46093 362 aa9.36□□□□□ -0.91
PHGDH-224ENST00000641711 TMED10P49755 219 aaKnown RBP9.36□□□□□ -0.91
PHGDH-224ENST00000641711 ATP12AP54707 1039 aa9.36□□□□□ -0.91
PHGDH-224ENST00000641711 MLF1P58340 268 aa9.36□□□□□ -0.91
PHGDH-224ENST00000641711 LSM3P62310 102 aaKnown RBP9.36□□□□□ -0.91
PHGDH-224ENST00000641711 RNF4P78317 190 aa9.36□□□□□ -0.91
PHGDH-224ENST00000641711 MLLT11Q13015 90 aaPredicted RBP9.36□□□□□ -0.91
PHGDH-224ENST00000641711 FGFBP1Q14512 234 aa9.36□□□□□ -0.91
PHGDH-224ENST00000641711 ZNF846Q147U1 533 aa9.36□□□□□ -0.91
PHGDH-224ENST00000641711 EBPQ15125 230 aaKnown RBP9.36□□□□□ -0.91
PHGDH-224ENST00000641711 SPHARQ15513 63 aa9.36□□□□□ -0.91
PHGDH-224ENST00000641711 INAQ16352 499 aa9.36□□□□□ -0.91
PHGDH-224ENST00000641711 C11orf91Q3C1V1 193 aa9.36□□□□□ -0.91
PHGDH-224ENST00000641711 CT45A2Q5DJT8 189 aa9.36□□□□□ -0.91
PHGDH-224ENST00000641711 ACER2Q5QJU3 275 aa9.36□□□□□ -0.91
PHGDH-224ENST00000641711 AADACL4Q5VUY2 407 aa9.36□□□□□ -0.91
PHGDH-224ENST00000641711 WDR88Q6ZMY6 472 aa9.36□□□□□ -0.91
PHGDH-224ENST00000641711 ZNF550Q7Z398 422 aa9.36□□□□□ -0.91
PHGDH-224ENST00000641711 RPS19BP1Q86WX3 136 aaKnown RBP9.36□□□□□ -0.91
PHGDH-224ENST00000641711 ZADH2Q8N4Q0 377 aa9.36□□□□□ -0.91
PHGDH-224ENST00000641711 LSMEM1Q8N8F7 131 aa9.36□□□□□ -0.91
PHGDH-224ENST00000641711 ANKK1Q8NFD2 765 aa9.36□□□□□ -0.91
PHGDH-224ENST00000641711 OR2T33Q8NG76 320 aa9.36□□□□□ -0.91
PHGDH-224ENST00000641711 OR52I1Q8NGK6 324 aa9.36□□□□□ -0.91
PHGDH-224ENST00000641711 FNDC8Q8TC99 324 aa9.36□□□□□ -0.91
PHGDH-224ENST00000641711 SLC22A8Q8TCC7 542 aa9.36□□□□□ -0.91
PHGDH-224ENST00000641711 CNOT9Q92600 299 aaKnown RBP9.36□□□□□ -0.91
PHGDH-224ENST00000641711 HAS2Q92819 552 aa9.36□□□□□ -0.91
PHGDH-224ENST00000641711 RFKQ969G6 155 aa9.36□□□□□ -0.91
PHGDH-224ENST00000641711 ABHD17AQ96GS6 310 aa9.36□□□□□ -0.91
PHGDH-224ENST00000641711 PLEKHA8Q96JA3 519 aa9.36□□□□□ -0.91
PHGDH-224ENST00000641711 OPALINQ96PE5 141 aa9.36□□□□□ -0.91
PHGDH-224ENST00000641711 ZNF426Q9BUY5 554 aa9.36□□□□□ -0.91
PHGDH-224ENST00000641711 NXF2Q9GZY0 626 aaKnown RBP9.36□□□□□ -0.91
PHGDH-224ENST00000641711 OR10A5Q9H207 317 aa9.36□□□□□ -0.91
PHGDH-224ENST00000641711 Q9N2J8 555 aa9.36□□□□□ -0.91
PHGDH-224ENST00000641711 HMG20AQ9NP66 347 aa9.36□□□□□ -0.91
PHGDH-224ENST00000641711 ISYNA1Q9NPH2 558 aa9.36□□□□□ -0.91
PHGDH-224ENST00000641711 DNAJB12Q9NXW2 375 aaKnown RBP9.36□□□□□ -0.91
PHGDH-224ENST00000641711 TAS2R16Q9NYV7 291 aa9.36□□□□□ -0.91
PHGDH-224ENST00000641711 CCDC59Q9P031 241 aaKnown RBP9.36□□□□□ -0.91
PHGDH-224ENST00000641711 MED31Q9Y3C7 131 aa9.36□□□□□ -0.91
PHGDH-224ENST00000641711 PCDHGB6Q9Y5F9 930 aa9.36□□□□□ -0.91
PHGDH-224ENST00000641711 TMEM129A0AVI4 362 aa9.35□□□□□ -0.91
PHGDH-224ENST00000641711 METTL15A6NJ78 407 aa9.35□□□□□ -0.91
PHGDH-224ENST00000641711 HRKO00198 91 aa9.35□□□□□ -0.91
PHGDH-224ENST00000641711 CDC42EP2O14613 210 aa9.35□□□□□ -0.91
PHGDH-224ENST00000641711 RCBTB2O95199 551 aa9.35□□□□□ -0.91
PHGDH-224ENST00000641711 NTN1O95631 604 aa9.35□□□□□ -0.91
PHGDH-224ENST00000641711 FAM87AP0C7U9 286 aa9.35□□□□□ -0.91
PHGDH-224ENST00000641711 GKN3PP0CG01 181 aa9.35□□□□□ -0.91
PHGDH-224ENST00000641711 ZNF12P17014 697 aa9.35□□□□□ -0.91
PHGDH-224ENST00000641711 SSR4P51571 173 aa9.35□□□□□ -0.91
PHGDH-224ENST00000641711 C1DQ13901 141 aaKnown RBP9.35□□□□□ -0.91
PHGDH-224ENST00000641711 MED22Q15528 200 aa9.35□□□□□ -0.91
PHGDH-224ENST00000641711 SSX1Q16384 188 aa9.35□□□□□ -0.91
PHGDH-224ENST00000641711 TSTQ16762 297 aaKnown RBP9.35□□□□□ -0.91
PHGDH-224ENST00000641711 PDZK1Q5T2W1 519 aa9.35□□□□□ -0.91
PHGDH-224ENST00000641711 HLA-DQA1Q5Y7H0 255 aa9.35□□□□□ -0.91
PHGDH-224ENST00000641711 B3GNTL1Q67FW5 361 aaPredicted RBP9.35□□□□□ -0.91
PHGDH-224ENST00000641711 OPN5Q6U736 354 aa9.35□□□□□ -0.91
PHGDH-224ENST00000641711 LINC00114Q6XXX2 140 aa9.35□□□□□ -0.91
PHGDH-224ENST00000641711 BCDIN3DQ7Z5W3 292 aaKnown RBP9.35□□□□□ -0.91
PHGDH-224ENST00000641711 ADCK1Q86TW2 530 aa9.35□□□□□ -0.91
PHGDH-224ENST00000641711 MEX3DQ86XN8 651 aaKnown RBP9.35□□□□□ -0.91
PHGDH-224ENST00000641711 C9orf40Q8IXQ3 194 aa9.35□□□□□ -0.91
PHGDH-224ENST00000641711 SLC34A3Q8N130 599 aa9.35□□□□□ -0.91
PHGDH-224ENST00000641711 SIRT6Q8N6T7 355 aa9.35□□□□□ -0.91
PHGDH-224ENST00000641711 ZNF441Q8N8Z8 693 aa9.35□□□□□ -0.91
PHGDH-224ENST00000641711 C16orf52Q8NHV5 167 aa9.35□□□□□ -0.91
PHGDH-224ENST00000641711 HSPBAP1Q96EW2 488 aa9.35□□□□□ -0.91
PHGDH-224ENST00000641711 RNFT2Q96EX2 444 aa9.35□□□□□ -0.91
PHGDH-224ENST00000641711 JAM3Q9BX67 310 aa9.35□□□□□ -0.91
PHGDH-224ENST00000641711 WWTR1Q9GZV5 400 aa9.35□□□□□ -0.91
PHGDH-224ENST00000641711 OR51E2Q9H255 320 aa9.35□□□□□ -0.91
PHGDH-224ENST00000641711 MMP27Q9H306 513 aa9.35□□□□□ -0.91
PHGDH-224ENST00000641711 UBQLN3Q9H347 655 aa9.35□□□□□ -0.91
PHGDH-224ENST00000641711 FN3KQ9H479 309 aa9.35□□□□□ -0.91
PHGDH-224ENST00000641711 HHATLQ9HCP6 504 aa9.35□□□□□ -0.91
PHGDH-224ENST00000641711 MYOTQ9UBF9 498 aa9.35□□□□□ -0.91
PHGDH-224ENST00000641711 SEC14L4Q9UDX3 406 aa9.35□□□□□ -0.91
PHGDH-224ENST00000641711 CLEC2DQ9UHP7 191 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms