RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 OR1E3Q8WZA6 343 aa18.5■□□□□ 0.55
SYNGAP1-227ENST00000638142 CTHRC1Q96CG8 243 aa18.5■□□□□ 0.55
SYNGAP1-227ENST00000638142 CCDC120Q96HB5 630 aa18.5■□□□□ 0.55
SYNGAP1-227ENST00000638142 MS4A3Q96HJ5 214 aa18.5■□□□□ 0.55
SYNGAP1-227ENST00000638142 SMAD5Q99717 465 aaKnown RBP18.5■□□□□ 0.55
SYNGAP1-227ENST00000638142 ZFYVE21Q9BQ24 234 aa18.5■□□□□ 0.55
SYNGAP1-227ENST00000638142 DPCDQ9BVM2 203 aaPredicted RBP18.5■□□□□ 0.55
SYNGAP1-227ENST00000638142 AUNIPQ9H7T9 357 aa18.5■□□□□ 0.55
SYNGAP1-227ENST00000638142 MRPS2Q9Y399 296 aaKnown RBP18.5■□□□□ 0.55
SYNGAP1-227ENST00000638142 PRAF2O60831 178 aa18.49■□□□□ 0.55
SYNGAP1-227ENST00000638142 CT62P0C5K7 136 aa18.49■□□□□ 0.55
SYNGAP1-227ENST00000638142 EDNRAP25101 427 aa18.49■□□□□ 0.55
SYNGAP1-227ENST00000638142 EXOSC2Q13868 293 aaKnown RBP18.49■□□□□ 0.55
SYNGAP1-227ENST00000638142 FGFBP1Q14512 234 aa18.49■□□□□ 0.55
SYNGAP1-227ENST00000638142 POU4F3Q15319 338 aa18.49■□□□□ 0.55
SYNGAP1-227ENST00000638142 COMMD7Q86VX2 200 aa18.49■□□□□ 0.55
SYNGAP1-227ENST00000638142 TMEFF1Q8IYR6 380 aa18.49■□□□□ 0.55
SYNGAP1-227ENST00000638142 CMTM4Q8IZR5 234 aa18.49■□□□□ 0.55
SYNGAP1-227ENST00000638142 OR14A16Q8NHC5 309 aa18.49■□□□□ 0.55
SYNGAP1-227ENST00000638142 RSC1A1Q92681 617 aa18.49■□□□□ 0.55
SYNGAP1-227ENST00000638142 HOXB13Q92826 284 aaPredicted RBP18.49■□□□□ 0.55
SYNGAP1-227ENST00000638142 RERGQ96A58 199 aaPredicted RBP18.49■□□□□ 0.55
SYNGAP1-227ENST00000638142 ORAI3Q9BRQ5 295 aa18.49■□□□□ 0.55
SYNGAP1-227ENST00000638142 SPRTNQ9H040 489 aaPredicted RBP18.49■□□□□ 0.55
SYNGAP1-227ENST00000638142 DNAJB12Q9NXW2 375 aaKnown RBP18.49■□□□□ 0.55
SYNGAP1-227ENST00000638142 UBQLN2Q9UHD9 624 aa18.49■□□□□ 0.55
SYNGAP1-227ENST00000638142 GNG8Q9UK08 70 aa18.49■□□□□ 0.55
SYNGAP1-227ENST00000638142 C2orf16Q68DN1 1984 aa18.49■□□□□ 0.55
SYNGAP1-227ENST00000638142 TBC1D3DA0A087WVF3 549 aa18.49■□□□□ 0.55
SYNGAP1-227ENST00000638142 TBC1D3IA0A087WXS9 549 aa18.49■□□□□ 0.55
SYNGAP1-227ENST00000638142 TBC1D3LB9A6J9 549 aa18.49■□□□□ 0.55
SYNGAP1-227ENST00000638142 TMEM127O75204 238 aa18.49■□□□□ 0.55
SYNGAP1-227ENST00000638142 HOXC4P09017 264 aaPredicted RBP18.49■□□□□ 0.55
SYNGAP1-227ENST00000638142 TBC1D3HP0C7X1 549 aa18.49■□□□□ 0.55
SYNGAP1-227ENST00000638142 NAA10P41227 235 aaPredicted RBP18.49■□□□□ 0.55
SYNGAP1-227ENST00000638142 ZNF81P51508 661 aa18.49■□□□□ 0.55
SYNGAP1-227ENST00000638142 MFSD13AQ14CX5 517 aa18.49■□□□□ 0.55
SYNGAP1-227ENST00000638142 PON3Q15166 354 aa18.49■□□□□ 0.55
SYNGAP1-227ENST00000638142 TCEA2Q15560 299 aa18.49■□□□□ 0.55
SYNGAP1-227ENST00000638142 TBC1D3CQ6IPX1 549 aa18.49■□□□□ 0.55
SYNGAP1-227ENST00000638142 LINC00114Q6XXX2 140 aa18.49■□□□□ 0.55
SYNGAP1-227ENST00000638142 TBC1D3Q8IZP1 549 aaPredicted RBP18.49■□□□□ 0.55
SYNGAP1-227ENST00000638142 ENTPD2Q9Y5L3 495 aa18.49■□□□□ 0.55
SYNGAP1-227ENST00000638142 CHD7Q9P2D1 2997 aa18.49■□□□□ 0.55
SYNGAP1-227ENST00000638142 PDCD5O14737 125 aa18.48■□□□□ 0.55
SYNGAP1-227ENST00000638142 KHNYNO15037 678 aaKnown RBP18.48■□□□□ 0.55
SYNGAP1-227ENST00000638142 ECDO95905 644 aaPredicted RBP18.48■□□□□ 0.55
SYNGAP1-227ENST00000638142 TGM6O95932 706 aa18.48■□□□□ 0.55
SYNGAP1-227ENST00000638142 ZNF250P15622 560 aa18.48■□□□□ 0.55
SYNGAP1-227ENST00000638142 EPHA4P54764 986 aa18.48■□□□□ 0.55
SYNGAP1-227ENST00000638142 TAGLNQ01995 201 aaKnown RBP18.48■□□□□ 0.55
SYNGAP1-227ENST00000638142 ENPP7Q6UWV6 458 aa18.48■□□□□ 0.55
SYNGAP1-227ENST00000638142 PRSS41Q7RTY9 318 aa18.48■□□□□ 0.55
SYNGAP1-227ENST00000638142 ZNF436Q9C0F3 470 aaPredicted RBP18.48■□□□□ 0.55
SYNGAP1-227ENST00000638142 ACTR10Q9NZ32 417 aa18.48■□□□□ 0.55
SYNGAP1-227ENST00000638142 NAP1L6A6NFF2 107 aa18.48■□□□□ 0.55
SYNGAP1-227ENST00000638142 H0YGG7 62 aa18.48■□□□□ 0.55
SYNGAP1-227ENST00000638142 ADAM11O75078 769 aa18.48■□□□□ 0.55
SYNGAP1-227ENST00000638142 MPC2O95563 127 aa18.48■□□□□ 0.55
SYNGAP1-227ENST00000638142 GUSBP08236 651 aa18.48■□□□□ 0.55
SYNGAP1-227ENST00000638142 SRMP19623 302 aa18.48■□□□□ 0.55
SYNGAP1-227ENST00000638142 DIO1P49895 249 aa18.48■□□□□ 0.55
SYNGAP1-227ENST00000638142 EMDP50402 254 aa18.48■□□□□ 0.55
SYNGAP1-227ENST00000638142 CCR9P51686 369 aa18.48■□□□□ 0.55
SYNGAP1-227ENST00000638142 AP3S2P59780 193 aa18.48■□□□□ 0.55
SYNGAP1-227ENST00000638142 ZP1P60852 638 aa18.48■□□□□ 0.55
SYNGAP1-227ENST00000638142 ARF3P61204 181 aaPredicted RBP18.48■□□□□ 0.55
SYNGAP1-227ENST00000638142 LINGO2Q7L985 606 aa18.48■□□□□ 0.55
SYNGAP1-227ENST00000638142 YAF2Q8IY57 180 aa18.48■□□□□ 0.55
SYNGAP1-227ENST00000638142 IZUMO1Q8IYV9 350 aa18.48■□□□□ 0.55
SYNGAP1-227ENST00000638142 EID2Q8N6I1 236 aa18.48■□□□□ 0.55
SYNGAP1-227ENST00000638142 OR6C4Q8NGE1 309 aa18.48■□□□□ 0.55
SYNGAP1-227ENST00000638142 PDCD1LG2Q9BQ51 273 aa18.48■□□□□ 0.55
SYNGAP1-227ENST00000638142 NCDNQ9UBB6 729 aa18.48■□□□□ 0.55
SYNGAP1-227ENST00000638142 IER3IP1Q9Y5U9 82 aa18.48■□□□□ 0.55
SYNGAP1-227ENST00000638142 TRBV23OR9-2A0A075B6M9 112 aa18.47■□□□□ 0.55
SYNGAP1-227ENST00000638142 POM121BA6NF01 834 aa18.47■□□□□ 0.55
SYNGAP1-227ENST00000638142 SCO1O75880 301 aa18.47■□□□□ 0.55
SYNGAP1-227ENST00000638142 ACTR1BP42025 376 aa18.47■□□□□ 0.55
SYNGAP1-227ENST00000638142 ACTR1AP61163 376 aa18.47■□□□□ 0.55
SYNGAP1-227ENST00000638142 AANATQ16613 207 aa18.47■□□□□ 0.55
SYNGAP1-227ENST00000638142 MTFR2Q6P444 385 aa18.47■□□□□ 0.55
SYNGAP1-227ENST00000638142 ULK3Q6PHR2 472 aa18.47■□□□□ 0.55
SYNGAP1-227ENST00000638142 SEZ6L2Q6UXD5 910 aa18.47■□□□□ 0.55
SYNGAP1-227ENST00000638142 OR51L1Q8NGJ5 315 aa18.47■□□□□ 0.55
SYNGAP1-227ENST00000638142 DERL3Q96Q80 235 aa18.47■□□□□ 0.55
SYNGAP1-227ENST00000638142 SFXN1Q9H9B4 322 aa18.47■□□□□ 0.55
SYNGAP1-227ENST00000638142 NOX4Q9NPH5 578 aa18.47■□□□□ 0.55
SYNGAP1-227ENST00000638142 RPS6KB2Q9UBS0 482 aa18.47■□□□□ 0.55
SYNGAP1-227ENST00000638142 PRELID1Q9Y255 219 aa18.47■□□□□ 0.55
SYNGAP1-227ENST00000638142 SCN2AQ99250 2005 aa18.47■□□□□ 0.55
SYNGAP1-227ENST00000638142 GABARAPH6UMI1 98 aa18.47■□□□□ 0.55
SYNGAP1-227ENST00000638142 AIPO00170 330 aa18.47■□□□□ 0.55
SYNGAP1-227ENST00000638142 CBX7O95931 251 aa18.47■□□□□ 0.55
SYNGAP1-227ENST00000638142 HPXP02790 462 aa18.47■□□□□ 0.55
SYNGAP1-227ENST00000638142 ILF3Q12906 894 aaKnown RBP eCLIP18.47■□□□□ 0.55
SYNGAP1-227ENST00000638142 SLC35D3Q5M8T2 416 aa18.47■□□□□ 0.55
SYNGAP1-227ENST00000638142 ELFN2Q5R3F8 820 aa18.47■□□□□ 0.55
SYNGAP1-227ENST00000638142 TMEM240Q5SV17 173 aa18.47■□□□□ 0.55
SYNGAP1-227ENST00000638142 FAM199XQ6PEV8 388 aaPredicted RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms