RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 FAM234BA2RU67 622 aa15.81■□□□□ 0.12
PNKP-225ENST00000636214 CDHR4A6H8M9 788 aa15.81■□□□□ 0.12
PNKP-225ENST00000636214 HNRNPCL2B2RXH8 293 aa15.81■□□□□ 0.12
PNKP-225ENST00000636214 HNRNPCL3B7ZW38 293 aa15.81■□□□□ 0.12
PNKP-225ENST00000636214 ABCD4O14678 606 aa15.81■□□□□ 0.12
PNKP-225ENST00000636214 HNRNPCL1O60812 293 aaKnown RBP15.81■□□□□ 0.12
PNKP-225ENST00000636214 PGM3O95394 542 aa15.81■□□□□ 0.12
PNKP-225ENST00000636214 HNRNPCL4P0DMR1 293 aa15.81■□□□□ 0.12
PNKP-225ENST00000636214 PPP2R2BQ00005 443 aa15.81■□□□□ 0.12
PNKP-225ENST00000636214 TGFBR3Q03167 851 aa15.81■□□□□ 0.12
PNKP-225ENST00000636214 PLAURQ03405 335 aa15.81■□□□□ 0.12
PNKP-225ENST00000636214 BEND6Q5SZJ8 279 aaPredicted RBP15.81■□□□□ 0.12
PNKP-225ENST00000636214 OTUD3Q5T2D3 398 aaPredicted RBP15.81■□□□□ 0.12
PNKP-225ENST00000636214 WBP2NLQ6ICG8 309 aa15.81■□□□□ 0.12
PNKP-225ENST00000636214 PAQR6Q6TCH4 344 aa15.81■□□□□ 0.12
PNKP-225ENST00000636214 VRK2Q86Y07 508 aa15.81■□□□□ 0.12
PNKP-225ENST00000636214 PIAS4Q8N2W9 510 aaPredicted RBP15.81■□□□□ 0.12
PNKP-225ENST00000636214 CIARTQ8N365 385 aaPredicted RBP15.81■□□□□ 0.12
PNKP-225ENST00000636214 OR9I1Q8NGQ6 314 aa15.81■□□□□ 0.12
PNKP-225ENST00000636214 OR52N5Q8NH56 324 aa15.81■□□□□ 0.12
PNKP-225ENST00000636214 NEUROG1Q92886 237 aa15.81■□□□□ 0.12
PNKP-225ENST00000636214 VPS33AQ96AX1 596 aa15.81■□□□□ 0.12
PNKP-225ENST00000636214 TMEM19Q96HH6 336 aa15.81■□□□□ 0.12
PNKP-225ENST00000636214 HS6ST2Q96MM7 605 aa15.81■□□□□ 0.12
PNKP-225ENST00000636214 OR52B2Q96RD2 323 aa15.81■□□□□ 0.12
PNKP-225ENST00000636214 TRIM2Q9C040 744 aa15.81■□□□□ 0.12
PNKP-225ENST00000636214 RLIMQ9NVW2 624 aa15.81■□□□□ 0.12
PNKP-225ENST00000636214 CISD1Q9NZ45 108 aaKnown RBP15.81■□□□□ 0.12
PNKP-225ENST00000636214 MALT1Q9UDY8 824 aa15.81■□□□□ 0.12
PNKP-225ENST00000636214 KRT33AO76009 404 aa15.8■□□□□ 0.12
PNKP-225ENST00000636214 THBS1P07996 1170 aa15.8■□□□□ 0.12
PNKP-225ENST00000636214 SOD3P08294 240 aa15.8■□□□□ 0.12
PNKP-225ENST00000636214 GKN3PP0CG01 181 aa15.8■□□□□ 0.12
PNKP-225ENST00000636214 CDKN1AP38936 164 aa15.8■□□□□ 0.12
PNKP-225ENST00000636214 OR7A5Q15622 319 aa15.8■□□□□ 0.12
PNKP-225ENST00000636214 CLEC12BQ2HXU8 276 aa15.8■□□□□ 0.12
PNKP-225ENST00000636214 GTDC1Q4AE62 458 aa15.8■□□□□ 0.12
PNKP-225ENST00000636214 AGBL2Q5U5Z8 902 aa15.8■□□□□ 0.12
PNKP-225ENST00000636214 RNF220Q5VTB9 566 aa15.8■□□□□ 0.12
PNKP-225ENST00000636214 SLC22A25Q6T423 547 aa15.8■□□□□ 0.12
PNKP-225ENST00000636214 KLHL24Q6TFL4 600 aa15.8■□□□□ 0.12
PNKP-225ENST00000636214 ABHD12BQ7Z5M8 362 aaPredicted RBP15.8■□□□□ 0.12
PNKP-225ENST00000636214 ATG4DQ86TL0 474 aaPredicted RBP15.8■□□□□ 0.12
PNKP-225ENST00000636214 LILRB1Q8NHL6 650 aaPredicted RBP15.8■□□□□ 0.12
PNKP-225ENST00000636214 SLC38A5Q8WUX1 472 aa15.8■□□□□ 0.12
PNKP-225ENST00000636214 DYDC1Q8WWB3 177 aa15.8■□□□□ 0.12
PNKP-225ENST00000636214 AURKBQ96GD4 344 aaPredicted RBP15.8■□□□□ 0.12
PNKP-225ENST00000636214 TCF7L2Q9NQB0 619 aa15.8■□□□□ 0.12
PNKP-225ENST00000636214 SLC6A13Q9NSD5 602 aa15.8■□□□□ 0.12
PNKP-225ENST00000636214 MAGED1Q9Y5V3 778 aaPredicted RBP15.8■□□□□ 0.12
PNKP-225ENST00000636214 FLVCR1Q9Y5Y0 555 aa15.8■□□□□ 0.12
PNKP-225ENST00000636214 FN1P02751 2386 aaKnown RBP15.79■□□□□ 0.12
PNKP-225ENST00000636214 ZANQ9Y493 2812 aa15.79■□□□□ 0.12
PNKP-225ENST00000636214 DSPPQ9NZW4 1301 aa15.79■□□□□ 0.12
PNKP-225ENST00000636214 A0A096LPI6 279 aa15.79■□□□□ 0.12
PNKP-225ENST00000636214 ZC3H12DA2A288 527 aaKnown RBP15.79■□□□□ 0.12
PNKP-225ENST00000636214 A8MVM7 634 aa15.79■□□□□ 0.12
PNKP-225ENST00000636214 TFPTP0C1Z6 253 aa15.79■□□□□ 0.12
PNKP-225ENST00000636214 DANCRP0C864 163 aa15.79■□□□□ 0.12
PNKP-225ENST00000636214 IMPDH2P12268 514 aa15.79■□□□□ 0.12
PNKP-225ENST00000636214 PTAFRP25105 342 aa15.79■□□□□ 0.12
PNKP-225ENST00000636214 GTF2E2P29084 291 aaKnown RBP15.79■□□□□ 0.12
PNKP-225ENST00000636214 ZNF83P51522 516 aa15.79■□□□□ 0.12
PNKP-225ENST00000636214 H3F3AP84243 136 aa15.79■□□□□ 0.12
PNKP-225ENST00000636214 FADDQ13158 208 aa15.79■□□□□ 0.12
PNKP-225ENST00000636214 CEACAM7Q14002 265 aa15.79■□□□□ 0.12
PNKP-225ENST00000636214 ZNF311Q5JNZ3 666 aa15.79■□□□□ 0.12
PNKP-225ENST00000636214 RPS26P11Q5JNZ5 115 aaPredicted RBP15.79■□□□□ 0.12
PNKP-225ENST00000636214 AGAP6Q5VW22 663 aa15.79■□□□□ 0.12
PNKP-225ENST00000636214 MAVSQ7Z434 540 aa15.79■□□□□ 0.12
PNKP-225ENST00000636214 GPAT4Q86UL3 456 aa15.79■□□□□ 0.12
PNKP-225ENST00000636214 GOLGA6L1Q8N7Z2 621 aa15.79■□□□□ 0.12
PNKP-225ENST00000636214 OR52E4Q8NGH9 312 aa15.79■□□□□ 0.12
PNKP-225ENST00000636214 BBS10Q8TAM1 723 aa15.79■□□□□ 0.12
PNKP-225ENST00000636214 C7orf26Q96N11 449 aa15.79■□□□□ 0.12
PNKP-225ENST00000636214 SPATA9Q9BWV2 254 aa15.79■□□□□ 0.12
PNKP-225ENST00000636214 ADAM19Q9H013 955 aa15.79■□□□□ 0.12
PNKP-225ENST00000636214 BARX1Q9HBU1 254 aaPredicted RBP15.79■□□□□ 0.12
PNKP-225ENST00000636214 ADPRHL2Q9NX46 363 aa15.79■□□□□ 0.12
PNKP-225ENST00000636214 RPS6KB2Q9UBS0 482 aa15.79■□□□□ 0.12
PNKP-225ENST00000636214 DCTN4Q9UJW0 460 aa15.79■□□□□ 0.12
PNKP-225ENST00000636214 LIPT2A6NK58 231 aa15.78■□□□□ 0.12
PNKP-225ENST00000636214 SHISA9B4DS77 424 aa15.78■□□□□ 0.12
PNKP-225ENST00000636214 M0R1B8 84 aa15.78■□□□□ 0.12
PNKP-225ENST00000636214 RAMP1O60894 148 aa15.78■□□□□ 0.12
PNKP-225ENST00000636214 TGDSO95455 350 aa15.78■□□□□ 0.12
PNKP-225ENST00000636214 PCSK6P29122 969 aa15.78■□□□□ 0.12
PNKP-225ENST00000636214 MVDP53602 400 aa15.78■□□□□ 0.12
PNKP-225ENST00000636214 SLC17A1Q14916 467 aa15.78■□□□□ 0.12
PNKP-225ENST00000636214 RGNQ15493 299 aa15.78■□□□□ 0.12
PNKP-225ENST00000636214 C9orf135Q5VTT2 229 aa15.78■□□□□ 0.12
PNKP-225ENST00000636214 PRAMEF8Q5VWM4 474 aa15.78■□□□□ 0.12
PNKP-225ENST00000636214 PRAMEF7Q5VXH5 474 aa15.78■□□□□ 0.12
PNKP-225ENST00000636214 TMEM225Q6GV28 225 aa15.78■□□□□ 0.12
PNKP-225ENST00000636214 EPGNQ6UW88 154 aa15.78■□□□□ 0.12
PNKP-225ENST00000636214 SEZ6L2Q6UXD5 910 aa15.78■□□□□ 0.12
PNKP-225ENST00000636214 AAED1Q7RTV5 226 aa15.78■□□□□ 0.12
PNKP-225ENST00000636214 C17orf78Q8N4C9 275 aa15.78■□□□□ 0.12
PNKP-225ENST00000636214 C1orf162Q8NEQ5 155 aaPredicted RBP15.78■□□□□ 0.12
PNKP-225ENST00000636214 SF3B5Q9BWJ5 86 aaKnown RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms