RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 TMEM237Q96Q45 408 aa15.59■□□□□ 0.09
CLN6-212ENST00000636020 ZMAT3Q9HA38 289 aaKnown RBP15.59■□□□□ 0.09
CLN6-212ENST00000636020 SIRT3Q9NTG7 399 aaPredicted RBP15.59■□□□□ 0.09
CLN6-212ENST00000636020 ZCCHC3Q9NUD5 404 aaKnown RBP15.59■□□□□ 0.09
CLN6-212ENST00000636020 TMEM181Q9P2C4 612 aa15.59■□□□□ 0.09
CLN6-212ENST00000636020 OPN4Q9UHM6 478 aa15.59■□□□□ 0.09
CLN6-212ENST00000636020 IGHV2OR16-5A0A0B4J2B6 119 aa15.58■□□□□ 0.08
CLN6-212ENST00000636020 DNAJC9-AS1A6NH13 148 aa15.58■□□□□ 0.08
CLN6-212ENST00000636020 OR6C65A6NJZ3 312 aa15.58■□□□□ 0.08
CLN6-212ENST00000636020 ANKRD28O15084 1053 aa15.58■□□□□ 0.08
CLN6-212ENST00000636020 EIF1BO60739 113 aaKnown RBP15.58■□□□□ 0.08
CLN6-212ENST00000636020 TCN1P20061 433 aaPredicted RBP15.58■□□□□ 0.08
CLN6-212ENST00000636020 FKBP2P26885 142 aaKnown RBP15.58■□□□□ 0.08
CLN6-212ENST00000636020 EVX1P49640 407 aa15.58■□□□□ 0.08
CLN6-212ENST00000636020 FOXA1P55317 472 aa15.58■□□□□ 0.08
CLN6-212ENST00000636020 DCAF12L2Q5VW00 463 aa15.58■□□□□ 0.08
CLN6-212ENST00000636020 AAED1Q7RTV5 226 aa15.58■□□□□ 0.08
CLN6-212ENST00000636020 TRIM46Q7Z4K8 759 aa15.58■□□□□ 0.08
CLN6-212ENST00000636020 AURKBQ96GD4 344 aaPredicted RBP15.58■□□□□ 0.08
CLN6-212ENST00000636020 ACTRT3Q9BYD9 372 aa15.58■□□□□ 0.08
CLN6-212ENST00000636020 MS4A5Q9H3V2 200 aa15.58■□□□□ 0.08
CLN6-212ENST00000636020 REEP4Q9H6H4 257 aa15.58■□□□□ 0.08
CLN6-212ENST00000636020 ZNF665Q9H7R5 613 aa15.58■□□□□ 0.08
CLN6-212ENST00000636020 MOV10Q9HCE1 1003 aaKnown RBP15.58■□□□□ 0.08
CLN6-212ENST00000636020 SH3BP4Q9P0V3 963 aa15.58■□□□□ 0.08
CLN6-212ENST00000636020 STK38LQ9Y2H1 464 aa15.58■□□□□ 0.08
CLN6-212ENST00000636020 CMAHPQ9Y471 501 aa15.58■□□□□ 0.08
CLN6-212ENST00000636020 M0R233 179 aa15.57■□□□□ 0.08
CLN6-212ENST00000636020 PIP5K1BO14986 540 aa15.57■□□□□ 0.08
CLN6-212ENST00000636020 SKAP2O75563 359 aaPredicted RBP15.57■□□□□ 0.08
CLN6-212ENST00000636020 RP2O75695 350 aa15.57■□□□□ 0.08
CLN6-212ENST00000636020 EFNA1P20827 205 aaPredicted RBP15.57■□□□□ 0.08
CLN6-212ENST00000636020 PLTPP55058 493 aa15.57■□□□□ 0.08
CLN6-212ENST00000636020 MRPS11P82912 194 aaKnown RBP15.57■□□□□ 0.08
CLN6-212ENST00000636020 LCP2Q13094 533 aa15.57■□□□□ 0.08
CLN6-212ENST00000636020 KIAA0040Q15053 153 aa15.57■□□□□ 0.08
CLN6-212ENST00000636020 MSMPQ1L6U9 139 aa15.57■□□□□ 0.08
CLN6-212ENST00000636020 TEX35Q5T0J7 233 aa15.57■□□□□ 0.08
CLN6-212ENST00000636020 ADGRG3Q86Y34 549 aa15.57■□□□□ 0.08
CLN6-212ENST00000636020 ADAMTS15Q8TE58 950 aa15.57■□□□□ 0.08
CLN6-212ENST00000636020 TAF15Q92804 592 aaKnown RBP eCLIP15.57■□□□□ 0.08
CLN6-212ENST00000636020 ZNF385AQ96PM9 386 aaKnown RBP15.57■□□□□ 0.08
CLN6-212ENST00000636020 NAA11Q9BSU3 229 aaPredicted RBP15.57■□□□□ 0.08
CLN6-212ENST00000636020 NELFAQ9H3P2 528 aa15.57■□□□□ 0.08
CLN6-212ENST00000636020 PDP1Q9P0J1 537 aaPredicted RBP15.57■□□□□ 0.08
CLN6-212ENST00000636020 ZDHHC2Q9UIJ5 367 aa15.57■□□□□ 0.08
CLN6-212ENST00000636020 KCNE5Q9UJ90 142 aa15.57■□□□□ 0.08
CLN6-212ENST00000636020 AKAP10O43572 662 aa15.56■□□□□ 0.08
CLN6-212ENST00000636020 DEAF1O75398 565 aaPredicted RBP15.56■□□□□ 0.08
CLN6-212ENST00000636020 RSL1D1O76021 490 aaKnown RBP15.56■□□□□ 0.08
CLN6-212ENST00000636020 CSTAP01040 98 aa15.56■□□□□ 0.08
CLN6-212ENST00000636020 IMPDH2P12268 514 aa15.56■□□□□ 0.08
CLN6-212ENST00000636020 HOXB1P14653 301 aaPredicted RBP15.56■□□□□ 0.08
CLN6-212ENST00000636020 CBR1P16152 277 aa15.56■□□□□ 0.08
CLN6-212ENST00000636020 IMPDH1P20839 514 aa15.56■□□□□ 0.08
CLN6-212ENST00000636020 MDKP21741 143 aaPredicted RBP15.56■□□□□ 0.08
CLN6-212ENST00000636020 SLC35A1P78382 337 aa15.56■□□□□ 0.08
CLN6-212ENST00000636020 SNTB2Q13425 540 aaKnown RBP15.56■□□□□ 0.08
CLN6-212ENST00000636020 PDE7AQ13946 482 aa15.56■□□□□ 0.08
CLN6-212ENST00000636020 DAG1Q14118 895 aa15.56■□□□□ 0.08
CLN6-212ENST00000636020 REP15Q6BDI9 236 aa15.56■□□□□ 0.08
CLN6-212ENST00000636020 C16orf45Q96MC5 204 aaPredicted RBP15.56■□□□□ 0.08
CLN6-212ENST00000636020 SDF2Q99470 211 aa15.56■□□□□ 0.08
CLN6-212ENST00000636020 ZNF416Q9BWM5 594 aa15.56■□□□□ 0.08
CLN6-212ENST00000636020 MRPL37Q9BZE1 423 aaKnown RBP15.56■□□□□ 0.08
CLN6-212ENST00000636020 NMUR2Q9GZQ4 415 aa15.56■□□□□ 0.08
CLN6-212ENST00000636020 MMP27Q9H306 513 aa15.56■□□□□ 0.08
CLN6-212ENST00000636020 C7orf69Q9H7B7 122 aa15.56■□□□□ 0.08
CLN6-212ENST00000636020 RRAGDQ9NQL2 400 aaPredicted RBP15.56■□□□□ 0.08
CLN6-212ENST00000636020 ARHGAP32A7KAX9 2087 aa15.55■□□□□ 0.08
CLN6-212ENST00000636020 A0A096LPE4 126 aa15.55■□□□□ 0.08
CLN6-212ENST00000636020 CENPVL1A0A0U1RR11 272 aa15.55■□□□□ 0.08
CLN6-212ENST00000636020 A0A1W2PPZ6 126 aa15.55■□□□□ 0.08
CLN6-212ENST00000636020 FAM187AA6NFU0 413 aa15.55■□□□□ 0.08
CLN6-212ENST00000636020 ZNF587BE7ETH6 402 aa15.55■□□□□ 0.08
CLN6-212ENST00000636020 KRT33AO76009 404 aa15.55■□□□□ 0.08
CLN6-212ENST00000636020 GSNP06396 782 aa15.55■□□□□ 0.08
CLN6-212ENST00000636020 RNASE1P07998 156 aaKnown RBP15.55■□□□□ 0.08
CLN6-212ENST00000636020 UBTFL6P0CB48 400 aaPredicted RBP15.55■□□□□ 0.08
CLN6-212ENST00000636020 SEC24CP53992 1094 aa15.55■□□□□ 0.08
CLN6-212ENST00000636020 ZNF141Q15928 474 aa15.55■□□□□ 0.08
CLN6-212ENST00000636020 PAQR6Q6TCH4 344 aa15.55■□□□□ 0.08
CLN6-212ENST00000636020 LINGO2Q7L985 606 aa15.55■□□□□ 0.08
CLN6-212ENST00000636020 GRINAQ7Z429 371 aa15.55■□□□□ 0.08
CLN6-212ENST00000636020 OR9K2Q8NGE7 335 aa15.55■□□□□ 0.08
CLN6-212ENST00000636020 FBXO25Q8TCJ0 367 aa15.55■□□□□ 0.08
CLN6-212ENST00000636020 GPATCH2Q9NW75 528 aa15.55■□□□□ 0.08
CLN6-212ENST00000636020 CCL27Q9Y4X3 112 aa15.55■□□□□ 0.08
CLN6-212ENST00000636020 NUP214P35658 2090 aaPredicted RBP15.55■□□□□ 0.08
CLN6-212ENST00000636020 NCR1O76036 304 aa15.54■□□□□ 0.08
CLN6-212ENST00000636020 CCNA2P20248 432 aa15.54■□□□□ 0.08
CLN6-212ENST00000636020 TAC1P20366 129 aa15.54■□□□□ 0.08
CLN6-212ENST00000636020 GATA3P23771 443 aa15.54■□□□□ 0.08
CLN6-212ENST00000636020 SRSF4Q08170 494 aaKnown RBP15.54■□□□□ 0.08
CLN6-212ENST00000636020 ATP6AP1LQ52LC2 224 aa15.54■□□□□ 0.08
CLN6-212ENST00000636020 KRT80Q6KB66 452 aa15.54■□□□□ 0.08
CLN6-212ENST00000636020 LEG1Q6P5S2 330 aa15.54■□□□□ 0.08
CLN6-212ENST00000636020 LSRQ86X29 649 aaPredicted RBP15.54■□□□□ 0.08
CLN6-212ENST00000636020 IL17RDQ8NFM7 739 aa15.54■□□□□ 0.08
CLN6-212ENST00000636020 ZNF563Q8TA94 476 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms