RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 RFXAPO00287 272 aa10.96□□□□□ -0.66
SHPRH-211ENST00000629427 OR7C1O76099 320 aaPredicted RBP10.96□□□□□ -0.66
SHPRH-211ENST00000629427 GSTP1P09211 210 aaKnown RBP10.96□□□□□ -0.66
SHPRH-211ENST00000629427 AAED1Q7RTV5 226 aa10.96□□□□□ -0.66
SHPRH-211ENST00000629427 BIRC8Q96P09 236 aa10.96□□□□□ -0.66
SHPRH-211ENST00000629427 SDR39U1Q9NRG7 319 aaPredicted RBP10.96□□□□□ -0.66
SHPRH-211ENST00000629427 AIFM1O95831 613 aa10.96□□□□□ -0.66
SHPRH-211ENST00000629427 DEFA4P12838 97 aa10.96□□□□□ -0.66
SHPRH-211ENST00000629427 NKX6-1P78426 367 aaPredicted RBP10.96□□□□□ -0.66
SHPRH-211ENST00000629427 LTBQ06643 244 aa10.96□□□□□ -0.66
SHPRH-211ENST00000629427 GAB1Q13480 694 aa10.96□□□□□ -0.66
SHPRH-211ENST00000629427 GPR176Q14439 515 aa10.96□□□□□ -0.66
SHPRH-211ENST00000629427 HES1Q14469 280 aa10.96□□□□□ -0.66
SHPRH-211ENST00000629427 MLF2Q15773 248 aaPredicted RBP10.96□□□□□ -0.66
SHPRH-211ENST00000629427 UBE2NLQ5JXB2 153 aa10.96□□□□□ -0.66
SHPRH-211ENST00000629427 ACOT11Q8WXI4 607 aaPredicted RBP10.96□□□□□ -0.66
SHPRH-211ENST00000629427 SLC6A18Q96N87 628 aa10.96□□□□□ -0.66
SHPRH-211ENST00000629427 SLC25A31Q9H0C2 315 aa10.96□□□□□ -0.66
SHPRH-211ENST00000629427 TMEM181Q9P2C4 612 aa10.96□□□□□ -0.66
SHPRH-211ENST00000629427 ZNF593O00488 134 aaPredicted RBP10.95□□□□□ -0.66
SHPRH-211ENST00000629427 NKX2-5P52952 324 aaPredicted RBP10.95□□□□□ -0.66
SHPRH-211ENST00000629427 GSCP56915 257 aaPredicted RBP10.95□□□□□ -0.66
SHPRH-211ENST00000629427 HBA1P69905 142 aa10.95□□□□□ -0.66
SHPRH-211ENST00000629427 CXADRP78310 365 aa10.95□□□□□ -0.66
SHPRH-211ENST00000629427 PRICKLE2Q7Z3G6 844 aa10.95□□□□□ -0.66
SHPRH-211ENST00000629427 OR4M1Q8NGD0 313 aa10.95□□□□□ -0.66
SHPRH-211ENST00000629427 DEDD2Q8WXF8 326 aa10.95□□□□□ -0.66
SHPRH-211ENST00000629427 RBMXL1Q96E39 390 aaKnown RBP10.95□□□□□ -0.66
SHPRH-211ENST00000629427 MMP28Q9H239 520 aa10.95□□□□□ -0.66
SHPRH-211ENST00000629427 VAPAQ9P0L0 249 aa10.95□□□□□ -0.66
SHPRH-211ENST00000629427 MCRIP1C9JLW8 97 aa10.95□□□□□ -0.66
SHPRH-211ENST00000629427 SEC14L2O76054 403 aa10.95□□□□□ -0.66
SHPRH-211ENST00000629427 TNFRSF17Q02223 184 aa10.95□□□□□ -0.66
SHPRH-211ENST00000629427 PRDX1Q06830 199 aaKnown RBP10.95□□□□□ -0.66
SHPRH-211ENST00000629427 C17orf67Q0P5P2 114 aa10.95□□□□□ -0.66
SHPRH-211ENST00000629427 AADACL3Q5VUY0 350 aa10.95□□□□□ -0.66
SHPRH-211ENST00000629427 ZADH2Q8N4Q0 377 aa10.95□□□□□ -0.66
SHPRH-211ENST00000629427 MFSD9Q8NBP5 474 aa10.95□□□□□ -0.66
SHPRH-211ENST00000629427 ZNF286AQ9HBT8 521 aa10.95□□□□□ -0.66
SHPRH-211ENST00000629427 RNF212BA8MTL3 300 aa10.95□□□□□ -0.66
SHPRH-211ENST00000629427 TMEM189-UBE2V1I3L0A0 370 aa10.95□□□□□ -0.66
SHPRH-211ENST00000629427 LGALS4P56470 323 aa10.95□□□□□ -0.66
SHPRH-211ENST00000629427 OR1D5P58170 312 aa10.95□□□□□ -0.66
SHPRH-211ENST00000629427 MSMO1Q15800 293 aa10.95□□□□□ -0.66
SHPRH-211ENST00000629427 RBMXL3Q8N7X1 1067 aaKnown RBP10.95□□□□□ -0.66
SHPRH-211ENST00000629427 LMNTD1Q8N9Z9 388 aa10.95□□□□□ -0.66
SHPRH-211ENST00000629427 OR4F15Q8NGB8 312 aa10.95□□□□□ -0.66
SHPRH-211ENST00000629427 PAQR8Q8TEZ7 354 aa10.95□□□□□ -0.66
SHPRH-211ENST00000629427 SHISA4Q96DD7 197 aa10.95□□□□□ -0.66
SHPRH-211ENST00000629427 INSM2Q96T92 566 aaPredicted RBP10.95□□□□□ -0.66
SHPRH-211ENST00000629427 SLC19A3Q9BZV2 496 aa10.95□□□□□ -0.66
SHPRH-211ENST00000629427 MED20Q9H944 212 aa10.95□□□□□ -0.66
SHPRH-211ENST00000629427 A0A1B0GUL6 1792 aa10.95□□□□□ -0.66
SHPRH-211ENST00000629427 CLDN6P56747 220 aa10.95□□□□□ -0.66
SHPRH-211ENST00000629427 RIPPLY1Q0D2K3 151 aa10.95□□□□□ -0.66
SHPRH-211ENST00000629427 COQ10AQ96MF6 247 aa10.95□□□□□ -0.66
SHPRH-211ENST00000629427 SEMA6CQ9H3T2 930 aa10.95□□□□□ -0.66
SHPRH-211ENST00000629427 ADAM12O43184 909 aa10.95□□□□□ -0.66
SHPRH-211ENST00000629427 MT-ND4P03905 459 aa10.95□□□□□ -0.66
SHPRH-211ENST00000629427 RAB38P57729 211 aa10.95□□□□□ -0.66
SHPRH-211ENST00000629427 C12orf45Q8N5I9 185 aaPredicted RBP10.95□□□□□ -0.66
SHPRH-211ENST00000629427 UCN3Q969E3 161 aa10.95□□□□□ -0.66
SHPRH-211ENST00000629427 OCSTAMPQ9BR26 566 aa10.95□□□□□ -0.66
SHPRH-211ENST00000629427 ZNF696Q9H7X3 374 aa10.95□□□□□ -0.66
SHPRH-211ENST00000629427 A0A1W2PQ09 198 aa10.95□□□□□ -0.66
SHPRH-211ENST00000629427 ZNF705FA8MVS1 300 aaPredicted RBP10.95□□□□□ -0.66
SHPRH-211ENST00000629427 WASH4PA8MWX3 477 aa10.95□□□□□ -0.66
SHPRH-211ENST00000629427 PRAMEF4O60810 478 aa10.95□□□□□ -0.66
SHPRH-211ENST00000629427 ZNF705DP0CH99 300 aaPredicted RBP10.95□□□□□ -0.66
SHPRH-211ENST00000629427 ZNF705BP0CI00 300 aaPredicted RBP10.95□□□□□ -0.66
SHPRH-211ENST00000629427 ENPP1P22413 925 aa10.95□□□□□ -0.66
SHPRH-211ENST00000629427 FGFBP1Q14512 234 aa10.95□□□□□ -0.66
SHPRH-211ENST00000629427 BATFQ16520 125 aa10.95□□□□□ -0.66
SHPRH-211ENST00000629427 TRIM61Q5EBN2 209 aa10.95□□□□□ -0.66
SHPRH-211ENST00000629427 KHDC1LQ5JSQ8 128 aa10.95□□□□□ -0.66
SHPRH-211ENST00000629427 FAM69AQ5T7M9 428 aa10.95□□□□□ -0.66
SHPRH-211ENST00000629427 ZNF687Q8N1G0 1237 aa10.95□□□□□ -0.66
SHPRH-211ENST00000629427 ELMOD3Q96FG2 381 aa10.95□□□□□ -0.66
SHPRH-211ENST00000629427 LHX6Q9UPM6 363 aa10.95□□□□□ -0.66
SHPRH-211ENST00000629427 FBXO7Q9Y3I1 522 aa10.95□□□□□ -0.66
SHPRH-211ENST00000629427 SLC22A7Q9Y694 548 aa10.95□□□□□ -0.66
SHPRH-211ENST00000629427 FUOMA2VDF0 154 aa10.94□□□□□ -0.66
SHPRH-211ENST00000629427 ZNF587BE7ETH6 402 aa10.94□□□□□ -0.66
SHPRH-211ENST00000629427 GAREM2Q75VX8 874 aa10.94□□□□□ -0.66
SHPRH-211ENST00000629427 TMPRSS7Q7RTY8 843 aa10.94□□□□□ -0.66
SHPRH-211ENST00000629427 SCCPDHQ8NBX0 429 aa10.94□□□□□ -0.66
SHPRH-211ENST00000629427 SIMC1Q8NDZ2 872 aa10.94□□□□□ -0.66
SHPRH-211ENST00000629427 OR7G2Q8NG99 324 aa10.94□□□□□ -0.66
SHPRH-211ENST00000629427 OR13C2Q8NGS9 318 aa10.94□□□□□ -0.66
SHPRH-211ENST00000629427 ASB11Q8WXH4 323 aa10.94□□□□□ -0.66
SHPRH-211ENST00000629427 NKX3-1Q99801 234 aaPredicted RBP10.94□□□□□ -0.66
SHPRH-211ENST00000629427 METTL9Q9H1A3 318 aa10.94□□□□□ -0.66
SHPRH-211ENST00000629427 KCNJ16Q9NPI9 418 aa10.94□□□□□ -0.66
SHPRH-211ENST00000629427 ATG4BQ9Y4P1 393 aa10.94□□□□□ -0.66
SHPRH-211ENST00000629427 MBLAC1A4D2B0 266 aaPredicted RBP10.94□□□□□ -0.66
SHPRH-211ENST00000629427 ARPC1BO15143 372 aaKnown RBP10.94□□□□□ -0.66
SHPRH-211ENST00000629427 TPT1P13693 172 aaKnown RBP10.94□□□□□ -0.66
SHPRH-211ENST00000629427 CHATP28329 748 aa10.94□□□□□ -0.66
SHPRH-211ENST00000629427 CA5AP35218 305 aa10.94□□□□□ -0.66
SHPRH-211ENST00000629427 MMP12P39900 470 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms