RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 ACOXLQ9NUZ1 547 aa6.9□□□□□ -1.31
PKP4-217ENST00000628904 MTCL1Q9Y4B5 1905 aaKnown RBP6.9□□□□□ -1.31
PKP4-217ENST00000628904 FANCMQ8IYD8 2048 aa6.89□□□□□ -1.31
PKP4-217ENST00000628904 SMLR1H3BR10 107 aa6.89□□□□□ -1.31
PKP4-217ENST00000628904 PIAS2O75928 621 aa6.89□□□□□ -1.31
PKP4-217ENST00000628904 MT-ND5P03915 603 aa6.89□□□□□ -1.31
PKP4-217ENST00000628904 GP1BBP13224 206 aa6.89□□□□□ -1.31
PKP4-217ENST00000628904 SPINK2P20155 84 aa6.89□□□□□ -1.31
PKP4-217ENST00000628904 STAT5AP42229 794 aa6.89□□□□□ -1.31
PKP4-217ENST00000628904 ELOAQ14241 798 aaKnown RBP6.89□□□□□ -1.31
PKP4-217ENST00000628904 TAF13Q15543 124 aa6.89□□□□□ -1.31
PKP4-217ENST00000628904 IRAK1BP1Q5VVH5 260 aa6.89□□□□□ -1.31
PKP4-217ENST00000628904 MEDAGQ5VYS4 303 aa6.89□□□□□ -1.31
PKP4-217ENST00000628904 SFRP4Q6FHJ7 346 aaPredicted RBP6.89□□□□□ -1.31
PKP4-217ENST00000628904 LRRN1Q6UXK5 716 aa6.89□□□□□ -1.31
PKP4-217ENST00000628904 RNF165Q6ZSG1 346 aa6.89□□□□□ -1.31
PKP4-217ENST00000628904 CCDC80Q76M96 950 aa6.89□□□□□ -1.31
PKP4-217ENST00000628904 CADM3Q8N126 398 aa6.89□□□□□ -1.31
PKP4-217ENST00000628904 C17orf47Q8NEP4 570 aa6.89□□□□□ -1.31
PKP4-217ENST00000628904 KTI12Q96EK9 354 aaPredicted RBP6.89□□□□□ -1.31
PKP4-217ENST00000628904 ING3Q9NXR8 418 aa6.89□□□□□ -1.31
PKP4-217ENST00000628904 NUFIP1Q9UHK0 495 aaKnown RBP6.89□□□□□ -1.31
PKP4-217ENST00000628904 CXorf51AA0A1B0GTR3 108 aa6.89□□□□□ -1.31
PKP4-217ENST00000628904 A0A1W2PNR3 127 aa6.89□□□□□ -1.31
PKP4-217ENST00000628904 TLCD2A6NGC4 264 aa6.89□□□□□ -1.31
PKP4-217ENST00000628904 METTL15A6NJ78 407 aa6.89□□□□□ -1.31
PKP4-217ENST00000628904 SRPX2O60687 465 aaPredicted RBP6.89□□□□□ -1.31
PKP4-217ENST00000628904 SLITRK5O94991 958 aa6.89□□□□□ -1.31
PKP4-217ENST00000628904 NDUFB2O95178 105 aa6.89□□□□□ -1.31
PKP4-217ENST00000628904 SEMG1P04279 462 aa6.89□□□□□ -1.31
PKP4-217ENST00000628904 EMP2P54851 167 aa6.89□□□□□ -1.31
PKP4-217ENST00000628904 TUBA1BP68363 451 aa6.89□□□□□ -1.31
PKP4-217ENST00000628904 RELAQ04206 551 aa6.89□□□□□ -1.31
PKP4-217ENST00000628904 SCN1BQ07699 218 aa6.89□□□□□ -1.31
PKP4-217ENST00000628904 LGALS3BPQ08380 585 aa6.89□□□□□ -1.31
PKP4-217ENST00000628904 SMAD4Q13485 552 aaKnown RBP6.89□□□□□ -1.31
PKP4-217ENST00000628904 ACSM3Q53FZ2 586 aa6.89□□□□□ -1.31
PKP4-217ENST00000628904 ULK3Q6PHR2 472 aa6.89□□□□□ -1.31
PKP4-217ENST00000628904 NPSR1Q6W5P4 371 aa6.89□□□□□ -1.31
PKP4-217ENST00000628904 RASSF6Q6ZTQ3 369 aa6.89□□□□□ -1.31
PKP4-217ENST00000628904 TUBA1AQ71U36 451 aa6.89□□□□□ -1.31
PKP4-217ENST00000628904 TIGD4Q8IY51 512 aa6.89□□□□□ -1.31
PKP4-217ENST00000628904 PM20D2Q8IYS1 436 aa6.89□□□□□ -1.31
PKP4-217ENST00000628904 NANOGP1Q8N7R0 232 aa6.89□□□□□ -1.31
PKP4-217ENST00000628904 ZBTB8BQ8NAP8 495 aaPredicted RBP6.89□□□□□ -1.31
PKP4-217ENST00000628904 DAZLQ92904 295 aaKnown RBP6.89□□□□□ -1.31
PKP4-217ENST00000628904 PPP1R14AQ96A00 147 aa6.89□□□□□ -1.31
PKP4-217ENST00000628904 NUDT9Q9BW91 350 aa6.89□□□□□ -1.31
PKP4-217ENST00000628904 PITHD1Q9GZP4 211 aaPredicted RBP6.89□□□□□ -1.31
PKP4-217ENST00000628904 TP63Q9H3D4 680 aaPredicted RBP6.89□□□□□ -1.31
PKP4-217ENST00000628904 MED29Q9NX70 200 aa6.89□□□□□ -1.31
PKP4-217ENST00000628904 GPN3Q9UHW5 284 aaPredicted RBP6.89□□□□□ -1.31
PKP4-217ENST00000628904 RARRES3Q9UL19 164 aa6.89□□□□□ -1.31
PKP4-217ENST00000628904 COL6A6A6NMZ7 2263 aa6.89□□□□□ -1.31
PKP4-217ENST00000628904 A0A087WV48 116 aa6.89□□□□□ -1.31
PKP4-217ENST00000628904 SERTM1A2A2V5 107 aa6.89□□□□□ -1.31
PKP4-217ENST00000628904 DCDC2BA2VCK2 349 aa6.89□□□□□ -1.31
PKP4-217ENST00000628904 SIGLEC6O43699 453 aa6.89□□□□□ -1.31
PKP4-217ENST00000628904 BRINP1O60477 761 aa6.89□□□□□ -1.31
PKP4-217ENST00000628904 SCG5P05408 212 aa6.89□□□□□ -1.31
PKP4-217ENST00000628904 LIMS3P0CW19 117 aa6.89□□□□□ -1.31
PKP4-217ENST00000628904 LIMS4P0CW20 117 aa6.89□□□□□ -1.31
PKP4-217ENST00000628904 NME1P15531 152 aaKnown RBP6.89□□□□□ -1.31
PKP4-217ENST00000628904 GBX2P52951 348 aaPredicted RBP6.89□□□□□ -1.31
PKP4-217ENST00000628904 NRG3P56975 720 aa6.89□□□□□ -1.31
PKP4-217ENST00000628904 QPRTQ15274 297 aa6.89□□□□□ -1.31
PKP4-217ENST00000628904 ETFDHQ16134 617 aa6.89□□□□□ -1.31
PKP4-217ENST00000628904 C6orf183Q5T699 404 aa6.89□□□□□ -1.31
PKP4-217ENST00000628904 C9orf135Q5VTT2 229 aa6.89□□□□□ -1.31
PKP4-217ENST00000628904 UBE2UQ5VVX9 321 aa6.89□□□□□ -1.31
PKP4-217ENST00000628904 VASNQ6EMK4 673 aa6.89□□□□□ -1.31
PKP4-217ENST00000628904 ZNF770Q6IQ21 691 aaPredicted RBP6.89□□□□□ -1.31
PKP4-217ENST00000628904 MEPCEQ7L2J0 689 aaKnown RBP6.89□□□□□ -1.31
PKP4-217ENST00000628904 SSX6Q7RTT6 188 aa6.89□□□□□ -1.31
PKP4-217ENST00000628904 ZNF550Q7Z398 422 aa6.89□□□□□ -1.31
PKP4-217ENST00000628904 SLC25A45Q8N413 288 aa6.89□□□□□ -1.31
PKP4-217ENST00000628904 OR6C4Q8NGE1 309 aa6.89□□□□□ -1.31
PKP4-217ENST00000628904 RHBDD1Q8TEB9 315 aa6.89□□□□□ -1.31
PKP4-217ENST00000628904 PCNPQ8WW12 178 aaKnown RBP6.89□□□□□ -1.31
PKP4-217ENST00000628904 HSD17B8Q92506 261 aa6.89□□□□□ -1.31
PKP4-217ENST00000628904 OR1F2PQ96R84 312 aa6.89□□□□□ -1.31
PKP4-217ENST00000628904 DEFB126Q9BYW3 111 aa6.89□□□□□ -1.31
PKP4-217ENST00000628904 PTRH2Q9Y3E5 179 aaKnown RBP6.89□□□□□ -1.31
PKP4-217ENST00000628904 ASPMQ8IZT6 3477 aa6.88□□□□□ -1.31
PKP4-217ENST00000628904 SURF4O15260 269 aa6.88□□□□□ -1.31
PKP4-217ENST00000628904 ZNF264O43296 627 aa6.88□□□□□ -1.31
PKP4-217ENST00000628904 FMO6PO60774 539 aa6.88□□□□□ -1.31
PKP4-217ENST00000628904 UPK1BO75841 260 aa6.88□□□□□ -1.31
PKP4-217ENST00000628904 RLN1P04808 185 aa6.88□□□□□ -1.31
PKP4-217ENST00000628904 GLULP15104 373 aa6.88□□□□□ -1.31
PKP4-217ENST00000628904 RPS18P62269 152 aaKnown RBP6.88□□□□□ -1.31
PKP4-217ENST00000628904 UBE2IP63279 158 aaKnown RBP6.88□□□□□ -1.31
PKP4-217ENST00000628904 SRYQ05066 204 aa6.88□□□□□ -1.31
PKP4-217ENST00000628904 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.88□□□□□ -1.31
PKP4-217ENST00000628904 TCTE1Q5JU00 501 aa6.88□□□□□ -1.31
PKP4-217ENST00000628904 TMEM225Q6GV28 225 aa6.88□□□□□ -1.31
PKP4-217ENST00000628904 FAAP20Q6NZ36 180 aa6.88□□□□□ -1.31
PKP4-217ENST00000628904 PAPD4Q6PIY7 484 aaKnown RBP6.88□□□□□ -1.31
PKP4-217ENST00000628904 APOOLQ6UXV4 268 aa6.88□□□□□ -1.31
PKP4-217ENST00000628904 TMPRSS12Q86WS5 348 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms