RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 DRD5P21918 477 aa11.4□□□□□ -0.59
SYNGAP1-207ENST00000628646 DPP4P27487 766 aa11.4□□□□□ -0.59
SYNGAP1-207ENST00000628646 SOWAHCQ53LP3 525 aaPredicted RBP11.4□□□□□ -0.59
SYNGAP1-207ENST00000628646 ALG10BQ5I7T1 473 aa11.4□□□□□ -0.59
SYNGAP1-207ENST00000628646 ATCAYQ86WG3 371 aa11.4□□□□□ -0.59
SYNGAP1-207ENST00000628646 TSSK6Q9BXA6 273 aa11.4□□□□□ -0.59
SYNGAP1-207ENST00000628646 SLC26A1Q9H2B4 701 aa11.4□□□□□ -0.59
SYNGAP1-207ENST00000628646 HHATLQ9HCP6 504 aa11.4□□□□□ -0.59
SYNGAP1-207ENST00000628646 TAS2R16Q9NYV7 291 aa11.4□□□□□ -0.59
SYNGAP1-207ENST00000628646 EFSO43281 561 aa11.39□□□□□ -0.59
SYNGAP1-207ENST00000628646 SOX14O95416 240 aa11.39□□□□□ -0.59
SYNGAP1-207ENST00000628646 STSP08842 583 aa11.39□□□□□ -0.59
SYNGAP1-207ENST00000628646 FUT7Q11130 342 aa11.39□□□□□ -0.59
SYNGAP1-207ENST00000628646 SPINK14Q6IE38 97 aa11.39□□□□□ -0.59
SYNGAP1-207ENST00000628646 AP3S1Q92572 193 aa11.39□□□□□ -0.59
SYNGAP1-207ENST00000628646 PMM1Q92871 262 aa11.39□□□□□ -0.59
SYNGAP1-207ENST00000628646 LMF1Q96S06 567 aa11.39□□□□□ -0.59
SYNGAP1-207ENST00000628646 CHCHD6Q9BRQ6 235 aa11.39□□□□□ -0.59
SYNGAP1-207ENST00000628646 DCSTAMPQ9H295 470 aa11.39□□□□□ -0.59
SYNGAP1-207ENST00000628646 RNF167Q9H6Y7 350 aa11.39□□□□□ -0.59
SYNGAP1-207ENST00000628646 SEC14L4Q9UDX3 406 aa11.39□□□□□ -0.59
SYNGAP1-207ENST00000628646 GPR55Q9Y2T6 319 aaPredicted RBP11.39□□□□□ -0.59
SYNGAP1-207ENST00000628646 TRAV17A0A0B4J275 112 aa11.39□□□□□ -0.59
SYNGAP1-207ENST00000628646 BOLA2-SMG1P6H3BVE0 249 aa11.39□□□□□ -0.59
SYNGAP1-207ENST00000628646 UMODP07911 640 aa11.39□□□□□ -0.59
SYNGAP1-207ENST00000628646 COX6A1P12074 109 aa11.39□□□□□ -0.59
SYNGAP1-207ENST00000628646 GADD45AP24522 165 aa11.39□□□□□ -0.59
SYNGAP1-207ENST00000628646 NDUFAF6Q330K2 333 aa11.39□□□□□ -0.59
SYNGAP1-207ENST00000628646 PDSS1Q5T2R2 415 aa11.39□□□□□ -0.59
SYNGAP1-207ENST00000628646 DTX4Q9Y2E6 619 aa11.39□□□□□ -0.59
SYNGAP1-207ENST00000628646 IGFBP1P08833 259 aaPredicted RBP11.39□□□□□ -0.59
SYNGAP1-207ENST00000628646 PNLIPRP2P54317 469 aa11.39□□□□□ -0.59
SYNGAP1-207ENST00000628646 PIN1Q13526 163 aaPredicted RBP11.39□□□□□ -0.59
SYNGAP1-207ENST00000628646 CBFBQ13951 182 aa11.39□□□□□ -0.59
SYNGAP1-207ENST00000628646 RTP5Q14D33 572 aa11.39□□□□□ -0.59
SYNGAP1-207ENST00000628646 ARHGAP11BQ3KRB8 267 aa11.39□□□□□ -0.59
SYNGAP1-207ENST00000628646 C9orf40Q8IXQ3 194 aa11.39□□□□□ -0.59
SYNGAP1-207ENST00000628646 CDCA4Q9BXL8 241 aa11.39□□□□□ -0.59
SYNGAP1-207ENST00000628646 ANKRD19PQ9H560 264 aa11.39□□□□□ -0.59
SYNGAP1-207ENST00000628646 GALNT9Q9HCQ5 603 aa11.39□□□□□ -0.59
SYNGAP1-207ENST00000628646 MMP25Q9NPA2 562 aa11.39□□□□□ -0.59
SYNGAP1-207ENST00000628646 MAN2C1Q9NTJ4 1040 aa11.39□□□□□ -0.59
SYNGAP1-207ENST00000628646 QPCTLQ9NXS2 382 aa11.39□□□□□ -0.59
SYNGAP1-207ENST00000628646 PPIEQ9UNP9 301 aaKnown RBP11.39□□□□□ -0.59
SYNGAP1-207ENST00000628646 LSM2Q9Y333 95 aaKnown RBP11.39□□□□□ -0.59
SYNGAP1-207ENST00000628646 PTPRQQ9UMZ3 2332 aa11.39□□□□□ -0.59
SYNGAP1-207ENST00000628646 KLF7O75840 302 aaPredicted RBP11.38□□□□□ -0.59
SYNGAP1-207ENST00000628646 CHRM4P08173 479 aa11.38□□□□□ -0.59
SYNGAP1-207ENST00000628646 HK1P19367 917 aa11.38□□□□□ -0.59
SYNGAP1-207ENST00000628646 ELAVL4P26378 380 aaKnown RBP11.38□□□□□ -0.59
SYNGAP1-207ENST00000628646 CASP6P55212 293 aa11.38□□□□□ -0.59
SYNGAP1-207ENST00000628646 EFNB1P98172 346 aa11.38□□□□□ -0.59
SYNGAP1-207ENST00000628646 PCOLCEQ15113 449 aa11.38□□□□□ -0.59
SYNGAP1-207ENST00000628646 ZNF721Q8TF20 911 aa11.38□□□□□ -0.59
SYNGAP1-207ENST00000628646 SNRNP27Q8WVK2 155 aaKnown RBP11.38□□□□□ -0.59
SYNGAP1-207ENST00000628646 DEFB127Q9H1M4 99 aa11.38□□□□□ -0.59
SYNGAP1-207ENST00000628646 A4GNTQ9UNA3 340 aa11.38□□□□□ -0.59
SYNGAP1-207ENST00000628646 EXOSC1Q9Y3B2 195 aaKnown RBP11.38□□□□□ -0.59
SYNGAP1-207ENST00000628646 METTL15A6NJ78 407 aa11.38□□□□□ -0.59
SYNGAP1-207ENST00000628646 NKX2-2O95096 273 aa11.38□□□□□ -0.59
SYNGAP1-207ENST00000628646 OR5F1O95221 314 aa11.38□□□□□ -0.59
SYNGAP1-207ENST00000628646 EVI2BP34910 448 aa11.38□□□□□ -0.59
SYNGAP1-207ENST00000628646 MAN2A2P49641 1150 aa11.38□□□□□ -0.59
SYNGAP1-207ENST00000628646 BCAP31P51572 246 aa11.38□□□□□ -0.59
SYNGAP1-207ENST00000628646 FAM180AQ6UWF9 173 aa11.38□□□□□ -0.59
SYNGAP1-207ENST00000628646 NUBPLQ8TB37 319 aa11.38□□□□□ -0.59
SYNGAP1-207ENST00000628646 CNOT9Q92600 299 aaKnown RBP11.38□□□□□ -0.59
SYNGAP1-207ENST00000628646 ZNF700Q9H0M5 742 aa11.38□□□□□ -0.59
SYNGAP1-207ENST00000628646 FBXO34Q9NWN3 711 aa11.38□□□□□ -0.59
SYNGAP1-207ENST00000628646 TRAPPC13A5PLN9 417 aa11.38□□□□□ -0.59
SYNGAP1-207ENST00000628646 TGFBR3LH3BV60 316 aa11.38□□□□□ -0.59
SYNGAP1-207ENST00000628646 CCRL2O00421 344 aa11.38□□□□□ -0.59
SYNGAP1-207ENST00000628646 CYC1P08574 325 aa11.38□□□□□ -0.59
SYNGAP1-207ENST00000628646 ADRB1P08588 477 aa11.38□□□□□ -0.59
SYNGAP1-207ENST00000628646 LSM11P83369 360 aaKnown RBP eCLIP11.38□□□□□ -0.59
SYNGAP1-207ENST00000628646 ZNF766Q5HY98 468 aa11.38□□□□□ -0.59
SYNGAP1-207ENST00000628646 SLC25A25Q6KCM7 469 aa11.38□□□□□ -0.59
SYNGAP1-207ENST00000628646 OR4C3Q8NH37 302 aa11.38□□□□□ -0.59
SYNGAP1-207ENST00000628646 CDADC1Q9BWV3 514 aa11.38□□□□□ -0.59
SYNGAP1-207ENST00000628646 MMP27Q9H306 513 aa11.38□□□□□ -0.59
SYNGAP1-207ENST00000628646 GPC6Q9Y625 555 aaPredicted RBP11.38□□□□□ -0.59
SYNGAP1-207ENST00000628646 CACNA1AO00555 2505 aa11.38□□□□□ -0.59
SYNGAP1-207ENST00000628646 ANKRD11Q6UB99 2663 aaPredicted RBP11.38□□□□□ -0.59
SYNGAP1-207ENST00000628646 IGLV3-12A0A075B6K2 115 aa11.38□□□□□ -0.59
SYNGAP1-207ENST00000628646 ABOP16442 354 aa11.38□□□□□ -0.59
SYNGAP1-207ENST00000628646 ZNF24P17028 368 aa11.38□□□□□ -0.59
SYNGAP1-207ENST00000628646 PRKAR1BP31321 381 aa11.38□□□□□ -0.59
SYNGAP1-207ENST00000628646 SLC6A8P48029 635 aa11.38□□□□□ -0.59
SYNGAP1-207ENST00000628646 CD97P48960 835 aa11.38□□□□□ -0.59
SYNGAP1-207ENST00000628646 MZT2AQ6P582 158 aa11.38□□□□□ -0.59
SYNGAP1-207ENST00000628646 TMEM205Q6UW68 189 aa11.38□□□□□ -0.59
SYNGAP1-207ENST00000628646 YRDCQ86U90 279 aaKnown RBP11.38□□□□□ -0.59
SYNGAP1-207ENST00000628646 GPAT4Q86UL3 456 aa11.38□□□□□ -0.59
SYNGAP1-207ENST00000628646 ACOT11Q8WXI4 607 aaPredicted RBP11.38□□□□□ -0.59
SYNGAP1-207ENST00000628646 TP53INP1Q96A56 240 aa11.38□□□□□ -0.59
SYNGAP1-207ENST00000628646 C1GALT1C1Q96EU7 318 aa11.38□□□□□ -0.59
SYNGAP1-207ENST00000628646 ASCL3Q9NQ33 180 aa11.38□□□□□ -0.59
SYNGAP1-207ENST00000628646 WDPCPO95876 746 aa11.37□□□□□ -0.59
SYNGAP1-207ENST00000628646 IFI30P13284 250 aa11.37□□□□□ -0.59
SYNGAP1-207ENST00000628646 PCYT1AP49585 367 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms