RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 C17orf78Q8N4C9 275 aa16.6■□□□□ 0.25
SMN1-211ENST00000625245 ARIH2OSQ8N7S6 290 aa16.6■□□□□ 0.25
SMN1-211ENST00000625245 ANKFN1Q8N957 763 aa16.6■□□□□ 0.25
SMN1-211ENST00000625245 C1orf162Q8NEQ5 155 aaPredicted RBP16.6■□□□□ 0.25
SMN1-211ENST00000625245 AMBRA1Q9C0C7 1298 aa16.6■□□□□ 0.25
SMN1-211ENST00000625245 TMEM160Q9NX00 188 aa16.6■□□□□ 0.25
SMN1-211ENST00000625245 MOKQ9UQ07 419 aa16.6■□□□□ 0.25
SMN1-211ENST00000625245 ZC3H12DA2A288 527 aaKnown RBP16.59■□□□□ 0.25
SMN1-211ENST00000625245 HMGN4O00479 90 aa16.59■□□□□ 0.25
SMN1-211ENST00000625245 KLF11O14901 512 aa16.59■□□□□ 0.25
SMN1-211ENST00000625245 ZNF208O43345 1280 aa16.59■□□□□ 0.25
SMN1-211ENST00000625245 WNT11O96014 354 aa16.59■□□□□ 0.25
SMN1-211ENST00000625245 F12P00748 615 aaPredicted RBP16.59■□□□□ 0.25
SMN1-211ENST00000625245 MYZAPP0CAP1 466 aa16.59■□□□□ 0.25
SMN1-211ENST00000625245 MPGP29372 298 aa16.59■□□□□ 0.25
SMN1-211ENST00000625245 S100A3P33764 101 aa16.59■□□□□ 0.25
SMN1-211ENST00000625245 PDLIM4P50479 330 aa16.59■□□□□ 0.25
SMN1-211ENST00000625245 GGTLC2Q14390 218 aa16.59■□□□□ 0.25
SMN1-211ENST00000625245 CASP8Q14790 479 aa16.59■□□□□ 0.25
SMN1-211ENST00000625245 SLC17A1Q14916 467 aa16.59■□□□□ 0.25
SMN1-211ENST00000625245 CHI3L2Q15782 390 aa16.59■□□□□ 0.25
SMN1-211ENST00000625245 SYPL1Q16563 259 aa16.59■□□□□ 0.25
SMN1-211ENST00000625245 CARTPTQ16568 116 aa16.59■□□□□ 0.25
SMN1-211ENST00000625245 OTUD3Q5T2D3 398 aaPredicted RBP16.59■□□□□ 0.25
SMN1-211ENST00000625245 AP1ARQ63HQ0 302 aa16.59■□□□□ 0.25
SMN1-211ENST00000625245 AAED1Q7RTV5 226 aa16.59■□□□□ 0.25
SMN1-211ENST00000625245 TESCQ96BS2 214 aa16.59■□□□□ 0.25
SMN1-211ENST00000625245 ROPN1BQ9BZX4 212 aaPredicted RBP16.59■□□□□ 0.25
SMN1-211ENST00000625245 ROPN1Q9HAT0 212 aaPredicted RBP16.59■□□□□ 0.25
SMN1-211ENST00000625245 TYROBPO43914 113 aa16.58■□□□□ 0.24
SMN1-211ENST00000625245 SLC1A3P43003 542 aa16.58■□□□□ 0.24
SMN1-211ENST00000625245 ETV4P43268 484 aa16.58■□□□□ 0.24
SMN1-211ENST00000625245 GZMKP49863 264 aa16.58■□□□□ 0.24
SMN1-211ENST00000625245 NME5P56597 212 aa16.58■□□□□ 0.24
SMN1-211ENST00000625245 ABCE1P61221 599 aaKnown RBP16.58■□□□□ 0.24
SMN1-211ENST00000625245 CEACAM7Q14002 265 aa16.58■□□□□ 0.24
SMN1-211ENST00000625245 FAM174BQ3ZCQ3 159 aa16.58■□□□□ 0.24
SMN1-211ENST00000625245 HIKESHIQ53FT3 197 aa16.58■□□□□ 0.24
SMN1-211ENST00000625245 PAQR6Q6TCH4 344 aa16.58■□□□□ 0.24
SMN1-211ENST00000625245 CMIPQ8IY22 773 aa16.58■□□□□ 0.24
SMN1-211ENST00000625245 TMEM99Q8N816 258 aa16.58■□□□□ 0.24
SMN1-211ENST00000625245 WDR60Q8WVS4 1066 aa16.58■□□□□ 0.24
SMN1-211ENST00000625245 C3orf49Q96BT1 292 aa16.58■□□□□ 0.24
SMN1-211ENST00000625245 TRNT1Q96Q11 434 aaKnown RBP16.58■□□□□ 0.24
SMN1-211ENST00000625245 SLC38A1Q9H2H9 487 aa16.58■□□□□ 0.24
SMN1-211ENST00000625245 CHODLQ9H9P2 273 aa16.58■□□□□ 0.24
SMN1-211ENST00000625245 FKBP7Q9Y680 259 aa16.58■□□□□ 0.24
SMN1-211ENST00000625245 CFAP73A6NFT4 308 aa16.57■□□□□ 0.24
SMN1-211ENST00000625245 AGAP5A6NIR3 686 aa16.57■□□□□ 0.24
SMN1-211ENST00000625245 KRT33AO76009 404 aa16.57■□□□□ 0.24
SMN1-211ENST00000625245 AKR7A3O95154 331 aa16.57■□□□□ 0.24
SMN1-211ENST00000625245 SERPINE1P05121 402 aa16.57■□□□□ 0.24
SMN1-211ENST00000625245 CHRM4P08173 479 aa16.57■□□□□ 0.24
SMN1-211ENST00000625245 UQCRBP14927 111 aa16.57■□□□□ 0.24
SMN1-211ENST00000625245 IL7RP16871 459 aa16.57■□□□□ 0.24
SMN1-211ENST00000625245 LBPP18428 481 aa16.57■□□□□ 0.24
SMN1-211ENST00000625245 CLNS1AP54105 237 aaKnown RBP16.57■□□□□ 0.24
SMN1-211ENST00000625245 GNA13Q14344 377 aa16.57■□□□□ 0.24
SMN1-211ENST00000625245 OR7A5Q15622 319 aa16.57■□□□□ 0.24
SMN1-211ENST00000625245 MST1LQ2TV78 715 aa16.57■□□□□ 0.24
SMN1-211ENST00000625245 KRTAP24-1Q3LI83 254 aa16.57■□□□□ 0.24
SMN1-211ENST00000625245 GPAT4Q86UL3 456 aa16.57■□□□□ 0.24
SMN1-211ENST00000625245 OR9K2Q8NGE7 335 aa16.57■□□□□ 0.24
SMN1-211ENST00000625245 AURKBQ96GD4 344 aaPredicted RBP16.57■□□□□ 0.24
SMN1-211ENST00000625245 ZNF385AQ96PM9 386 aaKnown RBP16.57■□□□□ 0.24
SMN1-211ENST00000625245 VRK1Q99986 396 aaPredicted RBP16.57■□□□□ 0.24
SMN1-211ENST00000625245 KCNS3Q9BQ31 491 aa16.57■□□□□ 0.24
SMN1-211ENST00000625245 MTHFD2LQ9H903 347 aaPredicted RBP16.57■□□□□ 0.24
SMN1-211ENST00000625245 KCNS2Q9ULS6 477 aa16.57■□□□□ 0.24
SMN1-211ENST00000625245 RAP2CQ9Y3L5 183 aa16.57■□□□□ 0.24
SMN1-211ENST00000625245 LOC100289279A0A1B0GTE1 492 aa16.56■□□□□ 0.24
SMN1-211ENST00000625245 CCDC154A6NI56 674 aa16.56■□□□□ 0.24
SMN1-211ENST00000625245 E9PBE3 544 aa16.56■□□□□ 0.24
SMN1-211ENST00000625245 GPIP06744 558 aa16.56■□□□□ 0.24
SMN1-211ENST00000625245 NR2F1P10589 423 aa16.56■□□□□ 0.24
SMN1-211ENST00000625245 SRD5A1P18405 259 aa16.56■□□□□ 0.24
SMN1-211ENST00000625245 CXCR1P25024 350 aa16.56■□□□□ 0.24
SMN1-211ENST00000625245 RPL14P50914 215 aaKnown RBP16.56■□□□□ 0.24
SMN1-211ENST00000625245 ANXA11P50995 505 aaKnown RBP16.56■□□□□ 0.24
SMN1-211ENST00000625245 SNRPD2P62316 118 aaKnown RBP16.56■□□□□ 0.24
SMN1-211ENST00000625245 SRSF2Q01130 221 aaKnown RBP16.56■□□□□ 0.24
SMN1-211ENST00000625245 EPS8Q12929 822 aa16.56■□□□□ 0.24
SMN1-211ENST00000625245 SWI5Q1ZZU3 235 aa16.56■□□□□ 0.24
SMN1-211ENST00000625245 DPY19L1Q2PZI1 675 aa16.56■□□□□ 0.24
SMN1-211ENST00000625245 MRPL2Q5T653 305 aaKnown RBP16.56■□□□□ 0.24
SMN1-211ENST00000625245 FAM166AQ6J272 317 aa16.56■□□□□ 0.24
SMN1-211ENST00000625245 LRRC74BQ6ZQY2 392 aa16.56■□□□□ 0.24
SMN1-211ENST00000625245 ZNF621Q6ZSS3 439 aa16.56■□□□□ 0.24
SMN1-211ENST00000625245 IL17RELQ6ZVW7 336 aa16.56■□□□□ 0.24
SMN1-211ENST00000625245 ZIC4Q8N9L1 334 aa16.56■□□□□ 0.24
SMN1-211ENST00000625245 POMGNT2Q8NAT1 580 aa16.56■□□□□ 0.24
SMN1-211ENST00000625245 PNPT1Q8TCS8 783 aaKnown RBP16.56■□□□□ 0.24
SMN1-211ENST00000625245 TMEM45BQ96B21 275 aa16.56■□□□□ 0.24
SMN1-211ENST00000625245 CCDC115Q96NT0 180 aa16.56■□□□□ 0.24
SMN1-211ENST00000625245 SORCS2Q96PQ0 1159 aa16.56■□□□□ 0.24
SMN1-211ENST00000625245 PANX1Q96RD7 426 aa16.56■□□□□ 0.24
SMN1-211ENST00000625245 PIMREGQ9BSJ6 248 aa16.56■□□□□ 0.24
SMN1-211ENST00000625245 NUF2Q9BZD4 464 aa16.56■□□□□ 0.24
SMN1-211ENST00000625245 BTNL2Q9UIR0 455 aa16.56■□□□□ 0.24
SMN1-211ENST00000625245 LIPT2A6NK58 231 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms