RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 SLC26A7Q8TE54 656 aa4.29□□□□□ -1.72
VPS29-212ENST00000621131 HSD17B8Q92506 261 aa4.29□□□□□ -1.72
VPS29-212ENST00000621131 SLC22A18Q96BI1 424 aa4.29□□□□□ -1.72
VPS29-212ENST00000621131 PYCR2Q96C36 320 aa4.29□□□□□ -1.72
VPS29-212ENST00000621131 CCDC124Q96CT7 223 aaKnown RBP4.29□□□□□ -1.72
VPS29-212ENST00000621131 ITCHQ96J02 903 aa4.29□□□□□ -1.72
VPS29-212ENST00000621131 ZNF582Q96NG8 517 aaPredicted RBP4.29□□□□□ -1.72
VPS29-212ENST00000621131 ANKRD27Q96NW4 1050 aa4.29□□□□□ -1.72
VPS29-212ENST00000621131 CDRT15Q96T59 188 aa4.29□□□□□ -1.72
VPS29-212ENST00000621131 NPAS2Q99743 824 aa4.29□□□□□ -1.72
VPS29-212ENST00000621131 AIF1LQ9BQI0 150 aa4.29□□□□□ -1.72
VPS29-212ENST00000621131 GSDMCQ9BYG8 508 aa4.29□□□□□ -1.72
VPS29-212ENST00000621131 OR52A5Q9H2C5 316 aa4.29□□□□□ -1.72
VPS29-212ENST00000621131 TUBB1Q9H4B7 451 aa4.29□□□□□ -1.72
VPS29-212ENST00000621131 IMP3Q9NV31 184 aaKnown RBP4.29□□□□□ -1.72
VPS29-212ENST00000621131 VPS29Q9UBQ0 182 aa4.29□□□□□ -1.72
VPS29-212ENST00000621131 MUTYHQ9UIF7 546 aa4.29□□□□□ -1.72
VPS29-212ENST00000621131 PSMD13Q9UNM6 376 aa4.29□□□□□ -1.72
VPS29-212ENST00000621131 KCNK6Q9Y257 313 aa4.29□□□□□ -1.72
VPS29-212ENST00000621131 SLC17A4Q9Y2C5 497 aa4.29□□□□□ -1.72
VPS29-212ENST00000621131 ITPR3Q14573 2671 aa4.29□□□□□ -1.72
VPS29-212ENST00000621131 AKAP13Q12802 2813 aa4.29□□□□□ -1.72
VPS29-212ENST00000621131 UBR5O95071 2799 aaPredicted RBP4.29□□□□□ -1.72
VPS29-212ENST00000621131 COL12A1Q99715 3063 aa4.28□□□□□ -1.72
VPS29-212ENST00000621131 ZFC3H1O60293 1989 aaKnown RBP4.28□□□□□ -1.72
VPS29-212ENST00000621131 KCNE1BA0A087WTH5 132 aa4.28□□□□□ -1.72
VPS29-212ENST00000621131 GNG14A0A1W2PPG7 69 aa4.28□□□□□ -1.72
VPS29-212ENST00000621131 OR5K4A6NMS3 321 aa4.28□□□□□ -1.72
VPS29-212ENST00000621131 A8MUI8 341 aa4.28□□□□□ -1.72
VPS29-212ENST00000621131 A8MZ25 164 aa4.28□□□□□ -1.72
VPS29-212ENST00000621131 FOXE1O00358 373 aaPredicted RBP4.28□□□□□ -1.72
VPS29-212ENST00000621131 TPD52L2O43399 206 aaKnown RBP4.28□□□□□ -1.72
VPS29-212ENST00000621131 BAG2O95816 211 aa4.28□□□□□ -1.72
VPS29-212ENST00000621131 IGLV3-19P01714 112 aa4.28□□□□□ -1.72
VPS29-212ENST00000621131 ACP2P11117 423 aa4.28□□□□□ -1.72
VPS29-212ENST00000621131 CTSEP14091 401 aa4.28□□□□□ -1.72
VPS29-212ENST00000621131 PRPS1L1P21108 318 aa4.28□□□□□ -1.72
VPS29-212ENST00000621131 PPIBP23284 216 aaKnown RBP4.28□□□□□ -1.72
VPS29-212ENST00000621131 VHLP40337 213 aa4.28□□□□□ -1.72
VPS29-212ENST00000621131 ACTR1BP42025 376 aa4.28□□□□□ -1.72
VPS29-212ENST00000621131 NKX2-1P43699 371 aaPredicted RBP4.28□□□□□ -1.72
VPS29-212ENST00000621131 RAB28P51157 221 aa4.28□□□□□ -1.72
VPS29-212ENST00000621131 CCR8P51685 355 aa4.28□□□□□ -1.72
VPS29-212ENST00000621131 DIO3P55073 304 aa4.28□□□□□ -1.72
VPS29-212ENST00000621131 SRP54P61011 504 aaKnown RBP4.28□□□□□ -1.72
VPS29-212ENST00000621131 ACTR3P61158 418 aa4.28□□□□□ -1.72
VPS29-212ENST00000621131 ACTR1AP61163 376 aa4.28□□□□□ -1.72
VPS29-212ENST00000621131 RPS18P62269 152 aaKnown RBP4.28□□□□□ -1.72
VPS29-212ENST00000621131 PPP2R2BQ00005 443 aa4.28□□□□□ -1.72
VPS29-212ENST00000621131 HMGCS1Q01581 520 aa4.28□□□□□ -1.72
VPS29-212ENST00000621131 SLC34A1Q06495 639 aa4.28□□□□□ -1.72
VPS29-212ENST00000621131 TGM3Q08188 693 aa4.28□□□□□ -1.72
VPS29-212ENST00000621131 ZNF763Q0D2J5 394 aa4.28□□□□□ -1.72
VPS29-212ENST00000621131 VPS26BQ4G0F5 336 aa4.28□□□□□ -1.72
VPS29-212ENST00000621131 ZNF658BQ4V348 819 aaPredicted RBP4.28□□□□□ -1.72
VPS29-212ENST00000621131 PYCR3Q53H96 274 aa4.28□□□□□ -1.72
VPS29-212ENST00000621131 TCHHL1Q5QJ38 904 aaPredicted RBP4.28□□□□□ -1.72
VPS29-212ENST00000621131 ANXA8L1Q5VT79 327 aa4.28□□□□□ -1.72
VPS29-212ENST00000621131 Q6ZSR9 355 aa4.28□□□□□ -1.72
VPS29-212ENST00000621131 ADCK2Q7Z695 626 aa4.28□□□□□ -1.72
VPS29-212ENST00000621131 OOSP2Q86WS3 158 aa4.28□□□□□ -1.72
VPS29-212ENST00000621131 DHFR2Q86XF0 187 aa4.28□□□□□ -1.72
VPS29-212ENST00000621131 ZNF547Q8IVP9 402 aa4.28□□□□□ -1.72
VPS29-212ENST00000621131 UBALD2Q8IYN6 164 aa4.28□□□□□ -1.72
VPS29-212ENST00000621131 DNAJC22Q8N4W6 341 aa4.28□□□□□ -1.72
VPS29-212ENST00000621131 MINDY1Q8N5J2 469 aa4.28□□□□□ -1.72
VPS29-212ENST00000621131 NATD1Q8N6N6 113 aa4.28□□□□□ -1.72
VPS29-212ENST00000621131 BMPERQ8N8U9 685 aa4.28□□□□□ -1.72
VPS29-212ENST00000621131 ZNF383Q8NA42 475 aa4.28□□□□□ -1.72
VPS29-212ENST00000621131 OR5AR1Q8NGP9 310 aa4.28□□□□□ -1.72
VPS29-212ENST00000621131 OR2L8Q8NGY9 312 aa4.28□□□□□ -1.72
VPS29-212ENST00000621131 OR2T11Q8NH01 316 aa4.28□□□□□ -1.72
VPS29-212ENST00000621131 CDC26Q8NHZ8 85 aa4.28□□□□□ -1.72
VPS29-212ENST00000621131 SLC13A3Q8WWT9 602 aa4.28□□□□□ -1.72
VPS29-212ENST00000621131 DAZLQ92904 295 aaKnown RBP4.28□□□□□ -1.72
VPS29-212ENST00000621131 NEIL2Q969S2 332 aa4.28□□□□□ -1.72
VPS29-212ENST00000621131 LRRC58Q96CX6 371 aa4.28□□□□□ -1.72
VPS29-212ENST00000621131 ASB9Q96DX5 294 aa4.28□□□□□ -1.72
VPS29-212ENST00000621131 WDR34Q96EX3 536 aa4.28□□□□□ -1.72
VPS29-212ENST00000621131 KCTD14Q9BQ13 255 aaPredicted RBP4.28□□□□□ -1.72
VPS29-212ENST00000621131 ACPTQ9BZG2 426 aa4.28□□□□□ -1.72
VPS29-212ENST00000621131 KIR3DX1Q9H7L2 352 aa4.28□□□□□ -1.72
VPS29-212ENST00000621131 NT5DC2Q9H857 520 aa4.28□□□□□ -1.72
VPS29-212ENST00000621131 YY1AP1Q9H869 796 aa4.28□□□□□ -1.72
VPS29-212ENST00000621131 LMAN1LQ9HAT1 526 aa4.28□□□□□ -1.72
VPS29-212ENST00000621131 IL1RL2Q9HB29 575 aa4.28□□□□□ -1.72
VPS29-212ENST00000621131 MRPS30Q9NP92 439 aaKnown RBP4.28□□□□□ -1.72
VPS29-212ENST00000621131 STX18Q9P2W9 335 aaKnown RBP4.28□□□□□ -1.72
VPS29-212ENST00000621131 GIMAP2Q9UG22 337 aa4.28□□□□□ -1.72
VPS29-212ENST00000621131 TAC3Q9UHF0 121 aa4.28□□□□□ -1.72
VPS29-212ENST00000621131 SLC7A8Q9UHI5 535 aa4.28□□□□□ -1.72
VPS29-212ENST00000621131 ZNF225Q9UK10 706 aa4.28□□□□□ -1.72
VPS29-212ENST00000621131 PIKFYVEQ9Y2I7 2098 aa4.28□□□□□ -1.72
VPS29-212ENST00000621131 FANCMQ8IYD8 2048 aa4.28□□□□□ -1.73
VPS29-212ENST00000621131 URADA6NGE7 173 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 EVPLLA8MZ36 301 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 FBP2O00757 339 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 ZW10O43264 779 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 LATO43561 262 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 ENTPD5O75356 428 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms