RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 KLHL9Q9P2J3 617 aa16.31■□□□□ 0.2
LITAF-220ENST00000620789 KLHL13Q9P2N7 655 aa16.31■□□□□ 0.2
LITAF-220ENST00000620789 CRYBG3Q68DQ2 2970 aa16.3■□□□□ 0.2
LITAF-220ENST00000620789 CENPEQ02224 2701 aa16.3■□□□□ 0.2
LITAF-220ENST00000620789 UNC79Q9P2D8 2635 aa16.3■□□□□ 0.2
LITAF-220ENST00000620789 MSTNO14793 375 aa16.3■□□□□ 0.2
LITAF-220ENST00000620789 EIF1BO60739 113 aaKnown RBP16.3■□□□□ 0.2
LITAF-220ENST00000620789 SMNDC1O75940 238 aaKnown RBP eCLIP16.3■□□□□ 0.2
LITAF-220ENST00000620789 CGAP01215 116 aa16.3■□□□□ 0.2
LITAF-220ENST00000620789 GPIP06744 558 aa16.3■□□□□ 0.2
LITAF-220ENST00000620789 CD8BP10966 210 aa16.3■□□□□ 0.2
LITAF-220ENST00000620789 GGT1P19440 569 aa16.3■□□□□ 0.2
LITAF-220ENST00000620789 TNFRSF1BP20333 461 aa16.3■□□□□ 0.2
LITAF-220ENST00000620789 CALB2P22676 271 aa16.3■□□□□ 0.2
LITAF-220ENST00000620789 AGTR1P30556 359 aa16.3■□□□□ 0.2
LITAF-220ENST00000620789 SELENOWP63302 87 aa16.3■□□□□ 0.2
LITAF-220ENST00000620789 SLC35A1P78382 337 aa16.3■□□□□ 0.2
LITAF-220ENST00000620789 RASGEF1BQ0VAM2 473 aa16.3■□□□□ 0.2
LITAF-220ENST00000620789 ENTPD8Q5MY95 495 aa16.3■□□□□ 0.2
LITAF-220ENST00000620789 ABLIM2Q6H8Q1 611 aa16.3■□□□□ 0.2
LITAF-220ENST00000620789 DEFB107AQ8IZN7 70 aa16.3■□□□□ 0.2
LITAF-220ENST00000620789 RNF148Q8N7C7 305 aa16.3■□□□□ 0.2
LITAF-220ENST00000620789 LZICQ8WZA0 190 aa16.3■□□□□ 0.2
LITAF-220ENST00000620789 RNASE6Q93091 150 aaKnown RBP16.3■□□□□ 0.2
LITAF-220ENST00000620789 PSD2Q9BQI7 771 aa16.3■□□□□ 0.2
LITAF-220ENST00000620789 ADPRHL2Q9NX46 363 aa16.3■□□□□ 0.2
LITAF-220ENST00000620789 FOXD3Q9UJU5 478 aaPredicted RBP16.3■□□□□ 0.2
LITAF-220ENST00000620789 PROCRQ9UNN8 238 aa16.3■□□□□ 0.2
LITAF-220ENST00000620789 A0A087WUJ7 227 aa16.29■□□□□ 0.2
LITAF-220ENST00000620789 LIPT2A6NK58 231 aa16.29■□□□□ 0.2
LITAF-220ENST00000620789 CPSF4LA6NMK7 179 aaKnown RBP16.29■□□□□ 0.2
LITAF-220ENST00000620789 A8MXE2 369 aa16.29■□□□□ 0.2
LITAF-220ENST00000620789 B2RBV5 119 aa16.29■□□□□ 0.2
LITAF-220ENST00000620789 AHSA1O95433 338 aa16.29■□□□□ 0.2
LITAF-220ENST00000620789 YES1P07947 543 aa16.29■□□□□ 0.2
LITAF-220ENST00000620789 T-ENOLP0DO92 83 aa16.29■□□□□ 0.2
LITAF-220ENST00000620789 HSD17B1P14061 328 aa16.29■□□□□ 0.2
LITAF-220ENST00000620789 COX6B1P14854 86 aa16.29■□□□□ 0.2
LITAF-220ENST00000620789 NCK1P16333 377 aa16.29■□□□□ 0.2
LITAF-220ENST00000620789 FPR1P21462 350 aa16.29■□□□□ 0.2
LITAF-220ENST00000620789 UQCRC1P31930 480 aa16.29■□□□□ 0.2
LITAF-220ENST00000620789 CPOXP36551 454 aa16.29■□□□□ 0.2
LITAF-220ENST00000620789 CDH12P55289 794 aa16.29■□□□□ 0.2
LITAF-220ENST00000620789 H3F3AP84243 136 aa16.29■□□□□ 0.2
LITAF-220ENST00000620789 EGR4Q05215 589 aa16.29■□□□□ 0.2
LITAF-220ENST00000620789 CEACAM7Q14002 265 aa16.29■□□□□ 0.2
LITAF-220ENST00000620789 OR7A5Q15622 319 aa16.29■□□□□ 0.2
LITAF-220ENST00000620789 SAMD4BQ5PRF9 694 aaKnown RBP16.29■□□□□ 0.2
LITAF-220ENST00000620789 TMEM201Q5SNT2 666 aa16.29■□□□□ 0.2
LITAF-220ENST00000620789 ZNF787Q6DD87 383 aa16.29■□□□□ 0.2
LITAF-220ENST00000620789 C5orf46Q6UWT4 87 aa16.29■□□□□ 0.2
LITAF-220ENST00000620789 MEX3BQ6ZN04 569 aaKnown RBP16.29■□□□□ 0.2
LITAF-220ENST00000620789 TRPM8Q7Z2W7 1104 aa16.29■□□□□ 0.2
LITAF-220ENST00000620789 TUSC5Q8IXB3 177 aa16.29■□□□□ 0.2
LITAF-220ENST00000620789 RNF217Q8TC41 542 aa16.29■□□□□ 0.2
LITAF-220ENST00000620789 ADAMTS16Q8TE57 1224 aa16.29■□□□□ 0.2
LITAF-220ENST00000620789 TPD52L3Q96J77 140 aa16.29■□□□□ 0.2
LITAF-220ENST00000620789 CDRT15Q96T59 188 aa16.29■□□□□ 0.2
LITAF-220ENST00000620789 SPOCK3Q9BQ16 436 aa16.29■□□□□ 0.2
LITAF-220ENST00000620789 TACO1Q9BSH4 297 aaKnown RBP16.29■□□□□ 0.2
LITAF-220ENST00000620789 RBM24Q9BX46 236 aaKnown RBP16.29■□□□□ 0.2
LITAF-220ENST00000620789 TAPBPLQ9BX59 468 aa16.29■□□□□ 0.2
LITAF-220ENST00000620789 OPN3Q9H1Y3 402 aaPredicted RBP16.29■□□□□ 0.2
LITAF-220ENST00000620789 BCO1Q9HAY6 547 aa16.29■□□□□ 0.2
LITAF-220ENST00000620789 EGFL7Q9UHF1 273 aa16.29■□□□□ 0.2
LITAF-220ENST00000620789 ING1Q9UK53 422 aaPredicted RBP16.29■□□□□ 0.2
LITAF-220ENST00000620789 CELSR2Q9HCU4 2923 aa16.28■□□□□ 0.2
LITAF-220ENST00000620789 IGKV1D-42A0A075B6H8 117 aa16.28■□□□□ 0.2
LITAF-220ENST00000620789 ZNF814B7Z6K7 855 aa16.28■□□□□ 0.2
LITAF-220ENST00000620789 CHP2O43745 196 aa16.28■□□□□ 0.2
LITAF-220ENST00000620789 SERPINA1P01009 418 aa16.28■□□□□ 0.2
LITAF-220ENST00000620789 OR1E2P47887 323 aa16.28■□□□□ 0.2
LITAF-220ENST00000620789 PDK3Q15120 406 aa16.28■□□□□ 0.2
LITAF-220ENST00000620789 FXNQ16595 210 aa16.28■□□□□ 0.2
LITAF-220ENST00000620789 PAQR6Q6TCH4 344 aa16.28■□□□□ 0.2
LITAF-220ENST00000620789 CBLL1Q75N03 491 aa16.28■□□□□ 0.2
LITAF-220ENST00000620789 TSPYL5Q86VY4 417 aaPredicted RBP16.28■□□□□ 0.2
LITAF-220ENST00000620789 DMRTC2Q8IXT2 367 aaPredicted RBP16.28■□□□□ 0.2
LITAF-220ENST00000620789 FAM156AQ8NDB6 213 aa16.28■□□□□ 0.2
LITAF-220ENST00000620789 RBM15BQ8NDT2 890 aaKnown RBP16.28■□□□□ 0.2
LITAF-220ENST00000620789 PIGXQ8TBF5 258 aa16.28■□□□□ 0.2
LITAF-220ENST00000620789 FAM162AQ96A26 154 aa16.28■□□□□ 0.2
LITAF-220ENST00000620789 KTI12Q96EK9 354 aaPredicted RBP16.28■□□□□ 0.2
LITAF-220ENST00000620789 NAA11Q9BSU3 229 aaPredicted RBP16.28■□□□□ 0.2
LITAF-220ENST00000620789 PTDSS2Q9BVG9 487 aa16.28■□□□□ 0.2
LITAF-220ENST00000620789 PLSCR4Q9NRQ2 329 aa16.28■□□□□ 0.2
LITAF-220ENST00000620789 GALNT8Q9NY28 637 aa16.28■□□□□ 0.2
LITAF-220ENST00000620789 CD300AQ9UGN4 299 aa16.28■□□□□ 0.2
LITAF-220ENST00000620789 NBPF19A0A087WUL8 3843 aa16.28■□□□□ 0.2
LITAF-220ENST00000620789 TRAPPC13A5PLN9 417 aa16.27■□□□□ 0.2
LITAF-220ENST00000620789 ZNF716A6NP11 495 aa16.27■□□□□ 0.2
LITAF-220ENST00000620789 ZNF724A8MTY0 619 aa16.27■□□□□ 0.2
LITAF-220ENST00000620789 HNRNPRO43390 633 aaKnown RBP16.27■□□□□ 0.2
LITAF-220ENST00000620789 ZNF682O95780 498 aa16.27■□□□□ 0.2
LITAF-220ENST00000620789 THY1P04216 161 aa16.27■□□□□ 0.2
LITAF-220ENST00000620789 TCN1P20061 433 aaPredicted RBP16.27■□□□□ 0.2
LITAF-220ENST00000620789 RPS5P46782 204 aaKnown RBP16.27■□□□□ 0.2
LITAF-220ENST00000620789 SPATS1Q496A3 300 aa16.27■□□□□ 0.2
LITAF-220ENST00000620789 GLYATQ6IB77 296 aa16.27■□□□□ 0.2
LITAF-220ENST00000620789 ZNF474Q6S9Z5 364 aaPredicted RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms