RNA–Protein interactions for RNA: ENST00000620507.4

RBFOX1-223, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-223ENST00000620507 CUTCQ9NTM9 273 aa8.49□□□□□ -1.05
RBFOX1-223ENST00000620507 SIGLEC7Q9Y286 467 aa8.49□□□□□ -1.05
RBFOX1-223ENST00000620507 ADAM18Q9Y3Q7 739 aa8.49□□□□□ -1.05
RBFOX1-223ENST00000620507 TVP23AA6NH52 213 aa8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 CT62P0C5K7 136 aa8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 HIST1H1CP16403 213 aaKnown RBP8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 EEF1A1P68104 462 aaKnown RBP8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 BDH1Q02338 343 aa8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 INSL4Q14641 139 aa8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 DPY19L2P2Q6ZN68 376 aa8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 CMIPQ8IY22 773 aa8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 OR5AK2Q8NH90 309 aa8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 GPBAR1Q8TDU6 330 aa8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 FCAMRQ8WWV6 532 aa8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 SLC25A18Q9H1K4 315 aa8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 LSM2Q9Y333 95 aaKnown RBP8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 CACNG2Q9Y698 323 aa8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 MN1Q10571 1320 aaPredicted RBP8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 TCF20Q9UGU0 1960 aaKnown RBP8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 A0A0G2JMP0 313 aa8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 A0A0X1KG70 313 aa8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 A0A1W2PPC4 97 aa8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 ZSCAN5BA6NJL1 495 aa8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 TNFSF14O43557 240 aa8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 PRKNO60260 465 aaPredicted RBP8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 DNAJB6O75190 326 aa8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 NKX2-2O95096 273 aa8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 NSA2O95478 260 aaKnown RBP8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 EMDP50402 254 aa8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 HCCSP53701 268 aa8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 BTBD16Q32M84 506 aa8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 KLHL24Q6TFL4 600 aa8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 BAIAP2L2Q6UXY1 529 aa8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 Q6ZS52 159 aa8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 MAMDC2Q7Z304 686 aaPredicted RBP8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 OR4M2Q8NGB6 313 aa8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 FAM174AQ8TBP5 190 aa8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 TRMT61AQ96FX7 289 aaKnown RBP8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 C10orf90Q96M02 699 aa8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 FUZQ9BT04 418 aa8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 ALG12Q9BV10 488 aa8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 CHIAQ9BZP6 476 aa8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 FAM60AQ9NP50 221 aa8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 MRPL15Q9P015 296 aaKnown RBP8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 DHCR7Q9UBM7 475 aaKnown RBP8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 SCN2AQ99250 2005 aa8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 TLCD2A6NGC4 264 aa8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 CDC40O60508 579 aaKnown RBP eCLIP8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 CELA2BP08218 269 aaPredicted RBP8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 UCHL1P09936 223 aa8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 GIMD1P0DJR0 217 aa8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 SNRPBP14678 240 aaKnown RBP8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 ELK1P19419 428 aa8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 CD1CP29017 333 aa8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 RBMS1P29558 406 aaKnown RBP8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 PTGS2P35354 604 aa8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 SLC6A8P48029 635 aa8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 MTFR2Q6P444 385 aa8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 KCTD18Q6PI47 426 aaPredicted RBP8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 THSD4Q6ZMP0 1018 aa8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 ZNF227Q86WZ6 799 aa8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 SLC43A2Q8N370 569 aa8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 LSM14AQ8ND56 463 aaKnown RBP8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 IL17RDQ8NFM7 739 aa8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 TMEM234Q8WY98 164 aa8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 RASD2Q96D21 266 aa8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 GIMAP5Q96F15 307 aa8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 AICDAQ9GZX7 198 aa8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 UCKL1Q9NWZ5 548 aa8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 ABRACLQ9P1F3 81 aa8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 CHST2Q9Y4C5 530 aa8.48□□□□□ -1.05
RBFOX1-223ENST00000620507 CENPVL1A0A0U1RR11 272 aa8.47□□□□□ -1.05
RBFOX1-223ENST00000620507 MAGEB4O15481 346 aaPredicted RBP8.47□□□□□ -1.05
RBFOX1-223ENST00000620507 SSX4O60224 188 aa8.47□□□□□ -1.05
RBFOX1-223ENST00000620507 GPRIN2O60269 458 aa8.47□□□□□ -1.05
RBFOX1-223ENST00000620507 RECKO95980 971 aa8.47□□□□□ -1.05
RBFOX1-223ENST00000620507 MAS1P04201 325 aa8.47□□□□□ -1.05
RBFOX1-223ENST00000620507 DRD5P21918 477 aa8.47□□□□□ -1.05
RBFOX1-223ENST00000620507 GNALP38405 381 aa8.47□□□□□ -1.05
RBFOX1-223ENST00000620507 CD79BP40259 229 aa8.47□□□□□ -1.05
RBFOX1-223ENST00000620507 TFF2Q03403 129 aa8.47□□□□□ -1.05
RBFOX1-223ENST00000620507 P2RY14Q15391 338 aa8.47□□□□□ -1.05
RBFOX1-223ENST00000620507 FAM27D1Q5T7N8 215 aa8.47□□□□□ -1.05
RBFOX1-223ENST00000620507 NKAIN2Q5VXU1 208 aa8.47□□□□□ -1.05
RBFOX1-223ENST00000620507 KIRREL2Q6UWL6 708 aa8.47□□□□□ -1.05
RBFOX1-223ENST00000620507 DNAJC5GQ8N7S2 189 aa8.47□□□□□ -1.05
RBFOX1-223ENST00000620507 ZNF511Q8NB15 262 aa8.47□□□□□ -1.05
RBFOX1-223ENST00000620507 OR4M1Q8NGD0 313 aa8.47□□□□□ -1.05
RBFOX1-223ENST00000620507 ZNF431Q8TF32 576 aaPredicted RBP8.47□□□□□ -1.05
RBFOX1-223ENST00000620507 Q96M85 177 aa8.47□□□□□ -1.05
RBFOX1-223ENST00000620507 OR14A2Q96R54 314 aa8.47□□□□□ -1.05
RBFOX1-223ENST00000620507 PRDM9Q9NQV7 894 aa8.47□□□□□ -1.05
RBFOX1-223ENST00000620507 KLRF1Q9NZS2 232 aa8.47□□□□□ -1.05
RBFOX1-223ENST00000620507 EIF3KQ9UBQ5 218 aaKnown RBP8.47□□□□□ -1.05
RBFOX1-223ENST00000620507 PLEKHB1Q9UF11 243 aaPredicted RBP8.47□□□□□ -1.05
RBFOX1-223ENST00000620507 URB1O60287 2271 aaKnown RBP8.47□□□□□ -1.05
RBFOX1-223ENST00000620507 NOTCH4Q99466 2003 aa8.47□□□□□ -1.05
RBFOX1-223ENST00000620507 ACOD1A6NK06 481 aa8.47□□□□□ -1.05
RBFOX1-223ENST00000620507 NPIPA5E9PKD4 350 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms