RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 LCN1P31025 176 aa7.7□□□□□ -1.18
GPC6-202ENST00000617456 SRD5A2P31213 254 aa7.7□□□□□ -1.18
GPC6-202ENST00000617456 WNT5AP41221 380 aa7.7□□□□□ -1.18
GPC6-202ENST00000617456 SLC15A1P46059 708 aa7.7□□□□□ -1.18
GPC6-202ENST00000617456 KCNJ5P48544 419 aa7.7□□□□□ -1.18
GPC6-202ENST00000617456 ALDH9A1P49189 494 aa7.7□□□□□ -1.18
GPC6-202ENST00000617456 TPTEP56180 551 aa7.7□□□□□ -1.18
GPC6-202ENST00000617456 CARD18P57730 90 aa7.7□□□□□ -1.18
GPC6-202ENST00000617456 HMGCS1Q01581 520 aa7.7□□□□□ -1.18
GPC6-202ENST00000617456 SLC18A2Q05940 514 aa7.7□□□□□ -1.18
GPC6-202ENST00000617456 GAB1Q13480 694 aa7.7□□□□□ -1.18
GPC6-202ENST00000617456 GANABQ14697 944 aaKnown RBP7.7□□□□□ -1.18
GPC6-202ENST00000617456 GLYR1Q49A26 553 aaPredicted RBP7.7□□□□□ -1.18
GPC6-202ENST00000617456 IQCCQ4KMZ1 466 aa7.7□□□□□ -1.18
GPC6-202ENST00000617456 TRMT12Q53H54 448 aaKnown RBP7.7□□□□□ -1.18
GPC6-202ENST00000617456 ZMAT1Q5H9K5 638 aa7.7□□□□□ -1.18
GPC6-202ENST00000617456 FAM71E1Q6IPT2 247 aa7.7□□□□□ -1.18
GPC6-202ENST00000617456 C3orf33Q6P1S2 294 aa7.7□□□□□ -1.18
GPC6-202ENST00000617456 FAM111BQ6SJ93 734 aa7.7□□□□□ -1.18
GPC6-202ENST00000617456 C5orf46Q6UWT4 87 aa7.7□□□□□ -1.18
GPC6-202ENST00000617456 C20orf204Q6ZNR8 217 aa7.7□□□□□ -1.18
GPC6-202ENST00000617456 FRMD7Q6ZUT3 714 aa7.7□□□□□ -1.18
GPC6-202ENST00000617456 ZNF550Q7Z398 422 aa7.7□□□□□ -1.18
GPC6-202ENST00000617456 PLCZ1Q86YW0 608 aa7.7□□□□□ -1.18
GPC6-202ENST00000617456 GSPT2Q8IYD1 628 aaKnown RBP7.7□□□□□ -1.18
GPC6-202ENST00000617456 FITM2Q8N6M3 262 aa7.7□□□□□ -1.18
GPC6-202ENST00000617456 CNEP1R1Q8N9A8 125 aa7.7□□□□□ -1.18
GPC6-202ENST00000617456 WDSUB1Q8N9V3 476 aa7.7□□□□□ -1.18
GPC6-202ENST00000617456 MAPK1IP1LQ8NDC0 245 aa7.7□□□□□ -1.18
GPC6-202ENST00000617456 ICA1LQ8NDH6 482 aa7.7□□□□□ -1.18
GPC6-202ENST00000617456 OR14L1PQ8NHC6 308 aa7.7□□□□□ -1.18
GPC6-202ENST00000617456 PIWIL2Q8TC59 973 aaKnown RBP7.7□□□□□ -1.18
GPC6-202ENST00000617456 RFKQ969G6 155 aa7.7□□□□□ -1.18
GPC6-202ENST00000617456 PHF21AQ96BD5 680 aa7.7□□□□□ -1.18
GPC6-202ENST00000617456 SLC7A6OSQ96CW6 309 aaPredicted RBP7.7□□□□□ -1.18
GPC6-202ENST00000617456 APOPT1Q96IL0 206 aa7.7□□□□□ -1.18
GPC6-202ENST00000617456 TRAF4Q9BUZ4 470 aaPredicted RBP7.7□□□□□ -1.18
GPC6-202ENST00000617456 TMEM109Q9BVC6 243 aa7.7□□□□□ -1.18
GPC6-202ENST00000617456 OSBPL11Q9BXB4 747 aa7.7□□□□□ -1.18
GPC6-202ENST00000617456 ITPAQ9BY32 194 aa7.7□□□□□ -1.18
GPC6-202ENST00000617456 C3orf14Q9HBI5 128 aa7.7□□□□□ -1.18
GPC6-202ENST00000617456 SPACA1Q9HBV2 294 aa7.7□□□□□ -1.18
GPC6-202ENST00000617456 MID1IP1Q9NPA3 183 aa7.7□□□□□ -1.18
GPC6-202ENST00000617456 MYNNQ9NPC7 610 aa7.7□□□□□ -1.18
GPC6-202ENST00000617456 SERHLQ9NQF3 203 aa7.7□□□□□ -1.18
GPC6-202ENST00000617456 COA4Q9NYJ1 87 aa7.7□□□□□ -1.18
GPC6-202ENST00000617456 ZNF226Q9NYT6 803 aa7.7□□□□□ -1.18
GPC6-202ENST00000617456 ACTR3BQ9P1U1 418 aa7.7□□□□□ -1.18
GPC6-202ENST00000617456 KLHL9Q9P2J3 617 aa7.7□□□□□ -1.18
GPC6-202ENST00000617456 HEY2Q9UBP5 337 aa7.7□□□□□ -1.18
GPC6-202ENST00000617456 PACSIN3Q9UKS6 424 aa7.7□□□□□ -1.18
GPC6-202ENST00000617456 C19orf53Q9UNZ5 99 aaPredicted RBP7.7□□□□□ -1.18
GPC6-202ENST00000617456 SAMHD1Q9Y3Z3 626 aaKnown RBP7.7□□□□□ -1.18
GPC6-202ENST00000617456 A0A1W2PNV4 684 aa7.69□□□□□ -1.18
GPC6-202ENST00000617456 A0A1W2PS29 197 aa7.69□□□□□ -1.18
GPC6-202ENST00000617456 PRAMEF25A6NGN4 478 aa7.69□□□□□ -1.18
GPC6-202ENST00000617456 LINC00587B1AMM8 73 aa7.69□□□□□ -1.18
GPC6-202ENST00000617456 H0YJX3 145 aa7.69□□□□□ -1.18
GPC6-202ENST00000617456 SLC28A1O00337 649 aa7.69□□□□□ -1.18
GPC6-202ENST00000617456 TM9SF1O15321 606 aa7.69□□□□□ -1.18
GPC6-202ENST00000617456 UGT2B11O75310 529 aa7.69□□□□□ -1.18
GPC6-202ENST00000617456 FKBP6O75344 327 aa7.69□□□□□ -1.18
GPC6-202ENST00000617456 SLC22A3O75751 556 aa7.69□□□□□ -1.18
GPC6-202ENST00000617456 HSPA4LO95757 839 aa7.69□□□□□ -1.18
GPC6-202ENST00000617456 PROCP04070 461 aa7.69□□□□□ -1.18
GPC6-202ENST00000617456 ACAA1P09110 424 aaPredicted RBP7.69□□□□□ -1.18
GPC6-202ENST00000617456 FAM153BP0C7A2 387 aa7.69□□□□□ -1.18
GPC6-202ENST00000617456 TSPAN8P19075 237 aa7.69□□□□□ -1.18
GPC6-202ENST00000617456 CRYGSP22914 178 aa7.69□□□□□ -1.18
GPC6-202ENST00000617456 PTGDSP41222 190 aa7.69□□□□□ -1.18
GPC6-202ENST00000617456 MC3RP41968 323 aa7.69□□□□□ -1.18
GPC6-202ENST00000617456 P2RY4P51582 365 aa7.69□□□□□ -1.18
GPC6-202ENST00000617456 GFRA1P56159 465 aa7.69□□□□□ -1.18
GPC6-202ENST00000617456 DSCR4P56555 118 aaPredicted RBP7.69□□□□□ -1.18
GPC6-202ENST00000617456 EEFSECP57772 596 aaKnown RBP7.69□□□□□ -1.18
GPC6-202ENST00000617456 SIRPAP78324 504 aa7.69□□□□□ -1.18
GPC6-202ENST00000617456 EXOSC7Q15024 291 aaKnown RBP7.69□□□□□ -1.18
GPC6-202ENST00000617456 KIAA0040Q15053 153 aa7.69□□□□□ -1.18
GPC6-202ENST00000617456 ZNHIT3Q15649 155 aaPredicted RBP7.69□□□□□ -1.18
GPC6-202ENST00000617456 NNATQ16517 81 aa7.69□□□□□ -1.18
GPC6-202ENST00000617456 IMPG1Q17R60 797 aa7.69□□□□□ -1.18
GPC6-202ENST00000617456 FAM153CQ494X1 144 aa7.69□□□□□ -1.18
GPC6-202ENST00000617456 YIF1BQ5BJH7 314 aa7.69□□□□□ -1.18
GPC6-202ENST00000617456 LIPMQ5VYY2 423 aa7.69□□□□□ -1.18
GPC6-202ENST00000617456 ZCCHC12Q6PEW1 402 aa7.69□□□□□ -1.18
GPC6-202ENST00000617456 RPS27LQ71UM5 84 aaKnown RBP7.69□□□□□ -1.18
GPC6-202ENST00000617456 P4HA3Q7Z4N8 544 aa7.69□□□□□ -1.18
GPC6-202ENST00000617456 HIPK1Q86Z02 1210 aa7.69□□□□□ -1.18
GPC6-202ENST00000617456 OR2L13Q8N349 312 aa7.69□□□□□ -1.18
GPC6-202ENST00000617456 TBC1D15Q8TC07 691 aa7.69□□□□□ -1.18
GPC6-202ENST00000617456 FAM216AQ8WUB2 273 aa7.69□□□□□ -1.18
GPC6-202ENST00000617456 HOXB13Q92826 284 aaPredicted RBP7.69□□□□□ -1.18
GPC6-202ENST00000617456 UFD1Q92890 307 aa7.69□□□□□ -1.18
GPC6-202ENST00000617456 WNT2BQ93097 391 aa7.69□□□□□ -1.18
GPC6-202ENST00000617456 MTERF3Q96E29 417 aa7.69□□□□□ -1.18
GPC6-202ENST00000617456 APIPQ96GX9 242 aa7.69□□□□□ -1.18
GPC6-202ENST00000617456 ELAC2Q9BQ52 826 aaKnown RBP7.69□□□□□ -1.18
GPC6-202ENST00000617456 SEC22CQ9BRL7 303 aa7.69□□□□□ -1.18
GPC6-202ENST00000617456 GSX2Q9BZM3 304 aa7.69□□□□□ -1.18
GPC6-202ENST00000617456 ROPN1BQ9BZX4 212 aaPredicted RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms