RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 SLC16A11Q8NCK7 471 aa12.39□□□□□ -0.43
PCDHA11-202ENST00000616325 NUP43Q8NFH3 380 aa12.39□□□□□ -0.43
PCDHA11-202ENST00000616325 HIST1H2ACQ93077 130 aa12.39□□□□□ -0.43
PCDHA11-202ENST00000616325 ZNF75AQ96N20 296 aa12.39□□□□□ -0.43
PCDHA11-202ENST00000616325 UBQLN3Q9H347 655 aa12.39□□□□□ -0.43
PCDHA11-202ENST00000616325 KLHL9Q9P2J3 617 aa12.39□□□□□ -0.43
PCDHA11-202ENST00000616325 TRAV27A0A087WT01 109 aa12.39□□□□□ -0.43
PCDHA11-202ENST00000616325 TUBAL3A6NHL2 446 aa12.39□□□□□ -0.43
PCDHA11-202ENST00000616325 NDUFS6O75380 124 aaKnown RBP12.39□□□□□ -0.43
PCDHA11-202ENST00000616325 TAS2R38P59533 333 aa12.39□□□□□ -0.43
PCDHA11-202ENST00000616325 SNRPEP62304 92 aaKnown RBP12.39□□□□□ -0.43
PCDHA11-202ENST00000616325 BTN3A2P78410 334 aa12.39□□□□□ -0.43
PCDHA11-202ENST00000616325 HFEQ30201 348 aa12.39□□□□□ -0.43
PCDHA11-202ENST00000616325 KLHDC8AQ8IYD2 350 aa12.39□□□□□ -0.43
PCDHA11-202ENST00000616325 OR52L1Q8NGH7 329 aa12.39□□□□□ -0.43
PCDHA11-202ENST00000616325 SMIM4Q8WVI0 70 aa12.39□□□□□ -0.43
PCDHA11-202ENST00000616325 DVL3Q92997 716 aaPredicted RBP12.39□□□□□ -0.43
PCDHA11-202ENST00000616325 C3orf49Q96BT1 292 aa12.39□□□□□ -0.43
PCDHA11-202ENST00000616325 CNRIP1Q96F85 164 aaPredicted RBP12.39□□□□□ -0.43
PCDHA11-202ENST00000616325 MICU1Q9BPX6 476 aa12.39□□□□□ -0.43
PCDHA11-202ENST00000616325 LHX9Q9NQ69 397 aa12.39□□□□□ -0.43
PCDHA11-202ENST00000616325 TXNL1O43396 289 aa12.38□□□□□ -0.43
PCDHA11-202ENST00000616325 KCNAB3O43448 404 aa12.38□□□□□ -0.43
PCDHA11-202ENST00000616325 SELENOFO60613 162 aa12.38□□□□□ -0.43
PCDHA11-202ENST00000616325 FARS2O95363 451 aaKnown RBP12.38□□□□□ -0.43
PCDHA11-202ENST00000616325 ATP1B1P05026 303 aa12.38□□□□□ -0.43
PCDHA11-202ENST00000616325 PDX1P52945 283 aa12.38□□□□□ -0.43
PCDHA11-202ENST00000616325 DLX5P56178 289 aa12.38□□□□□ -0.43
PCDHA11-202ENST00000616325 AP3S2P59780 193 aa12.38□□□□□ -0.43
PCDHA11-202ENST00000616325 RBMS3Q6XE24 437 aaKnown RBP12.38□□□□□ -0.43
PCDHA11-202ENST00000616325 SPAG16Q8N0X2 631 aa12.38□□□□□ -0.43
PCDHA11-202ENST00000616325 SNX33Q8WV41 574 aa12.38□□□□□ -0.43
PCDHA11-202ENST00000616325 TRIM43Q96BQ3 446 aaPredicted RBP12.38□□□□□ -0.43
PCDHA11-202ENST00000616325 ZMYND19Q96E35 227 aaPredicted RBP12.38□□□□□ -0.43
PCDHA11-202ENST00000616325 ZNF559Q9BR84 538 aa12.38□□□□□ -0.43
PCDHA11-202ENST00000616325 GNG8Q9UK08 70 aa12.38□□□□□ -0.43
PCDHA11-202ENST00000616325 TRBV2A0A0J9YWF9 115 aa12.38□□□□□ -0.43
PCDHA11-202ENST00000616325 CENPVL1A0A0U1RR11 272 aa12.38□□□□□ -0.43
PCDHA11-202ENST00000616325 SERTM1A2A2V5 107 aa12.38□□□□□ -0.43
PCDHA11-202ENST00000616325 PRAF2O60831 178 aa12.38□□□□□ -0.43
PCDHA11-202ENST00000616325 AKR7A3O95154 331 aa12.38□□□□□ -0.43
PCDHA11-202ENST00000616325 TGM6O95932 706 aa12.38□□□□□ -0.43
PCDHA11-202ENST00000616325 MANEAQ5SRI9 462 aa12.38□□□□□ -0.43
PCDHA11-202ENST00000616325 FIGNL1Q6PIW4 674 aa12.38□□□□□ -0.43
PCDHA11-202ENST00000616325 PUSL1Q8N0Z8 303 aaKnown RBP12.38□□□□□ -0.43
PCDHA11-202ENST00000616325 OR6V1Q8N148 313 aa12.38□□□□□ -0.43
PCDHA11-202ENST00000616325 PFN4Q8NHR9 129 aa12.38□□□□□ -0.43
PCDHA11-202ENST00000616325 OR7D2Q96RA2 312 aa12.38□□□□□ -0.43
PCDHA11-202ENST00000616325 NKX3-1Q99801 234 aaPredicted RBP12.38□□□□□ -0.43
PCDHA11-202ENST00000616325 PINK1Q9BXM7 581 aa12.38□□□□□ -0.43
PCDHA11-202ENST00000616325 MRPS18AQ9NVS2 196 aaKnown RBP12.38□□□□□ -0.43
PCDHA11-202ENST00000616325 SEC16AO15027 2179 aa12.38□□□□□ -0.43
PCDHA11-202ENST00000616325 A0A0G2JK05 382 aa12.37□□□□□ -0.43
PCDHA11-202ENST00000616325 A0A1B0GUH1 482 aa12.37□□□□□ -0.43
PCDHA11-202ENST00000616325 A0A1W2PR48 441 aa12.37□□□□□ -0.43
PCDHA11-202ENST00000616325 LRIT2A6NDA9 550 aa12.37□□□□□ -0.43
PCDHA11-202ENST00000616325 OR6C68A6NDL8 312 aa12.37□□□□□ -0.43
PCDHA11-202ENST00000616325 FAM171A2A8MVW0 826 aa12.37□□□□□ -0.43
PCDHA11-202ENST00000616325 GMFGO60234 142 aa12.37□□□□□ -0.43
PCDHA11-202ENST00000616325 RPP14O95059 124 aaKnown RBP12.37□□□□□ -0.43
PCDHA11-202ENST00000616325 HMGN1P05114 100 aa12.37□□□□□ -0.43
PCDHA11-202ENST00000616325 ADH1AP07327 375 aa12.37□□□□□ -0.43
PCDHA11-202ENST00000616325 ADRB3P13945 408 aa12.37□□□□□ -0.43
PCDHA11-202ENST00000616325 EDNRAP25101 427 aa12.37□□□□□ -0.43
PCDHA11-202ENST00000616325 EFNB1P98172 346 aa12.37□□□□□ -0.43
PCDHA11-202ENST00000616325 PCGF3Q3KNV8 242 aa12.37□□□□□ -0.43
PCDHA11-202ENST00000616325 GXYLT1Q4G148 440 aa12.37□□□□□ -0.43
PCDHA11-202ENST00000616325 PABPC1L2AQ5JQF8 200 aa12.37□□□□□ -0.43
PCDHA11-202ENST00000616325 UNQ6126/PRO20091Q6UXV3 157 aa12.37□□□□□ -0.43
PCDHA11-202ENST00000616325 SPRED2Q7Z698 418 aa12.37□□□□□ -0.43
PCDHA11-202ENST00000616325 STK35Q8TDR2 534 aa12.37□□□□□ -0.43
PCDHA11-202ENST00000616325 CDS1Q92903 461 aa12.37□□□□□ -0.43
PCDHA11-202ENST00000616325 MRGPRX3Q96LB0 322 aa12.37□□□□□ -0.43
PCDHA11-202ENST00000616325 NPDC1Q9NQX5 325 aaPredicted RBP12.37□□□□□ -0.43
PCDHA11-202ENST00000616325 FUT5Q11128 374 aa12.37□□□□□ -0.43
PCDHA11-202ENST00000616325 DHCR24Q15392 516 aa12.37□□□□□ -0.43
PCDHA11-202ENST00000616325 CCDC157Q569K6 752 aa12.37□□□□□ -0.43
PCDHA11-202ENST00000616325 SLC25A30Q5SVS4 291 aa12.37□□□□□ -0.43
PCDHA11-202ENST00000616325 MEPCEQ7L2J0 689 aaKnown RBP12.37□□□□□ -0.43
PCDHA11-202ENST00000616325 LRRC56Q8IYG6 542 aaPredicted RBP12.37□□□□□ -0.43
PCDHA11-202ENST00000616325 RFLNBQ8N5W9 214 aa12.37□□□□□ -0.43
PCDHA11-202ENST00000616325 ACOT4Q8N9L9 421 aa12.37□□□□□ -0.43
PCDHA11-202ENST00000616325 LINC01555Q8NAE3 123 aa12.37□□□□□ -0.43
PCDHA11-202ENST00000616325 OR5T2Q8NGG2 359 aa12.37□□□□□ -0.43
PCDHA11-202ENST00000616325 SYNPRQ8TBG9 265 aa12.37□□□□□ -0.43
PCDHA11-202ENST00000616325 OPN4Q9UHM6 478 aa12.37□□□□□ -0.43
PCDHA11-202ENST00000616325 ZNF230Q9UIE0 474 aaPredicted RBP12.37□□□□□ -0.43
PCDHA11-202ENST00000616325 MOKQ9UQ07 419 aa12.37□□□□□ -0.43
PCDHA11-202ENST00000616325 PLXNB3Q9ULL4 1909 aa12.37□□□□□ -0.43
PCDHA11-202ENST00000616325 C4orf51C9J302 202 aa12.37□□□□□ -0.43
PCDHA11-202ENST00000616325 GALR3O60755 368 aaPredicted RBP12.37□□□□□ -0.43
PCDHA11-202ENST00000616325 TEAD1P28347 426 aa12.37□□□□□ -0.43
PCDHA11-202ENST00000616325 HAAOP46952 286 aa12.37□□□□□ -0.43
PCDHA11-202ENST00000616325 RBM39Q14498 530 aaKnown RBP12.37□□□□□ -0.43
PCDHA11-202ENST00000616325 ZNF600Q6ZNG1 722 aa12.37□□□□□ -0.43
PCDHA11-202ENST00000616325 UBE3DQ7Z6J8 389 aa12.37□□□□□ -0.43
PCDHA11-202ENST00000616325 TPRA1Q86W33 373 aa12.37□□□□□ -0.43
PCDHA11-202ENST00000616325 CMIPQ8IY22 773 aa12.37□□□□□ -0.43
PCDHA11-202ENST00000616325 SUN3Q8TAQ9 357 aa12.37□□□□□ -0.43
PCDHA11-202ENST00000616325 THEM6Q8WUY1 208 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms