RNA–Protein interactions for RNA: ENST00000616236.1

RFC3-203, Transcript of replication factor C subunit 3, humanhuman

TSL 3

Gene RFC3, Length 612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-203ENST00000616236 OXGR1Q96P68 337 aa4.11□□□□□ -1.75
RFC3-203ENST00000616236 TBX15Q96SF7 602 aa4.11□□□□□ -1.75
RFC3-203ENST00000616236 LGMNQ99538 433 aa4.11□□□□□ -1.75
RFC3-203ENST00000616236 EPYCQ99645 322 aa4.11□□□□□ -1.75
RFC3-203ENST00000616236 ATP5SQ99766 215 aa4.11□□□□□ -1.75
RFC3-203ENST00000616236 HCAR1Q9BXC0 346 aa4.11□□□□□ -1.75
RFC3-203ENST00000616236 KRTAP4-2Q9BYR5 136 aa4.11□□□□□ -1.75
RFC3-203ENST00000616236 RBKSQ9H477 322 aa4.11□□□□□ -1.75
RFC3-203ENST00000616236 NANSQ9NR45 359 aa4.11□□□□□ -1.75
RFC3-203ENST00000616236 PNO1Q9NRX1 252 aaKnown RBP4.11□□□□□ -1.75
RFC3-203ENST00000616236 THUMPD1Q9NXG2 353 aaKnown RBP4.11□□□□□ -1.75
RFC3-203ENST00000616236 NDE1Q9NXR1 346 aa4.11□□□□□ -1.75
RFC3-203ENST00000616236 TMEM181Q9P2C4 612 aa4.11□□□□□ -1.75
RFC3-203ENST00000616236 TMCO1Q9UM00 188 aa4.11□□□□□ -1.75
RFC3-203ENST00000616236 COPS3Q9UNS2 423 aa4.11□□□□□ -1.75
RFC3-203ENST00000616236 L3MBTL1Q9Y468 752 aa4.11□□□□□ -1.75
RFC3-203ENST00000616236 CLSPNQ9HAW4 1339 aa4.11□□□□□ -1.75
RFC3-203ENST00000616236 USP47Q96K76 1375 aa4.11□□□□□ -1.75
RFC3-203ENST00000616236 NEURL4Q96JN8 1562 aa4.1□□□□□ -1.75
RFC3-203ENST00000616236 IGHV3OR16-12A0A075B7B8 117 aa4.1□□□□□ -1.75
RFC3-203ENST00000616236 IGHV4-30-2A0A087WSY4 118 aa4.1□□□□□ -1.75
RFC3-203ENST00000616236 LOC100131303A0A0U1RQF7 123 aa4.1□□□□□ -1.75
RFC3-203ENST00000616236 KBTBD11-OT1A0A1B0GTJ5 212 aa4.1□□□□□ -1.75
RFC3-203ENST00000616236 A0A1B0GUH1 482 aa4.1□□□□□ -1.75
RFC3-203ENST00000616236 SERPINE3A8MV23 424 aa4.1□□□□□ -1.75
RFC3-203ENST00000616236 HSBP1L1C9JCN9 74 aa4.1□□□□□ -1.75
RFC3-203ENST00000616236 PRR23D1E9PI22 279 aaPredicted RBP4.1□□□□□ -1.75
RFC3-203ENST00000616236 GFYI3L273 518 aa4.1□□□□□ -1.75
RFC3-203ENST00000616236 K7ERQ8 282 aa4.1□□□□□ -1.75
RFC3-203ENST00000616236 ACOT8O14734 319 aa4.1□□□□□ -1.75
RFC3-203ENST00000616236 AIM2O14862 343 aa4.1□□□□□ -1.75
RFC3-203ENST00000616236 RRP8O43159 456 aaKnown RBP4.1□□□□□ -1.75
RFC3-203ENST00000616236 CHST1O43916 411 aa4.1□□□□□ -1.75
RFC3-203ENST00000616236 KRT36O76013 467 aa4.1□□□□□ -1.75
RFC3-203ENST00000616236 DUS4LO95620 317 aaKnown RBP4.1□□□□□ -1.75
RFC3-203ENST00000616236 SERPINB2P05120 415 aa4.1□□□□□ -1.75
RFC3-203ENST00000616236 SERPINE2P07093 398 aa4.1□□□□□ -1.75
RFC3-203ENST00000616236 UBCP0CG48 685 aaKnown RBP4.1□□□□□ -1.75
RFC3-203ENST00000616236 PRR23D2P0DMB1 279 aaPredicted RBP4.1□□□□□ -1.75
RFC3-203ENST00000616236 ZNF10P21506 573 aaPredicted RBP4.1□□□□□ -1.75
RFC3-203ENST00000616236 BCKDHBP21953 392 aa4.1□□□□□ -1.75
RFC3-203ENST00000616236 SLC1A2P43004 574 aa4.1□□□□□ -1.75
RFC3-203ENST00000616236 OR1D4P47884 311 aa4.1□□□□□ -1.75
RFC3-203ENST00000616236 HMGCS2P54868 508 aa4.1□□□□□ -1.75
RFC3-203ENST00000616236 DLX5P56178 289 aa4.1□□□□□ -1.75
RFC3-203ENST00000616236 TMEM50BP56557 158 aa4.1□□□□□ -1.75
RFC3-203ENST00000616236 MRPS21P82921 87 aaKnown RBP4.1□□□□□ -1.75
RFC3-203ENST00000616236 FASTKD3Q14CZ7 662 aaKnown RBP4.1□□□□□ -1.75
RFC3-203ENST00000616236 FAM83EQ2M2I3 478 aa4.1□□□□□ -1.75
RFC3-203ENST00000616236 CNPY1Q3B7I2 92 aa4.1□□□□□ -1.75
RFC3-203ENST00000616236 KRT71Q3SY84 523 aa4.1□□□□□ -1.75
RFC3-203ENST00000616236 MOGAT2Q3SYC2 334 aa4.1□□□□□ -1.75
RFC3-203ENST00000616236 VWA2Q5GFL6 755 aa4.1□□□□□ -1.75
RFC3-203ENST00000616236 LCE4AQ5TA78 99 aa4.1□□□□□ -1.75
RFC3-203ENST00000616236 BSPRYQ5W0U4 402 aa4.1□□□□□ -1.75
RFC3-203ENST00000616236 SLC25A25Q6KCM7 469 aa4.1□□□□□ -1.75
RFC3-203ENST00000616236 RFWD3Q6PCD5 774 aa4.1□□□□□ -1.75
RFC3-203ENST00000616236 DBX2Q6ZNG2 339 aa4.1□□□□□ -1.75
RFC3-203ENST00000616236 Q6ZSR3 168 aa4.1□□□□□ -1.75
RFC3-203ENST00000616236 CSNK1A1LQ8N752 337 aa4.1□□□□□ -1.75
RFC3-203ENST00000616236 FLVCR1-AS1Q8TAF5 88 aa4.1□□□□□ -1.75
RFC3-203ENST00000616236 ZNF596Q8TC21 504 aa4.1□□□□□ -1.75
RFC3-203ENST00000616236 ZPLD1Q8TCW7 415 aa4.1□□□□□ -1.75
RFC3-203ENST00000616236 NR4A3Q92570 626 aa4.1□□□□□ -1.75
RFC3-203ENST00000616236 TAF15Q92804 592 aaKnown RBP eCLIP4.1□□□□□ -1.75
RFC3-203ENST00000616236 MSANTD3Q96H12 275 aa4.1□□□□□ -1.75
RFC3-203ENST00000616236 SLC29A1Q99808 456 aa4.1□□□□□ -1.75
RFC3-203ENST00000616236 SYT15Q9BQS2 421 aa4.1□□□□□ -1.75
RFC3-203ENST00000616236 NEUROG2Q9H2A3 272 aa4.1□□□□□ -1.75
RFC3-203ENST00000616236 OR51M1Q9H341 326 aa4.1□□□□□ -1.75
RFC3-203ENST00000616236 ZNF385DQ9H6B1 395 aa4.1□□□□□ -1.75
RFC3-203ENST00000616236 ZNF556Q9HAH1 456 aa4.1□□□□□ -1.75
RFC3-203ENST00000616236 B3GNT2Q9NY97 397 aa4.1□□□□□ -1.75
RFC3-203ENST00000616236 CLN8Q9UBY8 286 aa4.1□□□□□ -1.75
RFC3-203ENST00000616236 RIMS3Q9UJD0 308 aa4.1□□□□□ -1.75
RFC3-203ENST00000616236 SAMD4AQ9UPU9 718 aaKnown RBP4.1□□□□□ -1.75
RFC3-203ENST00000616236 RNF24Q9Y225 148 aa4.1□□□□□ -1.75
RFC3-203ENST00000616236 MMP24Q9Y5R2 645 aa4.1□□□□□ -1.75
RFC3-203ENST00000616236 MROH7-TTC4A0A0A0MT08 1334 aa4.1□□□□□ -1.75
RFC3-203ENST00000616236 NSG1A0A0A6YYJ2 146 aa4.09□□□□□ -1.75
RFC3-203ENST00000616236 OR5B21A6NL26 309 aa4.09□□□□□ -1.75
RFC3-203ENST00000616236 LRRIQ3A6PVS8 624 aaPredicted RBP4.09□□□□□ -1.75
RFC3-203ENST00000616236 E9PLD3 99 aa4.09□□□□□ -1.75
RFC3-203ENST00000616236 NTN3O00634 580 aaPredicted RBP4.09□□□□□ -1.75
RFC3-203ENST00000616236 HUS1O60921 280 aa4.09□□□□□ -1.75
RFC3-203ENST00000616236 STAMBPO95630 424 aa4.09□□□□□ -1.75
RFC3-203ENST00000616236 SEMA4FO95754 770 aa4.09□□□□□ -1.75
RFC3-203ENST00000616236 HOXD4P09016 255 aaPredicted RBP4.09□□□□□ -1.75
RFC3-203ENST00000616236 GATA1P15976 413 aaPredicted RBP4.09□□□□□ -1.75
RFC3-203ENST00000616236 DDOSTP39656 456 aa4.09□□□□□ -1.75
RFC3-203ENST00000616236 ANP32AP39687 249 aaKnown RBP4.09□□□□□ -1.75
RFC3-203ENST00000616236 VHLP40337 213 aa4.09□□□□□ -1.75
RFC3-203ENST00000616236 NAA10P41227 235 aaPredicted RBP4.09□□□□□ -1.75
RFC3-203ENST00000616236 ELK3P41970 407 aa4.09□□□□□ -1.75
RFC3-203ENST00000616236 NSG1P42857 185 aa4.09□□□□□ -1.75
RFC3-203ENST00000616236 TMED10P49755 219 aaKnown RBP4.09□□□□□ -1.75
RFC3-203ENST00000616236 KPNA2P52292 529 aaKnown RBP4.09□□□□□ -1.75
RFC3-203ENST00000616236 ARHGDIBP52566 201 aa4.09□□□□□ -1.75
RFC3-203ENST00000616236 HMGA2P52926 109 aa4.09□□□□□ -1.75
RFC3-203ENST00000616236 SLAQ13239 276 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms