RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 RPL22L1Q6P5R6 122 aaKnown RBP5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 GKN2Q86XP6 184 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 PRR22Q8IZ63 422 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 OR2L13Q8N349 312 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 ARL14Q8N4G2 192 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 TMEM234Q8WY98 164 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 TSSK2Q96PF2 358 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 GON7Q9BXV9 100 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 ACTR6Q9GZN1 396 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 NXF5Q9H1B4 397 aaKnown RBP5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 LYRM4Q9HD34 91 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 ISYNA1Q9NPH2 558 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 MAN2C1Q9NTJ4 1040 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 ABRACLQ9P1F3 81 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 ACAD8Q9UKU7 415 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 CBLCQ9ULV8 474 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 MMP17Q9ULZ9 603 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 WNK1Q9H4A3 2382 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 TRAV18A0A075B6X5 111 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 L7N2F9 121 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 HYAL3O43820 417 aaPredicted RBP5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 UCHL1P09936 223 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 PSMB1P20618 241 aaKnown RBP5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 CRYBB2P43320 205 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 RAB38P57729 211 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 CDK5Q00535 292 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 MLC1Q15049 377 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 BTBD16Q32M84 506 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 NIPAL3Q6P499 406 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 SLC29A4Q7RTT9 530 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 MAMDC2Q7Z304 686 aaPredicted RBP5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 POGLUT1Q8NBL1 392 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 TP53I13Q8NBR0 393 aaPredicted RBP5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 CEP76Q8TAP6 659 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 SLC2A12Q8TD20 617 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 TRMT61AQ96FX7 289 aaKnown RBP5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 LMF2Q9BU23 707 aaKnown RBP5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 HOXD1Q9GZZ0 328 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 SLC25A18Q9H1K4 315 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 LHX9Q9NQ69 397 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 RDH8Q9NYR8 311 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 WSB2Q9NYS7 404 aaPredicted RBP5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 MRPL15Q9P015 296 aaKnown RBP5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 RCE1Q9Y256 329 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 SIGLEC7Q9Y286 467 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 IGKV1-8A0A0C4DH67 115 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 A0A1W2PQ72 361 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 METTL21EPA6NDL7 271 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 TMEM229AB2RXF0 380 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 ZNF264O43296 627 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 RAD1O60671 282 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 TRAPPC2P0DI81 140 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 TRAPPC2BP0DI82 140 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 ENDOUP21128 410 aaKnown RBP5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 RORAP35398 523 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 KIR2DL1P43626 348 aaPredicted RBP5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 MTNR1BP49286 362 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 CSNK1EP49674 416 aaKnown RBP5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 GPR50Q13585 617 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 KIRREL2Q6UWL6 708 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 ESPNLQ6ZVH7 1005 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 TMPRSS11FQ6ZWK6 438 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 BMFQ96LC9 184 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 GPER1Q99527 375 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 ZNF350Q9GZX5 532 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 GALNT9Q9HCQ5 603 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 PIP5K1CO60331 668 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 SLC16A7O60669 478 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 NCR1O76036 304 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 NKX2-2O95096 273 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 EML2O95834 649 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 PNMTP11086 282 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 OC90Q02509 493 aaPredicted RBP5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 RPL6Q02878 288 aaKnown RBP5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 KLHL24Q6TFL4 600 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 FCRLAQ7L513 359 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 C16orf52Q8NHV5 167 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 SMAP2Q8WU79 429 aaPredicted RBP5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 KLHL15Q96M94 604 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 SPTY2D1-AS1A0A0U1RR47 76 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 ZC3H12DA2A288 527 aaKnown RBP5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 DCDC2BA2VCK2 349 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 RNF13O43567 381 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 SSX4O60224 188 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 KCNK2O95069 426 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 NTN1O95631 604 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 TBX6O95947 436 aaPredicted RBP5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 TNFRSF4P43489 277 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 DIO1P49895 249 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 FCN2Q15485 313 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 C4orf46Q504U0 113 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 GARNL3Q5VVW2 1013 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 DNM1P34Q6PK57 102 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 SHISA6Q6ZSJ9 500 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 PLCZ1Q86YW0 608 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 PLXDC1Q8IUK5 500 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 FTMTQ8N4E7 242 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 OR4M1Q8NGD0 313 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 ADAMTS18Q8TE60 1221 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 CREB3L1Q96BA8 519 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms