RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 MREGQ8N565 214 aa18.22■□□□□ 0.51
TRAPPC3-208ENST00000616074 PANX1Q96RD7 426 aa18.22■□□□□ 0.51
TRAPPC3-208ENST00000616074 NAA11Q9BSU3 229 aaPredicted RBP18.22■□□□□ 0.51
TRAPPC3-208ENST00000616074 REPIN1Q9BWE0 567 aaKnown RBP18.22■□□□□ 0.51
TRAPPC3-208ENST00000616074 SLC17A5Q9NRA2 495 aa18.22■□□□□ 0.51
TRAPPC3-208ENST00000616074 UPB1Q9UBR1 384 aa18.22■□□□□ 0.51
TRAPPC3-208ENST00000616074 DCTN4Q9UJW0 460 aa18.22■□□□□ 0.51
TRAPPC3-208ENST00000616074 A8MV72 311 aaPredicted RBP18.21■□□□□ 0.51
TRAPPC3-208ENST00000616074 FAAHO00519 579 aa18.21■□□□□ 0.51
TRAPPC3-208ENST00000616074 SLC1A3P43003 542 aa18.21■□□□□ 0.51
TRAPPC3-208ENST00000616074 EPS8Q12929 822 aa18.21■□□□□ 0.51
TRAPPC3-208ENST00000616074 MPP2Q14168 576 aa18.21■□□□□ 0.51
TRAPPC3-208ENST00000616074 RAB35Q15286 201 aa18.21■□□□□ 0.51
TRAPPC3-208ENST00000616074 COX20Q5RI15 118 aa18.21■□□□□ 0.51
TRAPPC3-208ENST00000616074 MRPL2Q5T653 305 aaKnown RBP18.21■□□□□ 0.51
TRAPPC3-208ENST00000616074 ZNF544Q6NX49 715 aa18.21■□□□□ 0.51
TRAPPC3-208ENST00000616074 KIRREL3Q8IZU9 778 aa18.21■□□□□ 0.51
TRAPPC3-208ENST00000616074 C17orf78Q8N4C9 275 aa18.21■□□□□ 0.51
TRAPPC3-208ENST00000616074 ZNF525Q8N782 197 aa18.21■□□□□ 0.51
TRAPPC3-208ENST00000616074 TRIML2Q8N7C3 387 aa18.21■□□□□ 0.51
TRAPPC3-208ENST00000616074 C1orf162Q8NEQ5 155 aaPredicted RBP18.21■□□□□ 0.51
TRAPPC3-208ENST00000616074 PNPT1Q8TCS8 783 aaKnown RBP18.21■□□□□ 0.51
TRAPPC3-208ENST00000616074 PMM1Q92871 262 aa18.21■□□□□ 0.51
TRAPPC3-208ENST00000616074 AIG1Q9NVV5 245 aa18.21■□□□□ 0.51
TRAPPC3-208ENST00000616074 PARPBPQ9NWS1 579 aa18.21■□□□□ 0.51
TRAPPC3-208ENST00000616074 SVEP1Q4LDE5 3571 aa18.21■□□□□ 0.51
TRAPPC3-208ENST00000616074 CFAP73A6NFT4 308 aa18.2■□□□□ 0.5
TRAPPC3-208ENST00000616074 H7C417 338 aa18.2■□□□□ 0.5
TRAPPC3-208ENST00000616074 SDHDO14521 159 aa18.2■□□□□ 0.5
TRAPPC3-208ENST00000616074 GSNP06396 782 aa18.2■□□□□ 0.5
TRAPPC3-208ENST00000616074 PGRP06401 933 aa18.2■□□□□ 0.5
TRAPPC3-208ENST00000616074 IL7RP16871 459 aa18.2■□□□□ 0.5
TRAPPC3-208ENST00000616074 DSCR9P59020 149 aa18.2■□□□□ 0.5
TRAPPC3-208ENST00000616074 STX3Q13277 289 aa18.2■□□□□ 0.5
TRAPPC3-208ENST00000616074 TMEM249Q2WGJ8 235 aa18.2■□□□□ 0.5
TRAPPC3-208ENST00000616074 C6orf52Q5T4I8 152 aa18.2■□□□□ 0.5
TRAPPC3-208ENST00000616074 PODNL1Q6PEZ8 512 aa18.2■□□□□ 0.5
TRAPPC3-208ENST00000616074 PAQR6Q6TCH4 344 aa18.2■□□□□ 0.5
TRAPPC3-208ENST00000616074 ZNF621Q6ZSS3 439 aa18.2■□□□□ 0.5
TRAPPC3-208ENST00000616074 MTHFD2LQ9H903 347 aaPredicted RBP18.2■□□□□ 0.5
TRAPPC3-208ENST00000616074 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.2■□□□□ 0.5
TRAPPC3-208ENST00000616074 AMDHD2Q9Y303 409 aa18.2■□□□□ 0.5
TRAPPC3-208ENST00000616074 ATP23Q9Y6H3 246 aa18.2■□□□□ 0.5
TRAPPC3-208ENST00000616074 V9GYY5 206 aaPredicted RBP18.2■□□□□ 0.5
TRAPPC3-208ENST00000616074 ELOA3DA6NLF2 546 aaPredicted RBP18.19■□□□□ 0.5
TRAPPC3-208ENST00000616074 DBIP07108 87 aaKnown RBP18.19■□□□□ 0.5
TRAPPC3-208ENST00000616074 NR2F1P10589 423 aa18.19■□□□□ 0.5
TRAPPC3-208ENST00000616074 ANXA11P50995 505 aaKnown RBP18.19■□□□□ 0.5
TRAPPC3-208ENST00000616074 MAP2K6P52564 334 aa18.19■□□□□ 0.5
TRAPPC3-208ENST00000616074 TXNL4AP83876 142 aaKnown RBP18.19■□□□□ 0.5
TRAPPC3-208ENST00000616074 BST1Q10588 318 aa18.19■□□□□ 0.5
TRAPPC3-208ENST00000616074 GNA13Q14344 377 aa18.19■□□□□ 0.5
TRAPPC3-208ENST00000616074 MAPK11Q15759 364 aa18.19■□□□□ 0.5
TRAPPC3-208ENST00000616074 ELOA3BQ3SY89 546 aa18.19■□□□□ 0.5
TRAPPC3-208ENST00000616074 CHRFAM7AQ494W8 412 aa18.19■□□□□ 0.5
TRAPPC3-208ENST00000616074 OTUD3Q5T2D3 398 aaPredicted RBP18.19■□□□□ 0.5
TRAPPC3-208ENST00000616074 ELOA3Q8NG57 546 aa18.19■□□□□ 0.5
TRAPPC3-208ENST00000616074 TMEM45BQ96B21 275 aa18.19■□□□□ 0.5
TRAPPC3-208ENST00000616074 ZBTB9Q96C00 473 aa18.19■□□□□ 0.5
TRAPPC3-208ENST00000616074 OR52E6Q96RD3 313 aa18.19■□□□□ 0.5
TRAPPC3-208ENST00000616074 TNFRSF13CQ96RJ3 184 aa18.19■□□□□ 0.5
TRAPPC3-208ENST00000616074 ADAM19Q9H013 955 aa18.19■□□□□ 0.5
TRAPPC3-208ENST00000616074 MANSC1Q9H8J5 431 aa18.19■□□□□ 0.5
TRAPPC3-208ENST00000616074 RLIMQ9NVW2 624 aa18.19■□□□□ 0.5
TRAPPC3-208ENST00000616074 RNF212BA8MTL3 300 aa18.18■□□□□ 0.5
TRAPPC3-208ENST00000616074 IFNA2P01563 188 aa18.18■□□□□ 0.5
TRAPPC3-208ENST00000616074 UQCRBP14927 111 aa18.18■□□□□ 0.5
TRAPPC3-208ENST00000616074 MPGP29372 298 aa18.18■□□□□ 0.5
TRAPPC3-208ENST00000616074 LOXL1Q08397 574 aaPredicted RBP18.18■□□□□ 0.5
TRAPPC3-208ENST00000616074 CEACAM7Q14002 265 aa18.18■□□□□ 0.5
TRAPPC3-208ENST00000616074 OR7A5Q15622 319 aa18.18■□□□□ 0.5
TRAPPC3-208ENST00000616074 TMEM99Q8N816 258 aa18.18■□□□□ 0.5
TRAPPC3-208ENST00000616074 ZIC4Q8N9L1 334 aa18.18■□□□□ 0.5
TRAPPC3-208ENST00000616074 OR9K2Q8NGE7 335 aa18.18■□□□□ 0.5
TRAPPC3-208ENST00000616074 ZNF385AQ96PM9 386 aaKnown RBP18.18■□□□□ 0.5
TRAPPC3-208ENST00000616074 CENPHQ9H3R5 247 aa18.18■□□□□ 0.5
TRAPPC3-208ENST00000616074 FKRPQ9H9S5 495 aa18.18■□□□□ 0.5
TRAPPC3-208ENST00000616074 KCNK9Q9NPC2 374 aa18.18■□□□□ 0.5
TRAPPC3-208ENST00000616074 GPR45Q9Y5Y3 372 aa18.18■□□□□ 0.5
TRAPPC3-208ENST00000616074 ARFGEF3Q5TH69 2177 aa18.17■□□□□ 0.5
TRAPPC3-208ENST00000616074 LIPT2A6NK58 231 aa18.17■□□□□ 0.5
TRAPPC3-208ENST00000616074 ATP6V1G2-DDX39BF2Z307 99 aa18.17■□□□□ 0.5
TRAPPC3-208ENST00000616074 AKR7A3O95154 331 aa18.17■□□□□ 0.5
TRAPPC3-208ENST00000616074 GPIP06744 558 aa18.17■□□□□ 0.5
TRAPPC3-208ENST00000616074 GKN3PP0CG01 181 aa18.17■□□□□ 0.5
TRAPPC3-208ENST00000616074 SLC25A16P16260 332 aa18.17■□□□□ 0.5
TRAPPC3-208ENST00000616074 TGFBR3Q03167 851 aa18.17■□□□□ 0.5
TRAPPC3-208ENST00000616074 TNFAIP8L3Q5GJ75 292 aa18.17■□□□□ 0.5
TRAPPC3-208ENST00000616074 ZNF836Q6ZNA1 936 aa18.17■□□□□ 0.5
TRAPPC3-208ENST00000616074 SPATA19Q7Z5L4 167 aa18.17■□□□□ 0.5
TRAPPC3-208ENST00000616074 VRK2Q86Y07 508 aa18.17■□□□□ 0.5
TRAPPC3-208ENST00000616074 PEX5LQ8IYB4 626 aa18.17■□□□□ 0.5
TRAPPC3-208ENST00000616074 FAM168AQ92567 244 aa18.17■□□□□ 0.5
TRAPPC3-208ENST00000616074 PAIP2Q9BPZ3 127 aaKnown RBP18.17■□□□□ 0.5
TRAPPC3-208ENST00000616074 WDR55Q9H6Y2 383 aaPredicted RBP18.17■□□□□ 0.5
TRAPPC3-208ENST00000616074 SLC6A13Q9NSD5 602 aa18.17■□□□□ 0.5
TRAPPC3-208ENST00000616074 CDHR4A6H8M9 788 aa18.16■□□□□ 0.5
TRAPPC3-208ENST00000616074 AQP7P3A6NL99 342 aa18.16■□□□□ 0.5
TRAPPC3-208ENST00000616074 CDH2P19022 906 aaPredicted RBP18.16■□□□□ 0.5
TRAPPC3-208ENST00000616074 CXCR1P25024 350 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms