RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 A4GALTQ9NPC4 353 aa16.23■□□□□ 0.19
HMGXB3-206ENST00000613459 RCE1Q9Y256 329 aa16.23■□□□□ 0.19
HMGXB3-206ENST00000613459 A3GALT2U3KPV4 340 aa16.23■□□□□ 0.19
HMGXB3-206ENST00000613459 NAV1Q8NEY1 1877 aa16.23■□□□□ 0.19
HMGXB3-206ENST00000613459 RPS10-NUDT3A0A1W2PQS6 291 aa16.23■□□□□ 0.19
HMGXB3-206ENST00000613459 OR7A17O14581 309 aa16.23■□□□□ 0.19
HMGXB3-206ENST00000613459 SCG5P05408 212 aa16.23■□□□□ 0.19
HMGXB3-206ENST00000613459 GABRR1P24046 479 aa16.23■□□□□ 0.19
HMGXB3-206ENST00000613459 RPS10P46783 165 aaKnown RBP16.23■□□□□ 0.19
HMGXB3-206ENST00000613459 CTSCP53634 463 aa16.23■□□□□ 0.19
HMGXB3-206ENST00000613459 CLDN6P56747 220 aa16.23■□□□□ 0.19
HMGXB3-206ENST00000613459 OPCMLQ14982 345 aa16.23■□□□□ 0.19
HMGXB3-206ENST00000613459 OR5H6Q8NGV6 325 aa16.23■□□□□ 0.19
HMGXB3-206ENST00000613459 MCOLN1Q9GZU1 580 aa16.23■□□□□ 0.19
HMGXB3-206ENST00000613459 NRIP3Q9NQ35 241 aa16.23■□□□□ 0.19
HMGXB3-206ENST00000613459 OLAHQ9NV23 265 aa16.23■□□□□ 0.19
HMGXB3-206ENST00000613459 OR52A4PA6NMU1 304 aa16.23■□□□□ 0.19
HMGXB3-206ENST00000613459 SURF4O15260 269 aa16.23■□□□□ 0.19
HMGXB3-206ENST00000613459 OLFM2O95897 454 aa16.23■□□□□ 0.19
HMGXB3-206ENST00000613459 PLA2G7Q13093 441 aa16.23■□□□□ 0.19
HMGXB3-206ENST00000613459 CMIPQ8IY22 773 aa16.23■□□□□ 0.19
HMGXB3-206ENST00000613459 MMP21Q8N119 569 aa16.23■□□□□ 0.19
HMGXB3-206ENST00000613459 EID2Q8N6I1 236 aa16.23■□□□□ 0.19
HMGXB3-206ENST00000613459 BBS1Q8NFJ9 593 aa16.23■□□□□ 0.19
HMGXB3-206ENST00000613459 SLC39A13Q96H72 371 aa16.23■□□□□ 0.19
HMGXB3-206ENST00000613459 SLC41A2Q96JW4 573 aa16.23■□□□□ 0.19
HMGXB3-206ENST00000613459 SMIM3Q9BZL3 60 aa16.23■□□□□ 0.19
HMGXB3-206ENST00000613459 GCM1Q9NP62 436 aa16.23■□□□□ 0.19
HMGXB3-206ENST00000613459 C1GALT1Q9NS00 363 aa16.23■□□□□ 0.19
HMGXB3-206ENST00000613459 ZNF264O43296 627 aa16.23■□□□□ 0.19
HMGXB3-206ENST00000613459 CEBPBP17676 345 aa16.23■□□□□ 0.19
HMGXB3-206ENST00000613459 ILKQ13418 452 aa16.23■□□□□ 0.19
HMGXB3-206ENST00000613459 NXNL2Q5VZ03 156 aa16.23■□□□□ 0.19
HMGXB3-206ENST00000613459 VRK2Q86Y07 508 aa16.23■□□□□ 0.19
HMGXB3-206ENST00000613459 SGK3Q96BR1 496 aa16.23■□□□□ 0.19
HMGXB3-206ENST00000613459 EMC7Q9NPA0 242 aa16.23■□□□□ 0.19
HMGXB3-206ENST00000613459 DIMT1Q9UNQ2 313 aaKnown RBP16.23■□□□□ 0.19
HMGXB3-206ENST00000613459 VDAC3Q9Y277 283 aa16.23■□□□□ 0.19
HMGXB3-206ENST00000613459 SLC9B1P1A6NJY1 282 aa16.22■□□□□ 0.19
HMGXB3-206ENST00000613459 C17orf112F2Z3M2 114 aa16.22■□□□□ 0.19
HMGXB3-206ENST00000613459 FRS3O43559 492 aa16.22■□□□□ 0.19
HMGXB3-206ENST00000613459 C1SP09871 688 aa16.22■□□□□ 0.19
HMGXB3-206ENST00000613459 CCNJQ5T5M9 372 aa16.22■□□□□ 0.19
HMGXB3-206ENST00000613459 MAP3K3Q99759 626 aa16.22■□□□□ 0.19
HMGXB3-206ENST00000613459 C1orf123Q9NWV4 160 aa16.22■□□□□ 0.19
HMGXB3-206ENST00000613459 ASIC5Q9NY37 505 aa16.22■□□□□ 0.19
HMGXB3-206ENST00000613459 PSORS1C1Q9UIG5 152 aa16.22■□□□□ 0.19
HMGXB3-206ENST00000613459 PCYT1BQ9Y5K3 369 aaPredicted RBP16.22■□□□□ 0.19
HMGXB3-206ENST00000613459 NUDT21O43809 227 aaKnown RBP16.22■□□□□ 0.19
HMGXB3-206ENST00000613459 ONECUT3O60422 494 aaPredicted RBP16.22■□□□□ 0.19
HMGXB3-206ENST00000613459 GCAP28676 217 aa16.22■□□□□ 0.19
HMGXB3-206ENST00000613459 SLC14A1Q13336 389 aa16.22■□□□□ 0.19
HMGXB3-206ENST00000613459 PKDCCQ504Y2 493 aa16.22■□□□□ 0.19
HMGXB3-206ENST00000613459 EXOSC6Q5RKV6 272 aaKnown RBP16.22■□□□□ 0.19
HMGXB3-206ENST00000613459 CLEC1AQ8NC01 280 aa16.22■□□□□ 0.19
HMGXB3-206ENST00000613459 OR1J2Q8NGS2 313 aa16.22■□□□□ 0.19
HMGXB3-206ENST00000613459 NPRL2Q8WTW4 380 aa16.22■□□□□ 0.19
HMGXB3-206ENST00000613459 GPATCH2Q9NW75 528 aa16.22■□□□□ 0.19
HMGXB3-206ENST00000613459 PTRH2Q9Y3E5 179 aaKnown RBP16.22■□□□□ 0.19
HMGXB3-206ENST00000613459 NRXN3Q9Y4C0 1643 aa16.22■□□□□ 0.19
HMGXB3-206ENST00000613459 KAT6AQ92794 2004 aa16.22■□□□□ 0.19
HMGXB3-206ENST00000613459 NUPL2O15504 423 aaKnown RBP16.22■□□□□ 0.19
HMGXB3-206ENST00000613459 PCSK6P29122 969 aa16.22■□□□□ 0.19
HMGXB3-206ENST00000613459 VASPP50552 380 aaPredicted RBP16.22■□□□□ 0.19
HMGXB3-206ENST00000613459 UBE2KP61086 200 aa16.22■□□□□ 0.19
HMGXB3-206ENST00000613459 ULBP2Q9BZM5 246 aa16.22■□□□□ 0.19
HMGXB3-206ENST00000613459 METTL17Q9H7H0 456 aaPredicted RBP16.22■□□□□ 0.19
HMGXB3-206ENST00000613459 FAM212BQ9NTI7 297 aaPredicted RBP16.22■□□□□ 0.19
HMGXB3-206ENST00000613459 ACAD8Q9UKU7 415 aa16.22■□□□□ 0.19
HMGXB3-206ENST00000613459 KDM3BQ7LBC6 1761 aa16.22■□□□□ 0.19
HMGXB3-206ENST00000613459 TRAV27A0A087WT01 109 aa16.22■□□□□ 0.19
HMGXB3-206ENST00000613459 PLSCR5A0PG75 271 aa16.22■□□□□ 0.19
HMGXB3-206ENST00000613459 FUCA1P04066 466 aa16.22■□□□□ 0.19
HMGXB3-206ENST00000613459 CHRNB4P30926 498 aa16.22■□□□□ 0.19
HMGXB3-206ENST00000613459 REEP5Q00765 189 aa16.22■□□□□ 0.19
HMGXB3-206ENST00000613459 RPE65Q16518 533 aa16.22■□□□□ 0.19
HMGXB3-206ENST00000613459 ZBED3Q96IU2 234 aaPredicted RBP16.22■□□□□ 0.19
HMGXB3-206ENST00000613459 SORBS1Q9BX66 1292 aaKnown RBP16.22■□□□□ 0.19
HMGXB3-206ENST00000613459 TPSD1Q9BZJ3 242 aa16.22■□□□□ 0.19
HMGXB3-206ENST00000613459 CER1O95813 267 aa16.21■□□□□ 0.19
HMGXB3-206ENST00000613459 ALDOCP09972 364 aaKnown RBP16.21■□□□□ 0.19
HMGXB3-206ENST00000613459 HLA-DMAP28067 261 aa16.21■□□□□ 0.19
HMGXB3-206ENST00000613459 HBA1P69905 142 aa16.21■□□□□ 0.19
HMGXB3-206ENST00000613459 SLC5A12Q1EHB4 618 aa16.21■□□□□ 0.19
HMGXB3-206ENST00000613459 NLGN4XQ8N0W4 816 aa16.21■□□□□ 0.19
HMGXB3-206ENST00000613459 ZFP82Q8N141 532 aa16.21■□□□□ 0.19
HMGXB3-206ENST00000613459 LMAN1LQ9HAT1 526 aa16.21■□□□□ 0.19
HMGXB3-206ENST00000613459 AIPO00170 330 aa16.21■□□□□ 0.19
HMGXB3-206ENST00000613459 RAD1O60671 282 aa16.21■□□□□ 0.19
HMGXB3-206ENST00000613459 UBL3O95164 117 aa16.21■□□□□ 0.19
HMGXB3-206ENST00000613459 AIFM1O95831 613 aa16.21■□□□□ 0.19
HMGXB3-206ENST00000613459 EEF1A1P68104 462 aaKnown RBP16.21■□□□□ 0.19
HMGXB3-206ENST00000613459 LCN10Q6JVE6 187 aa16.21■□□□□ 0.19
HMGXB3-206ENST00000613459 CMSS1Q9BQ75 279 aaKnown RBP16.21■□□□□ 0.19
HMGXB3-206ENST00000613459 NAA50Q9GZZ1 169 aaKnown RBP16.21■□□□□ 0.19
HMGXB3-206ENST00000613459 EHFQ9NZC4 300 aa16.21■□□□□ 0.19
HMGXB3-206ENST00000613459 HS3ST2Q9Y278 367 aa16.21■□□□□ 0.19
HMGXB3-206ENST00000613459 PLEKHM1Q9Y4G2 1056 aa16.21■□□□□ 0.19
HMGXB3-206ENST00000613459 CCDC163A0A0D9SF12 145 aa16.21■□□□□ 0.19
HMGXB3-206ENST00000613459 TMEM82A0PJX8 343 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms