RNA–Protein interactions for RNA: ENST00000608720.5

CTCFL-219, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,241 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-219ENST00000608720 BRD7Q9NPI1 651 aa13.51□□□□□ -0.25
CTCFL-219ENST00000608720 SCP2D1Q9UJQ7 156 aa13.51□□□□□ -0.25
CTCFL-219ENST00000608720 SERTAD3Q9UJW9 196 aa13.51□□□□□ -0.25
CTCFL-219ENST00000608720 FBXL4Q9UKA2 621 aa13.51□□□□□ -0.25
CTCFL-219ENST00000608720 MRPS7Q9Y2R9 242 aaKnown RBP13.51□□□□□ -0.25
CTCFL-219ENST00000608720 CTDSPLO15194 276 aa13.5□□□□□ -0.25
CTCFL-219ENST00000608720 GPR75O95800 540 aa13.5□□□□□ -0.25
CTCFL-219ENST00000608720 CD1AP06126 327 aa13.5□□□□□ -0.25
CTCFL-219ENST00000608720 IFI6P09912 130 aa13.5□□□□□ -0.25
CTCFL-219ENST00000608720 H2AFB2P0C5Z0 115 aa13.5□□□□□ -0.25
CTCFL-219ENST00000608720 OR2T7P0C7T2 308 aa13.5□□□□□ -0.25
CTCFL-219ENST00000608720 UGT2B7P16662 529 aa13.5□□□□□ -0.25
CTCFL-219ENST00000608720 MAT2AP31153 395 aaKnown RBP13.5□□□□□ -0.25
CTCFL-219ENST00000608720 MAP3K8P41279 467 aa13.5□□□□□ -0.25
CTCFL-219ENST00000608720 ZNF81P51508 661 aa13.5□□□□□ -0.25
CTCFL-219ENST00000608720 DGCR2P98153 550 aa13.5□□□□□ -0.25
CTCFL-219ENST00000608720 BTN2A1Q7KYR7 527 aa13.5□□□□□ -0.25
CTCFL-219ENST00000608720 OR13C5Q8NGS8 318 aa13.5□□□□□ -0.25
CTCFL-219ENST00000608720 OR2T27Q8NH04 317 aa13.5□□□□□ -0.25
CTCFL-219ENST00000608720 SMIM19Q96E16 107 aa13.5□□□□□ -0.25
CTCFL-219ENST00000608720 USP36Q9P275 1121 aaKnown RBP13.5□□□□□ -0.25
CTCFL-219ENST00000608720 SPATA2Q9UM82 520 aa13.5□□□□□ -0.25
CTCFL-219ENST00000608720 NPTNQ9Y639 398 aa13.5□□□□□ -0.25
CTCFL-219ENST00000608720 CHD7Q9P2D1 2997 aa13.5□□□□□ -0.25
CTCFL-219ENST00000608720 MYO7AQ13402 2215 aa13.5□□□□□ -0.25
CTCFL-219ENST00000608720 SYNDIG1LA6NDD5 238 aa13.49□□□□□ -0.25
CTCFL-219ENST00000608720 ANKRD61A6NGH8 418 aa13.49□□□□□ -0.25
CTCFL-219ENST00000608720 LDB3O75112 727 aa13.49□□□□□ -0.25
CTCFL-219ENST00000608720 GYPBP06028 91 aa13.49□□□□□ -0.25
CTCFL-219ENST00000608720 UCHL1P09936 223 aa13.49□□□□□ -0.25
CTCFL-219ENST00000608720 GDI2P50395 445 aaKnown RBP13.49□□□□□ -0.25
CTCFL-219ENST00000608720 SNTB2Q13425 540 aaKnown RBP13.49□□□□□ -0.25
CTCFL-219ENST00000608720 CDK5R1Q15078 307 aa13.49□□□□□ -0.25
CTCFL-219ENST00000608720 GSG1Q2KHT4 349 aa13.49□□□□□ -0.25
CTCFL-219ENST00000608720 PRICKLE4Q2TBC4 344 aa13.49□□□□□ -0.25
CTCFL-219ENST00000608720 TP53I3Q53FA7 332 aa13.49□□□□□ -0.25
CTCFL-219ENST00000608720 FIGLAQ6QHK4 219 aa13.49□□□□□ -0.25
CTCFL-219ENST00000608720 LSRQ86X29 649 aaPredicted RBP13.49□□□□□ -0.25
CTCFL-219ENST00000608720 POMGNT2Q8NAT1 580 aa13.49□□□□□ -0.25
CTCFL-219ENST00000608720 OR2T4Q8NH00 348 aa13.49□□□□□ -0.25
CTCFL-219ENST00000608720 MYADMQ96S97 322 aa13.49□□□□□ -0.25
CTCFL-219ENST00000608720 GSDMCQ9BYG8 508 aa13.49□□□□□ -0.25
CTCFL-219ENST00000608720 TRIM2Q9C040 744 aa13.49□□□□□ -0.25
CTCFL-219ENST00000608720 MCCC2Q9HCC0 563 aa13.49□□□□□ -0.25
CTCFL-219ENST00000608720 TMEM74BQ9NUR3 256 aa13.49□□□□□ -0.25
CTCFL-219ENST00000608720 EMC3Q9P0I2 261 aa13.49□□□□□ -0.25
CTCFL-219ENST00000608720 CLEC4AQ9UMR7 237 aa13.49□□□□□ -0.25
CTCFL-219ENST00000608720 TBC1D3DA0A087WVF3 549 aa13.49□□□□□ -0.25
CTCFL-219ENST00000608720 TBC1D3IA0A087WXS9 549 aa13.49□□□□□ -0.25
CTCFL-219ENST00000608720 A0A1B0GWA3 101 aa13.49□□□□□ -0.25
CTCFL-219ENST00000608720 GXYLT2A0PJZ3 443 aa13.49□□□□□ -0.25
CTCFL-219ENST00000608720 TRABD2BA6NFA1 517 aa13.49□□□□□ -0.25
CTCFL-219ENST00000608720 TBC1D3LB9A6J9 549 aa13.49□□□□□ -0.25
CTCFL-219ENST00000608720 SLC31A1O15431 190 aa13.49□□□□□ -0.25
CTCFL-219ENST00000608720 FGF17O60258 216 aa13.49□□□□□ -0.25
CTCFL-219ENST00000608720 HOXC4P09017 264 aaPredicted RBP13.49□□□□□ -0.25
CTCFL-219ENST00000608720 TBC1D3HP0C7X1 549 aa13.49□□□□□ -0.25
CTCFL-219ENST00000608720 SULT1A3P0DMM9 295 aa13.49□□□□□ -0.25
CTCFL-219ENST00000608720 SULT1A4P0DMN0 295 aa13.49□□□□□ -0.25
CTCFL-219ENST00000608720 SIRPAP78324 504 aa13.49□□□□□ -0.25
CTCFL-219ENST00000608720 NHLRC3Q5JS37 347 aa13.49□□□□□ -0.25
CTCFL-219ENST00000608720 FCRL6Q6DN72 434 aa13.49□□□□□ -0.25
CTCFL-219ENST00000608720 TBC1D3CQ6IPX1 549 aa13.49□□□□□ -0.25
CTCFL-219ENST00000608720 RPL22L1Q6P5R6 122 aaKnown RBP13.49□□□□□ -0.25
CTCFL-219ENST00000608720 FGD2Q7Z6J4 655 aa13.49□□□□□ -0.25
CTCFL-219ENST00000608720 YAF2Q8IY57 180 aa13.49□□□□□ -0.25
CTCFL-219ENST00000608720 TBC1D3Q8IZP1 549 aaPredicted RBP13.49□□□□□ -0.25
CTCFL-219ENST00000608720 OR6M1Q8NGM8 313 aa13.49□□□□□ -0.25
CTCFL-219ENST00000608720 OR56B4Q8NH76 319 aa13.49□□□□□ -0.25
CTCFL-219ENST00000608720 PHYHIPQ92561 330 aa13.49□□□□□ -0.25
CTCFL-219ENST00000608720 CNOT9Q92600 299 aaKnown RBP13.49□□□□□ -0.25
CTCFL-219ENST00000608720 FAM131CQ96AQ9 280 aa13.49□□□□□ -0.25
CTCFL-219ENST00000608720 PELI1Q96FA3 418 aa13.49□□□□□ -0.25
CTCFL-219ENST00000608720 ERMAPQ96PL5 475 aaPredicted RBP13.49□□□□□ -0.25
CTCFL-219ENST00000608720 CNN2Q99439 309 aaKnown RBP13.49□□□□□ -0.25
CTCFL-219ENST00000608720 ZNF426Q9BUY5 554 aa13.49□□□□□ -0.25
CTCFL-219ENST00000608720 IL21RQ9HBE5 538 aa13.49□□□□□ -0.25
CTCFL-219ENST00000608720 SDHAF2Q9NX18 166 aa13.49□□□□□ -0.25
CTCFL-219ENST00000608720 FLRT3Q9NZU0 649 aa13.49□□□□□ -0.25
CTCFL-219ENST00000608720 PILRAQ9UKJ1 303 aa13.49□□□□□ -0.25
CTCFL-219ENST00000608720 PRELID3BQ9Y3B1 194 aa13.49□□□□□ -0.25
CTCFL-219ENST00000608720 HRH3Q9Y5N1 445 aa13.49□□□□□ -0.25
CTCFL-219ENST00000608720 LOC105369274A0A096LPK9 316 aa13.48□□□□□ -0.25
CTCFL-219ENST00000608720 ZNF860A6NHJ4 632 aa13.48□□□□□ -0.25
CTCFL-219ENST00000608720 TGM6O95932 706 aa13.48□□□□□ -0.25
CTCFL-219ENST00000608720 CXCL3P19876 107 aa13.48□□□□□ -0.25
CTCFL-219ENST00000608720 DNASE1P24855 282 aa13.48□□□□□ -0.25
CTCFL-219ENST00000608720 AK4P27144 223 aaPredicted RBP13.48□□□□□ -0.25
CTCFL-219ENST00000608720 PLAURQ03405 335 aa13.48□□□□□ -0.25
CTCFL-219ENST00000608720 MGAT2Q10469 447 aa13.48□□□□□ -0.25
CTCFL-219ENST00000608720 KLF9Q13886 244 aaPredicted RBP13.48□□□□□ -0.25
CTCFL-219ENST00000608720 TUSC1Q2TAM9 212 aa13.48□□□□□ -0.25
CTCFL-219ENST00000608720 RNASE12Q5GAN4 147 aaKnown RBP13.48□□□□□ -0.25
CTCFL-219ENST00000608720 SLITRK4Q8IW52 837 aa13.48□□□□□ -0.25
CTCFL-219ENST00000608720 OR4N4Q8N0Y3 316 aa13.48□□□□□ -0.25
CTCFL-219ENST00000608720 FAM98AQ8NCA5 519 aaKnown RBP13.48□□□□□ -0.25
CTCFL-219ENST00000608720 OR4D9Q8NGE8 314 aa13.48□□□□□ -0.25
CTCFL-219ENST00000608720 OR52E2Q8NGJ4 325 aa13.48□□□□□ -0.25
CTCFL-219ENST00000608720 RPLP0P6Q8NHW5 317 aa13.48□□□□□ -0.25
CTCFL-219ENST00000608720 MRPL48Q96GC5 212 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms