RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 NFKBIDQ8NI38 313 aa17.05■□□□□ 0.32
SGMS1-208ENST00000608287 ABHD3Q8WU67 409 aa17.05■□□□□ 0.32
SGMS1-208ENST00000608287 KLHL4Q9C0H6 718 aa17.05■□□□□ 0.32
SGMS1-208ENST00000608287 IKZF5Q9H5V7 419 aa17.05■□□□□ 0.32
SGMS1-208ENST00000608287 ARMC7Q9H6L4 198 aa17.05■□□□□ 0.32
SGMS1-208ENST00000608287 CHRNA9Q9UGM1 479 aa17.05■□□□□ 0.32
SGMS1-208ENST00000608287 IFT52Q9Y366 437 aa17.05■□□□□ 0.32
SGMS1-208ENST00000608287 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.04■□□□□ 0.328e-12■■■■■ 44.3
SGMS1-208ENST00000608287 CUBNO60494 3623 aa17.04■□□□□ 0.32
SGMS1-208ENST00000608287 ATP8B1O43520 1251 aa17.04■□□□□ 0.32
SGMS1-208ENST00000608287 PRKD3O94806 890 aa17.04■□□□□ 0.32
SGMS1-208ENST00000608287 PGM3O95394 542 aa17.04■□□□□ 0.32
SGMS1-208ENST00000608287 FESP07332 822 aa17.04■□□□□ 0.32
SGMS1-208ENST00000608287 ARAFP10398 606 aa17.04■□□□□ 0.32
SGMS1-208ENST00000608287 ENPP1P22413 925 aa17.04■□□□□ 0.32
SGMS1-208ENST00000608287 AGTR1P30556 359 aa17.04■□□□□ 0.32
SGMS1-208ENST00000608287 HTR3AP46098 478 aa17.04■□□□□ 0.32
SGMS1-208ENST00000608287 EXOC3L2Q2M3D2 409 aa17.04■□□□□ 0.32
SGMS1-208ENST00000608287 ZNF311Q5JNZ3 666 aa17.04■□□□□ 0.32
SGMS1-208ENST00000608287 C6orf52Q5T4I8 152 aa17.04■□□□□ 0.32
SGMS1-208ENST00000608287 RNF220Q5VTB9 566 aa17.04■□□□□ 0.32
SGMS1-208ENST00000608287 PRAMEF8Q5VWM4 474 aa17.04■□□□□ 0.32
SGMS1-208ENST00000608287 PRAMEF7Q5VXH5 474 aa17.04■□□□□ 0.32
SGMS1-208ENST00000608287 ADGRG3Q86Y34 549 aa17.04■□□□□ 0.32
SGMS1-208ENST00000608287 CLIP4Q8N3C7 705 aa17.04■□□□□ 0.32
SGMS1-208ENST00000608287 TSPEARQ8WU66 669 aa17.04■□□□□ 0.32
SGMS1-208ENST00000608287 FBXW5Q969U6 566 aa17.04■□□□□ 0.32
SGMS1-208ENST00000608287 DNAJA3Q96EY1 480 aa17.04■□□□□ 0.32
SGMS1-208ENST00000608287 CPPED1Q9BRF8 314 aaPredicted RBP17.04■□□□□ 0.32
SGMS1-208ENST00000608287 TMEM204Q9BSN7 226 aa17.04■□□□□ 0.32
SGMS1-208ENST00000608287 SPATA9Q9BWV2 254 aa17.04■□□□□ 0.32
SGMS1-208ENST00000608287 SLCO5A1Q9H2Y9 848 aa17.04■□□□□ 0.32
SGMS1-208ENST00000608287 CCDC134Q9H6E4 229 aa17.04■□□□□ 0.32
SGMS1-208ENST00000608287 C12orf49Q9H741 205 aa17.04■□□□□ 0.32
SGMS1-208ENST00000608287 BCL2L10Q9HD36 194 aa17.04■□□□□ 0.32
SGMS1-208ENST00000608287 PLSCR4Q9NRQ2 329 aa17.04■□□□□ 0.32
SGMS1-208ENST00000608287 GMEB1Q9Y692 573 aa17.04■□□□□ 0.32
SGMS1-208ENST00000608287 TMED7-TICAM2A0A0A6YYA0 188 aa17.03■□□□□ 0.32
SGMS1-208ENST00000608287 OVOL3O00110 214 aa17.03■□□□□ 0.32
SGMS1-208ENST00000608287 SULT2B1O00204 365 aa17.03■□□□□ 0.32
SGMS1-208ENST00000608287 FAAHO00519 579 aa17.03■□□□□ 0.32
SGMS1-208ENST00000608287 KLF4O43474 513 aa17.03■□□□□ 0.32
SGMS1-208ENST00000608287 TACR3P29371 465 aa17.03■□□□□ 0.32
SGMS1-208ENST00000608287 MDH1P40925 334 aaKnown RBP17.03■□□□□ 0.32
SGMS1-208ENST00000608287 SLC1A3P43003 542 aa17.03■□□□□ 0.32
SGMS1-208ENST00000608287 DIO1P49895 249 aa17.03■□□□□ 0.32
SGMS1-208ENST00000608287 POLR2HP52434 150 aaKnown RBP17.03■□□□□ 0.32
SGMS1-208ENST00000608287 CSNK2A1P68400 391 aaPredicted RBP17.03■□□□□ 0.32
SGMS1-208ENST00000608287 CDK6Q00534 326 aa17.03■□□□□ 0.32
SGMS1-208ENST00000608287 NFYCQ13952 458 aa17.03■□□□□ 0.32
SGMS1-208ENST00000608287 ZSWIM7Q19AV6 140 aa17.03■□□□□ 0.32
SGMS1-208ENST00000608287 RUNDC3AQ59EK9 446 aa17.03■□□□□ 0.32
SGMS1-208ENST00000608287 TMEM201Q5SNT2 666 aa17.03■□□□□ 0.32
SGMS1-208ENST00000608287 REEP3Q6NUK4 255 aa17.03■□□□□ 0.32
SGMS1-208ENST00000608287 ADAM5Q6NVV9 412 aa17.03■□□□□ 0.32
SGMS1-208ENST00000608287 TMPPEQ6ZT21 453 aa17.03■□□□□ 0.32
SGMS1-208ENST00000608287 RETREG3Q86VR2 466 aa17.03■□□□□ 0.32
SGMS1-208ENST00000608287 SLC43A2Q8N370 569 aa17.03■□□□□ 0.32
SGMS1-208ENST00000608287 DPP10Q8N608 796 aa17.03■□□□□ 0.32
SGMS1-208ENST00000608287 AKAP1Q92667 903 aaKnown RBP eCLIP17.03■□□□□ 0.32
SGMS1-208ENST00000608287 PLPPR2Q96GM1 343 aa17.03■□□□□ 0.32
SGMS1-208ENST00000608287 HS6ST2Q96MM7 605 aa17.03■□□□□ 0.32
SGMS1-208ENST00000608287 OR11A1Q9GZK7 315 aa17.03■□□□□ 0.32
SGMS1-208ENST00000608287 OR10A4Q9H209 315 aa17.03■□□□□ 0.32
SGMS1-208ENST00000608287 OSGIN1Q9UJX0 560 aa17.03■□□□□ 0.32
SGMS1-208ENST00000608287 TMED7Q9Y3B3 224 aa17.03■□□□□ 0.32
SGMS1-208ENST00000608287 WIPF1O43516 503 aa17.02■□□□□ 0.32
SGMS1-208ENST00000608287 ETS2P15036 469 aa17.02■□□□□ 0.32
SGMS1-208ENST00000608287 GPX2P18283 190 aa17.02■□□□□ 0.32
SGMS1-208ENST00000608287 FKBP2P26885 142 aaKnown RBP17.02■□□□□ 0.32
SGMS1-208ENST00000608287 COPZ1P61923 177 aa17.02■□□□□ 0.32
SGMS1-208ENST00000608287 RUNX1T1Q06455 604 aa17.02■□□□□ 0.32
SGMS1-208ENST00000608287 SCARB2Q14108 478 aa17.02■□□□□ 0.32
SGMS1-208ENST00000608287 TUSC5Q8IXB3 177 aa17.02■□□□□ 0.32
SGMS1-208ENST00000608287 CADM2Q8N3J6 435 aa17.02■□□□□ 0.32
SGMS1-208ENST00000608287 ARL5BQ96KC2 179 aa17.02■□□□□ 0.32
SGMS1-208ENST00000608287 ANKRD27Q96NW4 1050 aa17.02■□□□□ 0.32
SGMS1-208ENST00000608287 KCNK17Q96T54 332 aa17.02■□□□□ 0.32
SGMS1-208ENST00000608287 CGREF1Q99674 301 aa17.02■□□□□ 0.32
SGMS1-208ENST00000608287 RHNO1Q9BSD3 238 aa17.02■□□□□ 0.32
SGMS1-208ENST00000608287 SHARPINQ9H0F6 387 aa17.02■□□□□ 0.32
SGMS1-208ENST00000608287 TMEM38AQ9H6F2 299 aa17.02■□□□□ 0.32
SGMS1-208ENST00000608287 MRGBPQ9NV56 204 aa17.02■□□□□ 0.32
SGMS1-208ENST00000608287 KLHL13Q9P2N7 655 aa17.02■□□□□ 0.32
SGMS1-208ENST00000608287 CHST2Q9Y4C5 530 aa17.02■□□□□ 0.32
SGMS1-208ENST00000608287 SMAD9O15198 467 aaKnown RBP17.01■□□□□ 0.31
SGMS1-208ENST00000608287 PRG2P13727 222 aa17.01■□□□□ 0.31
SGMS1-208ENST00000608287 SLC6A2P23975 617 aa17.01■□□□□ 0.31
SGMS1-208ENST00000608287 ACAA2P42765 397 aaKnown RBP17.01■□□□□ 0.31
SGMS1-208ENST00000608287 CLK1P49759 484 aaKnown RBP17.01■□□□□ 0.31
SGMS1-208ENST00000608287 MTPNP58546 118 aa17.01■□□□□ 0.31
SGMS1-208ENST00000608287 STK32CQ86UX6 486 aa17.01■□□□□ 0.31
SGMS1-208ENST00000608287 LSRQ86X29 649 aaPredicted RBP17.01■□□□□ 0.31
SGMS1-208ENST00000608287 KRT73Q86Y46 540 aa17.01■□□□□ 0.31
SGMS1-208ENST00000608287 DDIT4LQ96D03 193 aa17.01■□□□□ 0.31
SGMS1-208ENST00000608287 ZHX1-C8orf76Q96EF9 292 aa17.01■□□□□ 0.31
SGMS1-208ENST00000608287 TACO1Q9BSH4 297 aaKnown RBP17.01■□□□□ 0.31
SGMS1-208ENST00000608287 GP6Q9HCN6 339 aa17.01■□□□□ 0.31
SGMS1-208ENST00000608287 NGBQ9NPG2 151 aa17.01■□□□□ 0.31
SGMS1-208ENST00000608287 KLHL9Q9P2J3 617 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms