RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 HGFACQ04756 655 aa13.28□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 C1orf229Q6ZS94 237 aaPredicted RBP13.28□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 TUBA1AQ71U36 451 aa13.28□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 C1QL2Q7Z5L3 287 aa13.28□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 CARM1Q86X55 608 aa13.28□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 RDH5Q92781 318 aa13.28□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 ZNF317Q96PQ6 595 aaPredicted RBP13.28□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 SDF2Q99470 211 aa13.28□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 MS4A5Q9H3V2 200 aa13.28□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 BAIAP2L1Q9UHR4 511 aa13.28□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 PCDHGB4Q9UN71 923 aa13.28□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 CMAHPQ9Y471 501 aa13.28□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 PTGDR2Q9Y5Y4 395 aa13.28□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 TRRAPQ9Y4A5 3859 aa13.27□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 A0A096LPE4 126 aa13.27□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 A0A0G2JMP0 313 aa13.27□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 A0A0X1KG70 313 aa13.27□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 A0A1W2PPZ6 126 aa13.27□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 NPIPB8E9PQR5 432 aa13.27□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 M0R233 179 aa13.27□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 PIP5K1BO14986 540 aa13.27□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 PPIHO43447 177 aaKnown RBP13.27□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 SYNGR3O43761 229 aa13.27□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 STX11O75558 287 aa13.27□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 AVPP01185 164 aa13.27□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 IGLV1-44P01699 117 aa13.27□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 SNRPAP09012 282 aaKnown RBP13.27□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 PRPH2P23942 346 aa13.27□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 ASMTP46597 345 aa13.27□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 TMEM33P57088 247 aa13.27□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 RPL38P63173 70 aaKnown RBP13.27□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 DAG1Q14118 895 aa13.27□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 ZNF141Q15928 474 aa13.27□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 REP15Q6BDI9 236 aa13.27□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 GPAT4Q86UL3 456 aa13.27□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 ADGRG3Q86Y34 549 aa13.27□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 OR4M2Q8NGB6 313 aa13.27□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 OR5D16Q8NGK9 328 aa13.27□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 PMM1Q92871 262 aa13.27□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 ZNF385AQ96PM9 386 aaKnown RBP13.27□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 OR7D2Q96RA2 312 aa13.27□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 UNKLQ9H9P5 680 aaKnown RBP13.27□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 SEC61A2Q9H9S3 476 aa13.27□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 REV1Q9UBZ9 1251 aa13.27□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 ZNF180Q9UJW8 692 aa13.27□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 CORINQ9Y5Q5 1042 aa13.27□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 WNT9BO14905 357 aa13.26□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 UGT2B17O75795 530 aa13.26□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 URI1O94763 535 aaPredicted RBP13.26□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 AK1P00568 194 aa13.26□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 IGKV3-15P01624 115 aa13.26□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 UROSP10746 265 aa13.26□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 ADRA2CP18825 462 aa13.26□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 TCN1P20061 433 aaPredicted RBP13.26□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 COL8A2P25067 703 aa13.26□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 ZFP36P26651 326 aaKnown RBP13.26□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 HPCAL1P37235 193 aa13.26□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 HTR3AP46098 478 aa13.26□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 NAA20P61599 178 aa13.26□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 POU3F1Q03052 451 aaPredicted RBP13.26□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 SNTB2Q13425 540 aaKnown RBP13.26□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 ELFN2Q5R3F8 820 aa13.26□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 OTUD3Q5T2D3 398 aaPredicted RBP13.26□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 HIST2H2BDQ6DRA6 164 aa13.26□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 KRT80Q6KB66 452 aa13.26□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 ACSM5Q6NUN0 579 aa13.26□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 PAQR6Q6TCH4 344 aa13.26□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 LCA5Q86VQ0 697 aa13.26□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 FAM169BQ8N8A8 192 aa13.26□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 OR9K2Q8NGE7 335 aa13.26□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 MAGEE2Q8TD90 523 aaPredicted RBP13.26□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 C22orf15Q8WYQ4 148 aa13.26□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 BCL2L2Q92843 193 aaPredicted RBP13.26□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 MOAP1Q96BY2 351 aa13.26□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 CCDC126Q96EE4 140 aa13.26□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 ALKBH3Q96Q83 286 aaPredicted RBP13.26□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 SF3B5Q9BWJ5 86 aaKnown RBP13.26□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 RACGAP1Q9H0H5 632 aa13.26□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 GPATCH2Q9NW75 528 aa13.26□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 OXSMQ9NWU1 459 aa13.26□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 MED29Q9NX70 200 aa13.26□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 KCNE5Q9UJ90 142 aa13.26□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 MKLN1Q9UL63 735 aa13.26□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 SLC35A3Q9Y2D2 325 aa13.26□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 CCL27Q9Y4X3 112 aa13.26□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 IGHV2OR16-5A0A0B4J2B6 119 aa13.25□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 DUXAA6NLW8 204 aa13.25□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 MPZL1O95297 269 aa13.25□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 IGFBP1P08833 259 aaPredicted RBP13.25□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 CELA3BP08861 270 aa13.25□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 IMPDH2P12268 514 aa13.25□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 HOXB1P14653 301 aaPredicted RBP13.25□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 RPL3P39023 403 aaKnown RBP13.25□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 NPRL3Q12980 569 aa13.25□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 LSM12Q3MHD2 195 aaKnown RBP13.25□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 CFAP157Q5JU67 520 aa13.25□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 SFXN5Q8TD22 340 aa13.25□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 OR5P2Q8WZ92 322 aa13.25□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 FUT8Q9BYC5 575 aa13.25□□□□□ -0.29
NEDD8-MDP1-204ENST00000605847 TMPRSS13Q9BYE2 586 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms