RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 ADIPOQQ15848 244 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 NDUFA9Q16795 377 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 PLEKHN1Q494U1 663 aaPredicted RBP8.22□□□□□ -1.09
COMMD3-215ENST00000602574 UBXN11Q5T124 520 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 CPZQ66K79 652 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 THSD4Q6ZMP0 1018 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 DET1Q7L5Y6 550 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 TMEM179BQ7Z7N9 219 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 VSIG10LQ86VR7 867 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 PHACTR4Q8IZ21 702 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 HS3ST5Q8IZT8 346 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 OR6V1Q8N148 313 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 FBXL13Q8NEE6 735 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 SPPL2AQ8TCT8 520 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 ARRDC3Q96B67 414 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 COA7Q96BR5 231 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 YPEL4Q96NS1 127 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 OR8B4Q96RC9 309 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 FCRL5Q96RD9 977 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 FIZ1Q96SL8 496 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 PCYT2Q99447 389 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 MRPL57Q9BQC6 102 aaKnown RBP8.22□□□□□ -1.09
COMMD3-215ENST00000602574 FAAP24Q9BTP7 215 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 TBL1XR1Q9BZK7 514 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 XYLT2Q9H1B5 865 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 PNO1Q9NRX1 252 aaKnown RBP8.22□□□□□ -1.09
COMMD3-215ENST00000602574 CNTN6Q9UQ52 1028 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 LSM2Q9Y333 95 aaKnown RBP8.22□□□□□ -1.09
COMMD3-215ENST00000602574 FAM96BQ9Y3D0 163 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 TRAV39A0A0B4J263 110 aa8.21□□□□□ -1.1
COMMD3-215ENST00000602574 CCL25O15444 150 aa8.21□□□□□ -1.1
COMMD3-215ENST00000602574 NARSO43776 548 aaKnown RBP8.21□□□□□ -1.1
COMMD3-215ENST00000602574 TPST2O60704 377 aa8.21□□□□□ -1.1
COMMD3-215ENST00000602574 ACTL6AO96019 429 aa8.21□□□□□ -1.1
COMMD3-215ENST00000602574 IL5P05113 134 aa8.21□□□□□ -1.1
COMMD3-215ENST00000602574 MTHFD2P13995 350 aa8.21□□□□□ -1.1
COMMD3-215ENST00000602574 FPR1P21462 350 aa8.21□□□□□ -1.1
COMMD3-215ENST00000602574 IDSP22304 550 aa8.21□□□□□ -1.1
COMMD3-215ENST00000602574 TUBG1P23258 451 aa8.21□□□□□ -1.1
COMMD3-215ENST00000602574 RBMS1P29558 406 aaKnown RBP8.21□□□□□ -1.1
COMMD3-215ENST00000602574 JAK3P52333 1124 aa8.21□□□□□ -1.1
COMMD3-215ENST00000602574 NRG3P56975 720 aa8.21□□□□□ -1.1
COMMD3-215ENST00000602574 MLLT11Q13015 90 aaPredicted RBP8.21□□□□□ -1.1
COMMD3-215ENST00000602574 ABRAXAS2Q15018 415 aa8.21□□□□□ -1.1
COMMD3-215ENST00000602574 RHEBQ15382 184 aa8.21□□□□□ -1.1
COMMD3-215ENST00000602574 CARD16Q5EG05 197 aa8.21□□□□□ -1.1
COMMD3-215ENST00000602574 C1orf194Q5T5A4 169 aa8.21□□□□□ -1.1
COMMD3-215ENST00000602574 KIRREL2Q6UWL6 708 aa8.21□□□□□ -1.1
COMMD3-215ENST00000602574 UNQ9370/PRO34162Q6UXP9 181 aa8.21□□□□□ -1.1
COMMD3-215ENST00000602574 HEPN1Q6WQI6 88 aa8.21□□□□□ -1.1
COMMD3-215ENST00000602574 FBXW12Q6X9E4 464 aa8.21□□□□□ -1.1
COMMD3-215ENST00000602574 B3GLCTQ6Y288 498 aa8.21□□□□□ -1.1
COMMD3-215ENST00000602574 GAREM2Q75VX8 874 aa8.21□□□□□ -1.1
COMMD3-215ENST00000602574 WDR53Q7Z5U6 358 aaPredicted RBP8.21□□□□□ -1.1
COMMD3-215ENST00000602574 COMMD2Q86X83 199 aa8.21□□□□□ -1.1
COMMD3-215ENST00000602574 MRPL41Q8IXM3 137 aaKnown RBP8.21□□□□□ -1.1
COMMD3-215ENST00000602574 TNS4Q8IZW8 715 aa8.21□□□□□ -1.1
COMMD3-215ENST00000602574 DTWD1Q8N5C7 304 aa8.21□□□□□ -1.1
COMMD3-215ENST00000602574 C11orf42Q8N5U0 333 aa8.21□□□□□ -1.1
COMMD3-215ENST00000602574 MRPL43Q8N983 215 aaKnown RBP8.21□□□□□ -1.1
COMMD3-215ENST00000602574 ZNF610Q8N9Z0 462 aa8.21□□□□□ -1.1
COMMD3-215ENST00000602574 OR51S1Q8NGJ8 323 aa8.21□□□□□ -1.1
COMMD3-215ENST00000602574 CXorf40AQ8TE69 158 aa8.21□□□□□ -1.1
COMMD3-215ENST00000602574 FAM222BQ8WU58 562 aa8.21□□□□□ -1.1
COMMD3-215ENST00000602574 ABHD3Q8WU67 409 aa8.21□□□□□ -1.1
COMMD3-215ENST00000602574 DYNLL2Q96FJ2 89 aa8.21□□□□□ -1.1
COMMD3-215ENST00000602574 PGAM5Q96HS1 289 aa8.21□□□□□ -1.1
COMMD3-215ENST00000602574 KLHDC3Q9BQ90 382 aa8.21□□□□□ -1.1
COMMD3-215ENST00000602574 UTP23Q9BRU9 249 aaKnown RBP8.21□□□□□ -1.1
COMMD3-215ENST00000602574 CACNG6Q9BXT2 260 aa8.21□□□□□ -1.1
COMMD3-215ENST00000602574 CSNK1G1Q9HCP0 422 aa8.21□□□□□ -1.1
COMMD3-215ENST00000602574 SDR39U1Q9NRG7 319 aaPredicted RBP8.21□□□□□ -1.1
COMMD3-215ENST00000602574 TUBG2Q9NRH3 451 aa8.21□□□□□ -1.1
COMMD3-215ENST00000602574 SEMA5BQ9P283 1151 aa8.21□□□□□ -1.1
COMMD3-215ENST00000602574 DOCK5Q9H7D0 1870 aa8.21□□□□□ -1.1
COMMD3-215ENST00000602574 WDR27A2RRH5 827 aa8.2□□□□□ -1.1
COMMD3-215ENST00000602574 PRAMEF27A3QJZ7 478 aa8.2□□□□□ -1.1
COMMD3-215ENST00000602574 C2orf78A6NCI8 922 aa8.2□□□□□ -1.1
COMMD3-215ENST00000602574 PRAMEF25A6NGN4 478 aa8.2□□□□□ -1.1
COMMD3-215ENST00000602574 C3orf70A6NLC5 250 aaPredicted RBP8.2□□□□□ -1.1
COMMD3-215ENST00000602574 SEPT4O43236 478 aa8.2□□□□□ -1.1
COMMD3-215ENST00000602574 CDC40O60508 579 aaKnown RBP eCLIP8.2□□□□□ -1.1
COMMD3-215ENST00000602574 PRAMEF4O60810 478 aa8.2□□□□□ -1.1
COMMD3-215ENST00000602574 RAMP3O60896 148 aa8.2□□□□□ -1.1
COMMD3-215ENST00000602574 EPXP11678 715 aa8.2□□□□□ -1.1
COMMD3-215ENST00000602574 RFX3P48380 749 aa8.2□□□□□ -1.1
COMMD3-215ENST00000602574 DAPP51397 102 aa8.2□□□□□ -1.1
COMMD3-215ENST00000602574 OR4D2P58180 307 aa8.2□□□□□ -1.1
COMMD3-215ENST00000602574 PRR5P85299 388 aa8.2□□□□□ -1.1
COMMD3-215ENST00000602574 SNTB2Q13425 540 aaKnown RBP8.2□□□□□ -1.1
COMMD3-215ENST00000602574 OR5I1Q13606 314 aa8.2□□□□□ -1.1
COMMD3-215ENST00000602574 PRAMEF18Q5VWM3 479 aa8.2□□□□□ -1.1
COMMD3-215ENST00000602574 PRAMEF9Q5VWM5 478 aa8.2□□□□□ -1.1
COMMD3-215ENST00000602574 FAHD1Q6P587 224 aa8.2□□□□□ -1.1
COMMD3-215ENST00000602574 USP17L6PQ6QN14 398 aa8.2□□□□□ -1.1
COMMD3-215ENST00000602574 TMEM270Q6UE05 265 aa8.2□□□□□ -1.1
COMMD3-215ENST00000602574 ABHD12BQ7Z5M8 362 aaPredicted RBP8.2□□□□□ -1.1
COMMD3-215ENST00000602574 RGL4Q8IZJ4 473 aa8.2□□□□□ -1.1
COMMD3-215ENST00000602574 TMEM151AQ8N4L1 468 aa8.2□□□□□ -1.1
COMMD3-215ENST00000602574 MTMR14Q8NCE2 650 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms