RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 TMEM249Q2WGJ8 235 aa15.76■□□□□ 0.11
CHMP2A-208ENST00000601220 TNFAIP8L3Q5GJ75 292 aa15.76■□□□□ 0.11
CHMP2A-208ENST00000601220 COX20Q5RI15 118 aa15.76■□□□□ 0.11
CHMP2A-208ENST00000601220 C6orf52Q5T4I8 152 aa15.76■□□□□ 0.11
CHMP2A-208ENST00000601220 WDR93Q6P2C0 686 aa15.76■□□□□ 0.11
CHMP2A-208ENST00000601220 PODNL1Q6PEZ8 512 aa15.76■□□□□ 0.11
CHMP2A-208ENST00000601220 FBXL14Q8N1E6 418 aa15.76■□□□□ 0.11
CHMP2A-208ENST00000601220 C17orf78Q8N4C9 275 aa15.76■□□□□ 0.11
CHMP2A-208ENST00000601220 MREGQ8N565 214 aa15.76■□□□□ 0.11
CHMP2A-208ENST00000601220 C1orf162Q8NEQ5 155 aaPredicted RBP15.76■□□□□ 0.11
CHMP2A-208ENST00000601220 PMM1Q92871 262 aa15.76■□□□□ 0.11
CHMP2A-208ENST00000601220 TMEM45BQ96B21 275 aa15.76■□□□□ 0.11
CHMP2A-208ENST00000601220 DDIT4LQ96D03 193 aa15.76■□□□□ 0.11
CHMP2A-208ENST00000601220 BOD1Q96IK1 185 aa15.76■□□□□ 0.11
CHMP2A-208ENST00000601220 MTHFD2LQ9H903 347 aaPredicted RBP15.76■□□□□ 0.11
CHMP2A-208ENST00000601220 PARPBPQ9NWS1 579 aa15.76■□□□□ 0.11
CHMP2A-208ENST00000601220 SLC9A8Q9Y2E8 581 aa15.76■□□□□ 0.11
CHMP2A-208ENST00000601220 TM9SF1O15321 606 aa15.75■□□□□ 0.11
CHMP2A-208ENST00000601220 BGNP21810 368 aa15.75■□□□□ 0.11
CHMP2A-208ENST00000601220 MAP2K6P52564 334 aa15.75■□□□□ 0.11
CHMP2A-208ENST00000601220 NME5P56597 212 aa15.75■□□□□ 0.11
CHMP2A-208ENST00000601220 VLDLRP98155 873 aa15.75■□□□□ 0.11
CHMP2A-208ENST00000601220 RAB35Q15286 201 aa15.75■□□□□ 0.11
CHMP2A-208ENST00000601220 MST1LQ2TV78 715 aa15.75■□□□□ 0.11
CHMP2A-208ENST00000601220 C9orf135Q5VTT2 229 aa15.75■□□□□ 0.11
CHMP2A-208ENST00000601220 PAQR6Q6TCH4 344 aa15.75■□□□□ 0.11
CHMP2A-208ENST00000601220 CASP12Q6UXS9 341 aa15.75■□□□□ 0.11
CHMP2A-208ENST00000601220 PHC2Q8IXK0 858 aa15.75■□□□□ 0.11
CHMP2A-208ENST00000601220 ZNF525Q8N782 197 aa15.75■□□□□ 0.11
CHMP2A-208ENST00000601220 NANOS1Q8WY41 292 aaKnown RBP15.75■□□□□ 0.11
CHMP2A-208ENST00000601220 NAA11Q9BSU3 229 aaPredicted RBP15.75■□□□□ 0.11
CHMP2A-208ENST00000601220 AIG1Q9NVV5 245 aa15.75■□□□□ 0.11
CHMP2A-208ENST00000601220 POU2F3Q9UKI9 436 aa15.75■□□□□ 0.11
CHMP2A-208ENST00000601220 CFAP73A6NFT4 308 aa15.74■□□□□ 0.11
CHMP2A-208ENST00000601220 LIPT2A6NK58 231 aa15.74■□□□□ 0.11
CHMP2A-208ENST00000601220 SDHDO14521 159 aa15.74■□□□□ 0.11
CHMP2A-208ENST00000601220 ACAA2P42765 397 aaKnown RBP15.74■□□□□ 0.11
CHMP2A-208ENST00000601220 P2RY4P51582 365 aa15.74■□□□□ 0.11
CHMP2A-208ENST00000601220 MVDP53602 400 aa15.74■□□□□ 0.11
CHMP2A-208ENST00000601220 TXNL4AP83876 142 aaKnown RBP15.74■□□□□ 0.11
CHMP2A-208ENST00000601220 HPCAP84074 193 aa15.74■□□□□ 0.11
CHMP2A-208ENST00000601220 MRPL2Q5T653 305 aaKnown RBP15.74■□□□□ 0.11
CHMP2A-208ENST00000601220 C1QTNF12Q5T7M4 302 aa15.74■□□□□ 0.11
CHMP2A-208ENST00000601220 CLEC2AQ6UVW9 174 aa15.74■□□□□ 0.11
CHMP2A-208ENST00000601220 TMEM99Q8N816 258 aa15.74■□□□□ 0.11
CHMP2A-208ENST00000601220 C10orf105Q8TEF2 133 aa15.74■□□□□ 0.11
CHMP2A-208ENST00000601220 WDR60Q8WVS4 1066 aa15.74■□□□□ 0.11
CHMP2A-208ENST00000601220 ZNF385AQ96PM9 386 aaKnown RBP15.74■□□□□ 0.11
CHMP2A-208ENST00000601220 SLC6A13Q9NSD5 602 aa15.74■□□□□ 0.11
CHMP2A-208ENST00000601220 RLIMQ9NVW2 624 aa15.74■□□□□ 0.11
CHMP2A-208ENST00000601220 AMDHD2Q9Y303 409 aa15.74■□□□□ 0.11
CHMP2A-208ENST00000601220 GPR45Q9Y5Y3 372 aa15.74■□□□□ 0.11
CHMP2A-208ENST00000601220 IFNA2P01563 188 aa15.73■□□□□ 0.11
CHMP2A-208ENST00000601220 GSNP06396 782 aa15.73■□□□□ 0.11
CHMP2A-208ENST00000601220 PGRP06401 933 aa15.73■□□□□ 0.11
CHMP2A-208ENST00000601220 MPGP29372 298 aa15.73■□□□□ 0.11
CHMP2A-208ENST00000601220 STX3Q13277 289 aa15.73■□□□□ 0.11
CHMP2A-208ENST00000601220 GSTA3Q16772 222 aa15.73■□□□□ 0.11
CHMP2A-208ENST00000601220 SWI5Q1ZZU3 235 aa15.73■□□□□ 0.11
CHMP2A-208ENST00000601220 KRT71Q3SY84 523 aa15.73■□□□□ 0.11
CHMP2A-208ENST00000601220 CHRFAM7AQ494W8 412 aa15.73■□□□□ 0.11
CHMP2A-208ENST00000601220 ZNF621Q6ZSS3 439 aa15.73■□□□□ 0.11
CHMP2A-208ENST00000601220 DEPDC4Q8N2C3 294 aa15.73■□□□□ 0.11
CHMP2A-208ENST00000601220 OR9K2Q8NGE7 335 aa15.73■□□□□ 0.11
CHMP2A-208ENST00000601220 PANX1Q96RD7 426 aa15.73■□□□□ 0.11
CHMP2A-208ENST00000601220 REPIN1Q9BWE0 567 aaKnown RBP15.73■□□□□ 0.11
CHMP2A-208ENST00000601220 SF3B5Q9BWJ5 86 aaKnown RBP15.73■□□□□ 0.11
CHMP2A-208ENST00000601220 TMEM160Q9NX00 188 aa15.73■□□□□ 0.11
CHMP2A-208ENST00000601220 UPB1Q9UBR1 384 aa15.73■□□□□ 0.11
CHMP2A-208ENST00000601220 ATP23Q9Y6H3 246 aa15.73■□□□□ 0.11
CHMP2A-208ENST00000601220 DSPPQ9NZW4 1301 aa15.72■□□□□ 0.11
CHMP2A-208ENST00000601220 CDHR4A6H8M9 788 aa15.72■□□□□ 0.11
CHMP2A-208ENST00000601220 AQP7P3A6NL99 342 aa15.72■□□□□ 0.11
CHMP2A-208ENST00000601220 RNF212BA8MTL3 300 aa15.72■□□□□ 0.11
CHMP2A-208ENST00000601220 RGS16O15492 202 aaPredicted RBP15.72■□□□□ 0.11
CHMP2A-208ENST00000601220 AKR7A3O95154 331 aa15.72■□□□□ 0.11
CHMP2A-208ENST00000601220 DBIP07108 87 aaKnown RBP15.72■□□□□ 0.11
CHMP2A-208ENST00000601220 SLC25A16P16260 332 aa15.72■□□□□ 0.11
CHMP2A-208ENST00000601220 IL7RP16871 459 aa15.72■□□□□ 0.11
CHMP2A-208ENST00000601220 APOBEC3AP31941 199 aaPredicted RBP15.72■□□□□ 0.11
CHMP2A-208ENST00000601220 EFNA4P52798 201 aa15.72■□□□□ 0.11
CHMP2A-208ENST00000601220 BST1Q10588 318 aa15.72■□□□□ 0.11
CHMP2A-208ENST00000601220 CEACAM7Q14002 265 aa15.72■□□□□ 0.11
CHMP2A-208ENST00000601220 OTUD3Q5T2D3 398 aaPredicted RBP15.72■□□□□ 0.11
CHMP2A-208ENST00000601220 SPATA19Q7Z5L4 167 aa15.72■□□□□ 0.11
CHMP2A-208ENST00000601220 KIRREL3Q8IZU9 778 aa15.72■□□□□ 0.11
CHMP2A-208ENST00000601220 TRIML2Q8N7C3 387 aa15.72■□□□□ 0.11
CHMP2A-208ENST00000601220 PNPT1Q8TCS8 783 aaKnown RBP15.72■□□□□ 0.11
CHMP2A-208ENST00000601220 OR52E6Q96RD3 313 aa15.72■□□□□ 0.11
CHMP2A-208ENST00000601220 PIF1Q9H611 641 aa15.72■□□□□ 0.11
CHMP2A-208ENST00000601220 MANSC1Q9H8J5 431 aa15.72■□□□□ 0.11
CHMP2A-208ENST00000601220 PRDM4Q9UKN5 801 aa15.72■□□□□ 0.11
CHMP2A-208ENST00000601220 CHST2Q9Y4C5 530 aa15.72■□□□□ 0.11
CHMP2A-208ENST00000601220 VWC2LB2RUY7 222 aa15.71■□□□□ 0.11
CHMP2A-208ENST00000601220 ATP6V1G2-DDX39BF2Z307 99 aa15.71■□□□□ 0.11
CHMP2A-208ENST00000601220 LY6HO94772 140 aa15.71■□□□□ 0.11
CHMP2A-208ENST00000601220 F12P00748 615 aaPredicted RBP15.71■□□□□ 0.11
CHMP2A-208ENST00000601220 GKN3PP0CG01 181 aa15.71■□□□□ 0.11
CHMP2A-208ENST00000601220 FAM157CP0CG43 387 aa15.71■□□□□ 0.11
CHMP2A-208ENST00000601220 NR2F1P10589 423 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms