RNA–Protein interactions for RNA: ENST00000600006.5

CHMP2A-205, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-205ENST00000600006 RSPO3Q9BXY4 272 aaPredicted RBP7.09□□□□□ -1.27
CHMP2A-205ENST00000600006 C1orf21Q9H246 121 aa7.09□□□□□ -1.27
CHMP2A-205ENST00000600006 ARMC7Q9H6L4 198 aa7.09□□□□□ -1.27
CHMP2A-205ENST00000600006 C12orf49Q9H741 205 aa7.09□□□□□ -1.27
CHMP2A-205ENST00000600006 KAT8Q9H7Z6 458 aaKnown RBP7.09□□□□□ -1.27
CHMP2A-205ENST00000600006 FANCFQ9NPI8 374 aa7.09□□□□□ -1.27
CHMP2A-205ENST00000600006 ARL8BQ9NVJ2 186 aa7.09□□□□□ -1.27
CHMP2A-205ENST00000600006 KLHL28Q9NXS3 571 aa7.09□□□□□ -1.27
CHMP2A-205ENST00000600006 ZNF226Q9NYT6 803 aa7.09□□□□□ -1.27
CHMP2A-205ENST00000600006 TMEM181Q9P2C4 612 aa7.09□□□□□ -1.27
CHMP2A-205ENST00000600006 ABCD2Q9UBJ2 740 aa7.09□□□□□ -1.27
CHMP2A-205ENST00000600006 ST6GALNAC2Q9UJ37 374 aa7.09□□□□□ -1.27
CHMP2A-205ENST00000600006 ZNF232Q9UNY5 417 aa7.09□□□□□ -1.27
CHMP2A-205ENST00000600006 ANGPT4Q9Y264 503 aa7.09□□□□□ -1.27
CHMP2A-205ENST00000600006 TRAPPC4Q9Y296 219 aa7.09□□□□□ -1.27
CHMP2A-205ENST00000600006 HRNRQ86YZ3 2850 aaPredicted RBP7.08□□□□□ -1.28
CHMP2A-205ENST00000600006 ZC3H12DA2A288 527 aaKnown RBP7.08□□□□□ -1.28
CHMP2A-205ENST00000600006 DEFB108AA8MXU0 73 aa7.08□□□□□ -1.28
CHMP2A-205ENST00000600006 FAM220BPB1ANY3 271 aa7.08□□□□□ -1.28
CHMP2A-205ENST00000600006 TMEM229AB2RXF0 380 aa7.08□□□□□ -1.28
CHMP2A-205ENST00000600006 ZNF814B7Z6K7 855 aa7.08□□□□□ -1.28
CHMP2A-205ENST00000600006 CASKO14936 926 aa7.08□□□□□ -1.28
CHMP2A-205ENST00000600006 FRS3O43559 492 aa7.08□□□□□ -1.28
CHMP2A-205ENST00000600006 PRG2P13727 222 aa7.08□□□□□ -1.28
CHMP2A-205ENST00000600006 CCNA2P20248 432 aa7.08□□□□□ -1.28
CHMP2A-205ENST00000600006 LOXP28300 417 aaPredicted RBP7.08□□□□□ -1.28
CHMP2A-205ENST00000600006 RASSF2P50749 326 aa7.08□□□□□ -1.28
CHMP2A-205ENST00000600006 PCBP3P57721 371 aaKnown RBP7.08□□□□□ -1.28
CHMP2A-205ENST00000600006 COPZ1P61923 177 aa7.08□□□□□ -1.28
CHMP2A-205ENST00000600006 SLC35A1P78382 337 aa7.08□□□□□ -1.28
CHMP2A-205ENST00000600006 CBX1P83916 185 aa7.08□□□□□ -1.28
CHMP2A-205ENST00000600006 H3F3AP84243 136 aa7.08□□□□□ -1.28
CHMP2A-205ENST00000600006 SCARB2Q14108 478 aa7.08□□□□□ -1.28
CHMP2A-205ENST00000600006 SELPLGQ14242 412 aa7.08□□□□□ -1.28
CHMP2A-205ENST00000600006 POU4F3Q15319 338 aa7.08□□□□□ -1.28
CHMP2A-205ENST00000600006 ADRM1Q16186 407 aa7.08□□□□□ -1.28
CHMP2A-205ENST00000600006 DNAL1Q4LDG9 190 aa7.08□□□□□ -1.28
CHMP2A-205ENST00000600006 FBXW10Q5XX13 1052 aa7.08□□□□□ -1.28
CHMP2A-205ENST00000600006 C6orf89Q6UWU4 347 aa7.08□□□□□ -1.28
CHMP2A-205ENST00000600006 C22orf34Q6ZV56 151 aa7.08□□□□□ -1.28
CHMP2A-205ENST00000600006 ATG4DQ86TL0 474 aaPredicted RBP7.08□□□□□ -1.28
CHMP2A-205ENST00000600006 COMTD1Q86VU5 262 aa7.08□□□□□ -1.28
CHMP2A-205ENST00000600006 LSRQ86X29 649 aaPredicted RBP7.08□□□□□ -1.28
CHMP2A-205ENST00000600006 KRT73Q86Y46 540 aa7.08□□□□□ -1.28
CHMP2A-205ENST00000600006 PTOV1Q86YD1 416 aa7.08□□□□□ -1.28
CHMP2A-205ENST00000600006 CADM2Q8N3J6 435 aa7.08□□□□□ -1.28
CHMP2A-205ENST00000600006 HIPK4Q8NE63 616 aa7.08□□□□□ -1.28
CHMP2A-205ENST00000600006 BHLHE22Q8NFJ8 381 aaPredicted RBP7.08□□□□□ -1.28
CHMP2A-205ENST00000600006 OR10A6Q8NH74 314 aa7.08□□□□□ -1.28
CHMP2A-205ENST00000600006 PIGXQ8TBF5 258 aa7.08□□□□□ -1.28
CHMP2A-205ENST00000600006 C3orf49Q96BT1 292 aa7.08□□□□□ -1.28
CHMP2A-205ENST00000600006 ZNF607Q96SK3 696 aa7.08□□□□□ -1.28
CHMP2A-205ENST00000600006 SPATA5L1Q9BVQ7 753 aa7.08□□□□□ -1.28
CHMP2A-205ENST00000600006 POTEKPQ9BYX7 375 aa7.08□□□□□ -1.28
CHMP2A-205ENST00000600006 KLHL4Q9C0H6 718 aa7.08□□□□□ -1.28
CHMP2A-205ENST00000600006 LIME1Q9H400 295 aa7.08□□□□□ -1.28
CHMP2A-205ENST00000600006 EVA1AQ9H8M9 152 aa7.08□□□□□ -1.28
CHMP2A-205ENST00000600006 PLEKHF2Q9H8W4 249 aa7.08□□□□□ -1.28
CHMP2A-205ENST00000600006 EMC3Q9P0I2 261 aa7.08□□□□□ -1.28
CHMP2A-205ENST00000600006 C6orf203Q9P0P8 240 aaPredicted RBP7.08□□□□□ -1.28
CHMP2A-205ENST00000600006 GPR52Q9Y2T5 361 aa7.08□□□□□ -1.28
CHMP2A-205ENST00000600006 OTOGQ6ZRI0 2925 aa7.07□□□□□ -1.28
CHMP2A-205ENST00000600006 AKAP9Q99996 3911 aa7.07□□□□□ -1.28
CHMP2A-205ENST00000600006 PRORSD1PA6NEY8 169 aa7.07□□□□□ -1.28
CHMP2A-205ENST00000600006 LIPT2A6NK58 231 aa7.07□□□□□ -1.28
CHMP2A-205ENST00000600006 A8MVM7 634 aa7.07□□□□□ -1.28
CHMP2A-205ENST00000600006 GPR171O14626 319 aa7.07□□□□□ -1.28
CHMP2A-205ENST00000600006 EIF1BO60739 113 aaKnown RBP7.07□□□□□ -1.28
CHMP2A-205ENST00000600006 RAMP1O60894 148 aa7.07□□□□□ -1.28
CHMP2A-205ENST00000600006 FZD7O75084 574 aa7.07□□□□□ -1.28
CHMP2A-205ENST00000600006 NPIPB7O75200 414 aa7.07□□□□□ -1.28
CHMP2A-205ENST00000600006 UBOX5O94941 541 aa7.07□□□□□ -1.28
CHMP2A-205ENST00000600006 CNOT4O95628 575 aaKnown RBP7.07□□□□□ -1.28
CHMP2A-205ENST00000600006 IFNA14P01570 189 aa7.07□□□□□ -1.28
CHMP2A-205ENST00000600006 THBDP07204 575 aa7.07□□□□□ -1.28
CHMP2A-205ENST00000600006 COX5AP20674 150 aa7.07□□□□□ -1.28
CHMP2A-205ENST00000600006 CXCR1P25024 350 aa7.07□□□□□ -1.28
CHMP2A-205ENST00000600006 EDNRAP25101 427 aa7.07□□□□□ -1.28
CHMP2A-205ENST00000600006 PCGF2P35227 344 aa7.07□□□□□ -1.28
CHMP2A-205ENST00000600006 IDUAP35475 653 aa7.07□□□□□ -1.28
CHMP2A-205ENST00000600006 SLC7A2P52569 658 aa7.07□□□□□ -1.28
CHMP2A-205ENST00000600006 IST1P53990 364 aa7.07□□□□□ -1.28
CHMP2A-205ENST00000600006 OR2B6P58173 313 aa7.07□□□□□ -1.28
CHMP2A-205ENST00000600006 PSME3P61289 254 aa7.07□□□□□ -1.28
CHMP2A-205ENST00000600006 GABPB1Q06547 395 aaPredicted RBP7.07□□□□□ -1.28
CHMP2A-205ENST00000600006 BNIP1Q12981 228 aa7.07□□□□□ -1.28
CHMP2A-205ENST00000600006 VEZF1Q14119 521 aa7.07□□□□□ -1.28
CHMP2A-205ENST00000600006 P2RY6Q15077 328 aa7.07□□□□□ -1.28
CHMP2A-205ENST00000600006 VMACQ2NL98 169 aa7.07□□□□□ -1.28
CHMP2A-205ENST00000600006 GLIPR1L2Q4G1C9 344 aa7.07□□□□□ -1.28
CHMP2A-205ENST00000600006 RABL3Q5HYI8 236 aa7.07□□□□□ -1.28
CHMP2A-205ENST00000600006 SAMD4BQ5PRF9 694 aaKnown RBP7.07□□□□□ -1.28
CHMP2A-205ENST00000600006 SFRP5Q5T4F7 317 aa7.07□□□□□ -1.28
CHMP2A-205ENST00000600006 ANKRD34AQ69YU3 496 aa7.07□□□□□ -1.28
CHMP2A-205ENST00000600006 PAQR6Q6TCH4 344 aa7.07□□□□□ -1.28
CHMP2A-205ENST00000600006 SPNS3Q6ZMD2 512 aa7.07□□□□□ -1.28
CHMP2A-205ENST00000600006 GALNT5Q7Z7M9 940 aa7.07□□□□□ -1.28
CHMP2A-205ENST00000600006 CXorf67Q86X51 503 aaPredicted RBP7.07□□□□□ -1.28
CHMP2A-205ENST00000600006 CALHM3Q86XJ0 350 aa7.07□□□□□ -1.28
CHMP2A-205ENST00000600006 SLC15A3Q8IY34 581 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms