RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 TAS2R16Q9NYV7 291 aa12.89□□□□□ -0.35
IRF3-223ENST00000599223 SLC35A3Q9Y2D2 325 aa12.89□□□□□ -0.35
IRF3-223ENST00000599223 ANK2Q01484 3957 aa12.89□□□□□ -0.35
IRF3-223ENST00000599223 ZC3H12DA2A288 527 aaKnown RBP12.88□□□□□ -0.35
IRF3-223ENST00000599223 FAM234BA2RU67 622 aa12.88□□□□□ -0.35
IRF3-223ENST00000599223 TRPC5OSA6NMA1 111 aa12.88□□□□□ -0.35
IRF3-223ENST00000599223 CCDC22O60826 627 aa12.88□□□□□ -0.35
IRF3-223ENST00000599223 CPSF4O95639 269 aaKnown RBP12.88□□□□□ -0.35
IRF3-223ENST00000599223 APOBEC1P41238 236 aaKnown RBP12.88□□□□□ -0.35
IRF3-223ENST00000599223 KHKP50053 298 aa12.88□□□□□ -0.35
IRF3-223ENST00000599223 H3F3AP84243 136 aa12.88□□□□□ -0.35
IRF3-223ENST00000599223 MAD2L1Q13257 205 aaPredicted RBP12.88□□□□□ -0.35
IRF3-223ENST00000599223 GABRA6Q16445 453 aa12.88□□□□□ -0.35
IRF3-223ENST00000599223 NRF1Q16656 503 aa12.88□□□□□ -0.35
IRF3-223ENST00000599223 SLC22A25Q6T423 547 aa12.88□□□□□ -0.35
IRF3-223ENST00000599223 TMEM108Q6UXF1 575 aa12.88□□□□□ -0.35
IRF3-223ENST00000599223 CASP12Q6UXS9 341 aa12.88□□□□□ -0.35
IRF3-223ENST00000599223 ANKFN1Q8N957 763 aa12.88□□□□□ -0.35
IRF3-223ENST00000599223 WDR31Q8NA23 367 aa12.88□□□□□ -0.35
IRF3-223ENST00000599223 ZNF563Q8TA94 476 aa12.88□□□□□ -0.35
IRF3-223ENST00000599223 PIGXQ8TBF5 258 aa12.88□□□□□ -0.35
IRF3-223ENST00000599223 NEURL3Q96EH8 262 aa12.88□□□□□ -0.35
IRF3-223ENST00000599223 TEX37Q96LM6 180 aa12.88□□□□□ -0.35
IRF3-223ENST00000599223 SORT1Q99523 831 aa12.88□□□□□ -0.35
IRF3-223ENST00000599223 DHRS9Q9BPW9 319 aa12.88□□□□□ -0.35
IRF3-223ENST00000599223 C1QTNF6Q9BXI9 259 aa12.88□□□□□ -0.35
IRF3-223ENST00000599223 AMBRA1Q9C0C7 1298 aa12.88□□□□□ -0.35
IRF3-223ENST00000599223 EXOSC3Q9NQT5 275 aaKnown RBP12.88□□□□□ -0.35
IRF3-223ENST00000599223 CBLN4Q9NTU7 201 aa12.88□□□□□ -0.35
IRF3-223ENST00000599223 ASB6Q9NWX5 421 aa12.88□□□□□ -0.35
IRF3-223ENST00000599223 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.87□□□□□ -0.357e-9■■■■■ 30
IRF3-223ENST00000599223 CIB4A0PJX0 185 aa12.87□□□□□ -0.35
IRF3-223ENST00000599223 TMEM72A0PK05 275 aa12.87□□□□□ -0.35
IRF3-223ENST00000599223 RNF212BA8MTL3 300 aa12.87□□□□□ -0.35
IRF3-223ENST00000599223 A8MV72 311 aaPredicted RBP12.87□□□□□ -0.35
IRF3-223ENST00000599223 M0R1B8 84 aa12.87□□□□□ -0.35
IRF3-223ENST00000599223 HMGN4O00479 90 aa12.87□□□□□ -0.35
IRF3-223ENST00000599223 HDAC3O15379 428 aa12.87□□□□□ -0.35
IRF3-223ENST00000599223 LY6HO94772 140 aa12.87□□□□□ -0.35
IRF3-223ENST00000599223 CHRM4P08173 479 aa12.87□□□□□ -0.35
IRF3-223ENST00000599223 GUSBP08236 651 aa12.87□□□□□ -0.35
IRF3-223ENST00000599223 IMPDH2P12268 514 aa12.87□□□□□ -0.35
IRF3-223ENST00000599223 UQCRC2P22695 453 aa12.87□□□□□ -0.35
IRF3-223ENST00000599223 IDH2P48735 452 aaKnown RBP12.87□□□□□ -0.35
IRF3-223ENST00000599223 OR2B6P58173 313 aa12.87□□□□□ -0.35
IRF3-223ENST00000599223 SMU1Q2TAY7 513 aa12.87□□□□□ -0.35
IRF3-223ENST00000599223 TMEM249Q2WGJ8 235 aa12.87□□□□□ -0.35
IRF3-223ENST00000599223 ATAD3BQ5T9A4 648 aa12.87□□□□□ -0.35
IRF3-223ENST00000599223 AP1ARQ63HQ0 302 aa12.87□□□□□ -0.35
IRF3-223ENST00000599223 MUC15Q8N387 334 aa12.87□□□□□ -0.35
IRF3-223ENST00000599223 TESCQ96BS2 214 aa12.87□□□□□ -0.35
IRF3-223ENST00000599223 ZHX1-C8orf76Q96EF9 292 aa12.87□□□□□ -0.35
IRF3-223ENST00000599223 MUS81Q96NY9 551 aa12.87□□□□□ -0.35
IRF3-223ENST00000599223 SLC35A5Q9BS91 424 aa12.87□□□□□ -0.35
IRF3-223ENST00000599223 DPY30Q9C005 99 aa12.87□□□□□ -0.35
IRF3-223ENST00000599223 SLC38A1Q9H2H9 487 aa12.87□□□□□ -0.35
IRF3-223ENST00000599223 POLE3Q9NRF9 147 aa12.87□□□□□ -0.35
IRF3-223ENST00000599223 SLC7A10Q9NS82 523 aa12.87□□□□□ -0.35
IRF3-223ENST00000599223 PNPOQ9NVS9 261 aa12.87□□□□□ -0.35
IRF3-223ENST00000599223 HAO1Q9UJM8 370 aa12.87□□□□□ -0.35
IRF3-223ENST00000599223 POU2F3Q9UKI9 436 aa12.87□□□□□ -0.35
IRF3-223ENST00000599223 TRIM33Q9UPN9 1127 aa12.87□□□□□ -0.35
IRF3-223ENST00000599223 HDGFL3Q9Y3E1 203 aa12.87□□□□□ -0.35
IRF3-223ENST00000599223 SPIN1Q9Y657 262 aaPredicted RBP12.87□□□□□ -0.35
IRF3-223ENST00000599223 TMED7-TICAM2A0A0A6YYA0 188 aa12.86□□□□□ -0.35
IRF3-223ENST00000599223 PRSS51A0A1B0GVH4 220 aa12.86□□□□□ -0.35
IRF3-223ENST00000599223 DNPH1O43598 174 aa12.86□□□□□ -0.35
IRF3-223ENST00000599223 ALDOCP09972 364 aaKnown RBP12.86□□□□□ -0.35
IRF3-223ENST00000599223 RPS4Y1P22090 263 aaKnown RBP12.86□□□□□ -0.35
IRF3-223ENST00000599223 PTAFRP25105 342 aa12.86□□□□□ -0.35
IRF3-223ENST00000599223 CDKN2CP42773 168 aa12.86□□□□□ -0.35
IRF3-223ENST00000599223 KCNJ10P78508 379 aa12.86□□□□□ -0.35
IRF3-223ENST00000599223 SYPL1Q16563 259 aa12.86□□□□□ -0.35
IRF3-223ENST00000599223 FAM174BQ3ZCQ3 159 aa12.86□□□□□ -0.35
IRF3-223ENST00000599223 GPAT3Q53EU6 434 aa12.86□□□□□ -0.35
IRF3-223ENST00000599223 TSPO2Q5TGU0 170 aa12.86□□□□□ -0.35
IRF3-223ENST00000599223 SSX8Q7RTT4 187 aa12.86□□□□□ -0.35
IRF3-223ENST00000599223 RNF130Q86XS8 419 aa12.86□□□□□ -0.35
IRF3-223ENST00000599223 OIT3Q8WWZ8 545 aa12.86□□□□□ -0.35
IRF3-223ENST00000599223 NANOS1Q8WY41 292 aaKnown RBP12.86□□□□□ -0.35
IRF3-223ENST00000599223 RADILQ96JH8 1075 aa12.86□□□□□ -0.35
IRF3-223ENST00000599223 ADAD1Q96M93 576 aaKnown RBP12.86□□□□□ -0.35
IRF3-223ENST00000599223 RHNO1Q9BSD3 238 aa12.86□□□□□ -0.35
IRF3-223ENST00000599223 INPP5KQ9BT40 448 aa12.86□□□□□ -0.35
IRF3-223ENST00000599223 NUF2Q9BZD4 464 aa12.86□□□□□ -0.35
IRF3-223ENST00000599223 MRGBPQ9NV56 204 aa12.86□□□□□ -0.35
IRF3-223ENST00000599223 TMEM181Q9P2C4 612 aa12.86□□□□□ -0.35
IRF3-223ENST00000599223 OSGIN1Q9UJX0 560 aa12.86□□□□□ -0.35
IRF3-223ENST00000599223 TMED7Q9Y3B3 224 aa12.86□□□□□ -0.35
IRF3-223ENST00000599223 FLVCR1Q9Y5Y0 555 aa12.86□□□□□ -0.35
IRF3-223ENST00000599223 AGAP5A6NIR3 686 aa12.85□□□□□ -0.35
IRF3-223ENST00000599223 ELOA3DA6NLF2 546 aaPredicted RBP12.85□□□□□ -0.35
IRF3-223ENST00000599223 E9PBE3 544 aa12.85□□□□□ -0.35
IRF3-223ENST00000599223 ATP6V1G2-DDX39BF2Z307 99 aa12.85□□□□□ -0.35
IRF3-223ENST00000599223 H7C417 338 aa12.85□□□□□ -0.35
IRF3-223ENST00000599223 GPR171O14626 319 aa12.85□□□□□ -0.35
IRF3-223ENST00000599223 MRPL33O75394 65 aaKnown RBP12.85□□□□□ -0.35
IRF3-223ENST00000599223 ATP5HO75947 161 aa12.85□□□□□ -0.35
IRF3-223ENST00000599223 AGR2O95994 175 aa12.85□□□□□ -0.35
IRF3-223ENST00000599223 ZNF16P17020 682 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms