RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 DEF8Q6ZN54 512 aa17.57■□□□□ 0.4
SHKBP1-214ENST00000597396 SLC43A2Q8N370 569 aa17.57■□□□□ 0.4
SHKBP1-214ENST00000597396 STK35Q8TDR2 534 aa17.57■□□□□ 0.4
SHKBP1-214ENST00000597396 ABHD3Q8WU67 409 aa17.57■□□□□ 0.4
SHKBP1-214ENST00000597396 LRRC46Q96FV0 321 aa17.57■□□□□ 0.4
SHKBP1-214ENST00000597396 GMPPAQ96IJ6 420 aaPredicted RBP17.57■□□□□ 0.4
SHKBP1-214ENST00000597396 TAPBPLQ9BX59 468 aa17.57■□□□□ 0.4
SHKBP1-214ENST00000597396 CHST11Q9NPF2 352 aa17.57■□□□□ 0.4
SHKBP1-214ENST00000597396 GLRX2Q9NS18 164 aa17.57■□□□□ 0.4
SHKBP1-214ENST00000597396 EMC9Q9Y3B6 208 aa17.57■□□□□ 0.4
SHKBP1-214ENST00000597396 SMAD9O15198 467 aaKnown RBP17.56■□□□□ 0.4
SHKBP1-214ENST00000597396 DNPH1O43598 174 aa17.56■□□□□ 0.4
SHKBP1-214ENST00000597396 PRKD3O94806 890 aa17.56■□□□□ 0.4
SHKBP1-214ENST00000597396 GPIP06744 558 aa17.56■□□□□ 0.4
SHKBP1-214ENST00000597396 IMPDH2P12268 514 aa17.56■□□□□ 0.4
SHKBP1-214ENST00000597396 GRNP28799 593 aaKnown RBP17.56■□□□□ 0.4
SHKBP1-214ENST00000597396 OR1E2P47887 323 aa17.56■□□□□ 0.4
SHKBP1-214ENST00000597396 ASCL1P50553 236 aa17.56■□□□□ 0.4
SHKBP1-214ENST00000597396 SLC35A1P78382 337 aa17.56■□□□□ 0.4
SHKBP1-214ENST00000597396 SPATS1Q496A3 300 aa17.56■□□□□ 0.4
SHKBP1-214ENST00000597396 C1orf140Q5VVS0 124 aa17.56■□□□□ 0.4
SHKBP1-214ENST00000597396 VWA1Q6PCB0 445 aa17.56■□□□□ 0.4
SHKBP1-214ENST00000597396 CBLL1Q75N03 491 aa17.56■□□□□ 0.4
SHKBP1-214ENST00000597396 ADAMTS16Q8TE57 1224 aa17.56■□□□□ 0.4
SHKBP1-214ENST00000597396 SLC38A4Q969I6 547 aa17.56■□□□□ 0.4
SHKBP1-214ENST00000597396 PIGMQ9H3S5 423 aa17.56■□□□□ 0.4
SHKBP1-214ENST00000597396 CD300AQ9UGN4 299 aa17.56■□□□□ 0.4
SHKBP1-214ENST00000597396 MAGEL2Q9UJ55 1249 aa17.56■□□□□ 0.4
SHKBP1-214ENST00000597396 RPS6KA6Q9UK32 745 aa17.56■□□□□ 0.4
SHKBP1-214ENST00000597396 TRAPPC13A5PLN9 417 aa17.55■□□□□ 0.4
SHKBP1-214ENST00000597396 SS18L1O75177 396 aaPredicted RBP17.55■□□□□ 0.4
SHKBP1-214ENST00000597396 TNFSF13O75888 250 aa17.55■□□□□ 0.4
SHKBP1-214ENST00000597396 SMNDC1O75940 238 aaKnown RBP eCLIP17.55■□□□□ 0.4
SHKBP1-214ENST00000597396 FPR1P21462 350 aa17.55■□□□□ 0.4
SHKBP1-214ENST00000597396 KIR2DL2P43627 348 aaPredicted RBP17.55■□□□□ 0.4
SHKBP1-214ENST00000597396 CDH12P55289 794 aa17.55■□□□□ 0.4
SHKBP1-214ENST00000597396 RASGEF1BQ0VAM2 473 aa17.55■□□□□ 0.4
SHKBP1-214ENST00000597396 CEACAM7Q14002 265 aa17.55■□□□□ 0.4
SHKBP1-214ENST00000597396 OR7A5Q15622 319 aa17.55■□□□□ 0.4
SHKBP1-214ENST00000597396 IFI44LQ53G44 452 aa17.55■□□□□ 0.4
SHKBP1-214ENST00000597396 TMEM201Q5SNT2 666 aa17.55■□□□□ 0.4
SHKBP1-214ENST00000597396 SWT1Q5T5J6 900 aaKnown RBP17.55■□□□□ 0.4
SHKBP1-214ENST00000597396 C5orf46Q6UWT4 87 aa17.55■□□□□ 0.4
SHKBP1-214ENST00000597396 FKBP9P1Q75LS8 142 aa17.55■□□□□ 0.4
SHKBP1-214ENST00000597396 FAM214BQ7L5A3 538 aa17.55■□□□□ 0.4
SHKBP1-214ENST00000597396 VTCN1Q7Z7D3 282 aa17.55■□□□□ 0.4
SHKBP1-214ENST00000597396 NAA11Q9BSU3 229 aaPredicted RBP17.55■□□□□ 0.4
SHKBP1-214ENST00000597396 PCDHAC1Q9H158 963 aa17.55■□□□□ 0.4
SHKBP1-214ENST00000597396 KLHL9Q9P2J3 617 aa17.55■□□□□ 0.4
SHKBP1-214ENST00000597396 FREM1Q5H8C1 2179 aa17.55■□□□□ 0.4
SHKBP1-214ENST00000597396 A0A087WUJ7 227 aa17.54■□□□□ 0.4
SHKBP1-214ENST00000597396 CHP2O43745 196 aa17.54■□□□□ 0.4
SHKBP1-214ENST00000597396 EIF1BO60739 113 aaKnown RBP17.54■□□□□ 0.4
SHKBP1-214ENST00000597396 CYTIPO60759 359 aa17.54■□□□□ 0.4
SHKBP1-214ENST00000597396 KLK2P20151 261 aa17.54■□□□□ 0.4
SHKBP1-214ENST00000597396 MSX2P35548 267 aaPredicted RBP17.54■□□□□ 0.4
SHKBP1-214ENST00000597396 TAS2R41P59536 307 aa17.54■□□□□ 0.4
SHKBP1-214ENST00000597396 GUSBP1Q15486 140 aa17.54■□□□□ 0.4
SHKBP1-214ENST00000597396 BTLAQ7Z6A9 289 aa17.54■□□□□ 0.4
SHKBP1-214ENST00000597396 LUZP2Q86TE4 346 aa17.54■□□□□ 0.4
SHKBP1-214ENST00000597396 ARHGAP24Q8N264 748 aa17.54■□□□□ 0.4
SHKBP1-214ENST00000597396 OR6K3Q8NGY3 331 aa17.54■□□□□ 0.4
SHKBP1-214ENST00000597396 PIGXQ8TBF5 258 aa17.54■□□□□ 0.4
SHKBP1-214ENST00000597396 GEMIN6Q8WXD5 167 aaKnown RBP17.54■□□□□ 0.4
SHKBP1-214ENST00000597396 STARD4Q96DR4 205 aa17.54■□□□□ 0.4
SHKBP1-214ENST00000597396 HSH2DQ96JZ2 352 aa17.54■□□□□ 0.4
SHKBP1-214ENST00000597396 PROCRQ9UNN8 238 aa17.54■□□□□ 0.4
SHKBP1-214ENST00000597396 SNX13Q9Y5W8 968 aa17.54■□□□□ 0.4
SHKBP1-214ENST00000597396 LIPT2A6NK58 231 aa17.53■□□□□ 0.4
SHKBP1-214ENST00000597396 C19orf84I3L1E1 186 aa17.53■□□□□ 0.4
SHKBP1-214ENST00000597396 NPIPB7O75200 414 aa17.53■□□□□ 0.4
SHKBP1-214ENST00000597396 IFNW1P05000 195 aa17.53■□□□□ 0.4
SHKBP1-214ENST00000597396 GTF2E2P29084 291 aaKnown RBP17.53■□□□□ 0.4
SHKBP1-214ENST00000597396 AGTR1P30556 359 aa17.53■□□□□ 0.4
SHKBP1-214ENST00000597396 RPS5P46782 204 aaKnown RBP17.53■□□□□ 0.4
SHKBP1-214ENST00000597396 EGR4Q05215 589 aa17.53■□□□□ 0.4
SHKBP1-214ENST00000597396 TFF3Q07654 80 aa17.53■□□□□ 0.4
SHKBP1-214ENST00000597396 SP5Q6BEB4 398 aaPredicted RBP17.53■□□□□ 0.4
SHKBP1-214ENST00000597396 P3H2Q8IVL5 708 aa17.53■□□□□ 0.4
SHKBP1-214ENST00000597396 TUSC5Q8IXB3 177 aa17.53■□□□□ 0.4
SHKBP1-214ENST00000597396 SLC25A36Q96CQ1 311 aa17.53■□□□□ 0.4
SHKBP1-214ENST00000597396 SLC41A3Q96GZ6 507 aa17.53■□□□□ 0.4
SHKBP1-214ENST00000597396 NSMCE2Q96MF7 247 aa17.53■□□□□ 0.4
SHKBP1-214ENST00000597396 EPYCQ99645 322 aa17.53■□□□□ 0.4
SHKBP1-214ENST00000597396 TACO1Q9BSH4 297 aaKnown RBP17.53■□□□□ 0.4
SHKBP1-214ENST00000597396 POLR2J2Q9GZM3 115 aaKnown RBP17.53■□□□□ 0.4
SHKBP1-214ENST00000597396 POLR2J3Q9H1A7 115 aaKnown RBP17.53■□□□□ 0.4
SHKBP1-214ENST00000597396 C1orf21Q9H246 121 aa17.53■□□□□ 0.4
SHKBP1-214ENST00000597396 GP6Q9HCN6 339 aa17.53■□□□□ 0.4
SHKBP1-214ENST00000597396 TAS2R1Q9NYW7 299 aa17.53■□□□□ 0.4
SHKBP1-214ENST00000597396 KLHL13Q9P2N7 655 aa17.53■□□□□ 0.4
SHKBP1-214ENST00000597396 SLC7A7Q9UM01 511 aa17.53■□□□□ 0.4
SHKBP1-214ENST00000597396 PRPF19Q9UMS4 504 aaKnown RBP17.53■□□□□ 0.4
SHKBP1-214ENST00000597396 SAMD4AQ9UPU9 718 aaKnown RBP17.53■□□□□ 0.4
SHKBP1-214ENST00000597396 MYO9AB2RTY4 2548 aa17.52■□□□□ 0.4
SHKBP1-214ENST00000597396 TRAV36DV7A0A075B6V5 113 aa17.52■□□□□ 0.4
SHKBP1-214ENST00000597396 MSTNO14793 375 aa17.52■□□□□ 0.4
SHKBP1-214ENST00000597396 ARPC2O15144 300 aa17.52■□□□□ 0.4
SHKBP1-214ENST00000597396 OR2T1O43869 369 aa17.52■□□□□ 0.4
SHKBP1-214ENST00000597396 PTNP21246 168 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms