RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 SPATA21Q7Z572 469 aa9.75□□□□□ -0.85
SHKBP1-206ENST00000595523 ARMC8Q8IUR7 673 aa9.75□□□□□ -0.85
SHKBP1-206ENST00000595523 LSMEM1Q8N8F7 131 aa9.75□□□□□ -0.85
SHKBP1-206ENST00000595523 SMYD1Q8NB12 490 aa9.75□□□□□ -0.85
SHKBP1-206ENST00000595523 OR8J3Q8NGG0 315 aa9.75□□□□□ -0.85
SHKBP1-206ENST00000595523 TAMM41Q96BW9 452 aa9.75□□□□□ -0.85
SHKBP1-206ENST00000595523 RCN3Q96D15 328 aa9.75□□□□□ -0.85
SHKBP1-206ENST00000595523 ZNF607Q96SK3 696 aa9.75□□□□□ -0.85
SHKBP1-206ENST00000595523 ELAC2Q9BQ52 826 aaKnown RBP9.75□□□□□ -0.85
SHKBP1-206ENST00000595523 SPATA5L1Q9BVQ7 753 aa9.75□□□□□ -0.85
SHKBP1-206ENST00000595523 POLDIP3Q9BY77 421 aaKnown RBP9.75□□□□□ -0.85
SHKBP1-206ENST00000595523 POTEKPQ9BYX7 375 aa9.75□□□□□ -0.85
SHKBP1-206ENST00000595523 CLEC4MQ9H2X3 399 aaPredicted RBP9.75□□□□□ -0.85
SHKBP1-206ENST00000595523 LIME1Q9H400 295 aa9.75□□□□□ -0.85
SHKBP1-206ENST00000595523 HEATR1Q9H583 2144 aaKnown RBP9.75□□□□□ -0.85
SHKBP1-206ENST00000595523 PIF1Q9H611 641 aa9.75□□□□□ -0.85
SHKBP1-206ENST00000595523 MED13LQ71F56 2210 aa9.75□□□□□ -0.85
SHKBP1-206ENST00000595523 ACANP16112 2415 aa9.74□□□□□ -0.85
SHKBP1-206ENST00000595523 IGKV1D-42A0A075B6H8 117 aa9.74□□□□□ -0.85
SHKBP1-206ENST00000595523 A0A1B0GWA3 101 aa9.74□□□□□ -0.85
SHKBP1-206ENST00000595523 PRORSD1PA6NEY8 169 aa9.74□□□□□ -0.85
SHKBP1-206ENST00000595523 A8MVM7 634 aa9.74□□□□□ -0.85
SHKBP1-206ENST00000595523 DEFB108AA8MXU0 73 aa9.74□□□□□ -0.85
SHKBP1-206ENST00000595523 M0QX08 132 aa9.74□□□□□ -0.85
SHKBP1-206ENST00000595523 M0R3H8 397 aa9.74□□□□□ -0.85
SHKBP1-206ENST00000595523 NPPAP01160 153 aa9.74□□□□□ -0.85
SHKBP1-206ENST00000595523 HRGP04196 525 aa9.74□□□□□ -0.85
SHKBP1-206ENST00000595523 THBDP07204 575 aa9.74□□□□□ -0.85
SHKBP1-206ENST00000595523 CD247P20963 164 aa9.74□□□□□ -0.85
SHKBP1-206ENST00000595523 FPR1P21462 350 aa9.74□□□□□ -0.85
SHKBP1-206ENST00000595523 IDUAP35475 653 aa9.74□□□□□ -0.85
SHKBP1-206ENST00000595523 OR3A2P47893 321 aa9.74□□□□□ -0.85
SHKBP1-206ENST00000595523 P2RY4P51582 365 aa9.74□□□□□ -0.85
SHKBP1-206ENST00000595523 SLC16A1P53985 500 aa9.74□□□□□ -0.85
SHKBP1-206ENST00000595523 SLC35A1P78382 337 aa9.74□□□□□ -0.85
SHKBP1-206ENST00000595523 CEACAM7Q14002 265 aa9.74□□□□□ -0.85
SHKBP1-206ENST00000595523 PDK3Q15120 406 aa9.74□□□□□ -0.85
SHKBP1-206ENST00000595523 TSC22D1Q15714 1073 aa9.74□□□□□ -0.85
SHKBP1-206ENST00000595523 NPTX1Q15818 432 aa9.74□□□□□ -0.85
SHKBP1-206ENST00000595523 NRF1Q16656 503 aa9.74□□□□□ -0.85
SHKBP1-206ENST00000595523 MMEL1Q495T6 779 aa9.74□□□□□ -0.85
SHKBP1-206ENST00000595523 BEND4Q6ZU67 534 aa9.74□□□□□ -0.85
SHKBP1-206ENST00000595523 CCDC80Q76M96 950 aa9.74□□□□□ -0.85
SHKBP1-206ENST00000595523 CDH24Q86UP0 819 aa9.74□□□□□ -0.85
SHKBP1-206ENST00000595523 TSPYL5Q86VY4 417 aaPredicted RBP9.74□□□□□ -0.85
SHKBP1-206ENST00000595523 CDC20BQ86Y33 519 aa9.74□□□□□ -0.85
SHKBP1-206ENST00000595523 OR4D11Q8NGI4 311 aa9.74□□□□□ -0.85
SHKBP1-206ENST00000595523 PIGXQ8TBF5 258 aa9.74□□□□□ -0.85
SHKBP1-206ENST00000595523 ZNF583Q96ND8 569 aa9.74□□□□□ -0.85
SHKBP1-206ENST00000595523 ARHGDIGQ99819 225 aa9.74□□□□□ -0.85
SHKBP1-206ENST00000595523 TACO1Q9BSH4 297 aaKnown RBP9.74□□□□□ -0.85
SHKBP1-206ENST00000595523 PTDSS2Q9BVG9 487 aa9.74□□□□□ -0.85
SHKBP1-206ENST00000595523 KLHL4Q9C0H6 718 aa9.74□□□□□ -0.85
SHKBP1-206ENST00000595523 MYLK2Q9H1R3 596 aa9.74□□□□□ -0.85
SHKBP1-206ENST00000595523 GMPR2Q9P2T1 348 aaKnown RBP9.74□□□□□ -0.85
SHKBP1-206ENST00000595523 TESQ9UGI8 421 aaKnown RBP9.74□□□□□ -0.85
SHKBP1-206ENST00000595523 NDRG3Q9UGV2 375 aa9.74□□□□□ -0.85
SHKBP1-206ENST00000595523 PRSS50Q9UI38 385 aa9.74□□□□□ -0.85
SHKBP1-206ENST00000595523 MTORP42345 2549 aa9.73□□□□□ -0.85
SHKBP1-206ENST00000595523 FTCDNL1E5RQL4 147 aa9.73□□□□□ -0.85
SHKBP1-206ENST00000595523 SNX3O60493 162 aa9.73□□□□□ -0.85
SHKBP1-206ENST00000595523 FZD7O75084 574 aa9.73□□□□□ -0.85
SHKBP1-206ENST00000595523 SERPINB7O75635 380 aa9.73□□□□□ -0.85
SHKBP1-206ENST00000595523 AKR7A3O95154 331 aa9.73□□□□□ -0.85
SHKBP1-206ENST00000595523 LGI1O95970 557 aa9.73□□□□□ -0.85
SHKBP1-206ENST00000595523 COX4I1P13073 169 aa9.73□□□□□ -0.85
SHKBP1-206ENST00000595523 PSMB1P20618 241 aaKnown RBP9.73□□□□□ -0.85
SHKBP1-206ENST00000595523 CRYGSP22914 178 aa9.73□□□□□ -0.85
SHKBP1-206ENST00000595523 LOXP28300 417 aaPredicted RBP9.73□□□□□ -0.85
SHKBP1-206ENST00000595523 RGS8P57771 180 aaPredicted RBP9.73□□□□□ -0.85
SHKBP1-206ENST00000595523 SLC17A1Q14916 467 aa9.73□□□□□ -0.85
SHKBP1-206ENST00000595523 POU4F3Q15319 338 aa9.73□□□□□ -0.85
SHKBP1-206ENST00000595523 OR7A5Q15622 319 aa9.73□□□□□ -0.85
SHKBP1-206ENST00000595523 C1orf140Q5VVS0 124 aa9.73□□□□□ -0.85
SHKBP1-206ENST00000595523 PAQR6Q6TCH4 344 aa9.73□□□□□ -0.85
SHKBP1-206ENST00000595523 GALNT5Q7Z7M9 940 aa9.73□□□□□ -0.85
SHKBP1-206ENST00000595523 STK32CQ86UX6 486 aa9.73□□□□□ -0.85
SHKBP1-206ENST00000595523 CXorf67Q86X51 503 aaPredicted RBP9.73□□□□□ -0.85
SHKBP1-206ENST00000595523 RBM45Q8IUH3 476 aaKnown RBP9.73□□□□□ -0.85
SHKBP1-206ENST00000595523 SLC30A8Q8IWU4 369 aa9.73□□□□□ -0.85
SHKBP1-206ENST00000595523 TMEM99Q8N816 258 aa9.73□□□□□ -0.85
SHKBP1-206ENST00000595523 BHLHE22Q8NFJ8 381 aaPredicted RBP9.73□□□□□ -0.85
SHKBP1-206ENST00000595523 OR52E4Q8NGH9 312 aa9.73□□□□□ -0.85
SHKBP1-206ENST00000595523 OR6T1Q8NGN1 323 aa9.73□□□□□ -0.85
SHKBP1-206ENST00000595523 RP9Q8TA86 221 aaKnown RBP9.73□□□□□ -0.85
SHKBP1-206ENST00000595523 STK35Q8TDR2 534 aa9.73□□□□□ -0.85
SHKBP1-206ENST00000595523 ZHX1-C8orf76Q96EF9 292 aa9.73□□□□□ -0.85
SHKBP1-206ENST00000595523 KTI12Q96EK9 354 aaPredicted RBP9.73□□□□□ -0.85
SHKBP1-206ENST00000595523 MED18Q9BUE0 208 aa9.73□□□□□ -0.85
SHKBP1-206ENST00000595523 FAM107BQ9H098 131 aa9.73□□□□□ -0.85
SHKBP1-206ENST00000595523 PLEKHF2Q9H8W4 249 aa9.73□□□□□ -0.85
SHKBP1-206ENST00000595523 C12orf10Q9HB07 376 aa9.73□□□□□ -0.85
SHKBP1-206ENST00000595523 C6orf203Q9P0P8 240 aaPredicted RBP9.73□□□□□ -0.85
SHKBP1-206ENST00000595523 FLVCR1Q9Y5Y0 555 aa9.73□□□□□ -0.85
SHKBP1-206ENST00000595523 A0A0B4J2E0 115 aa9.72□□□□□ -0.85
SHKBP1-206ENST00000595523 A0A1B0GX12 115 aa9.72□□□□□ -0.85
SHKBP1-206ENST00000595523 AQP7P3A6NL99 342 aa9.72□□□□□ -0.85
SHKBP1-206ENST00000595523 CCT8L1PA6NM43 557 aa9.72□□□□□ -0.85
SHKBP1-206ENST00000595523 EIF1BO60739 113 aaKnown RBP9.72□□□□□ -0.85
SHKBP1-206ENST00000595523 CCDC22O60826 627 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms