RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 A0A087WUJ7 227 aa22.99■■□□□ 1.27
TRIM28-204ENST00000594806 ZC3H12DA2A288 527 aaKnown RBP22.99■■□□□ 1.27
TRIM28-204ENST00000594806 EEF1E1-BLOC1S5C9J1V9 151 aa22.99■■□□□ 1.27
TRIM28-204ENST00000594806 SMAD9O15198 467 aaKnown RBP22.99■■□□□ 1.27
TRIM28-204ENST00000594806 EEF1E1O43324 174 aaKnown RBP22.99■■□□□ 1.27
TRIM28-204ENST00000594806 IMPDH2P12268 514 aa22.99■■□□□ 1.27
TRIM28-204ENST00000594806 H3F3AP84243 136 aa22.99■■□□□ 1.27
TRIM28-204ENST00000594806 BNIP2Q12982 314 aa22.99■■□□□ 1.27
TRIM28-204ENST00000594806 NPTX1Q15818 432 aa22.99■■□□□ 1.27
TRIM28-204ENST00000594806 ENTPD8Q5MY95 495 aa22.99■■□□□ 1.27
TRIM28-204ENST00000594806 TMEM201Q5SNT2 666 aa22.99■■□□□ 1.27
TRIM28-204ENST00000594806 C1orf140Q5VVS0 124 aa22.99■■□□□ 1.27
TRIM28-204ENST00000594806 CBLL1Q75N03 491 aa22.99■■□□□ 1.27
TRIM28-204ENST00000594806 CARM1Q86X55 608 aa22.99■■□□□ 1.27
TRIM28-204ENST00000594806 DEFB107AQ8IZN7 70 aa22.99■■□□□ 1.27
TRIM28-204ENST00000594806 ARHGAP24Q8N264 748 aa22.99■■□□□ 1.27
TRIM28-204ENST00000594806 VANGL1Q8TAA9 524 aaPredicted RBP22.99■■□□□ 1.27
TRIM28-204ENST00000594806 PIGXQ8TBF5 258 aa22.99■■□□□ 1.27
TRIM28-204ENST00000594806 ABHD3Q8WU67 409 aa22.99■■□□□ 1.27
TRIM28-204ENST00000594806 CDRT15Q96T59 188 aa22.99■■□□□ 1.27
TRIM28-204ENST00000594806 PRR14Q9BWN1 585 aa22.99■■□□□ 1.27
TRIM28-204ENST00000594806 PLSCR4Q9NRQ2 329 aa22.99■■□□□ 1.27
TRIM28-204ENST00000594806 KLHL13Q9P2N7 655 aa22.99■■□□□ 1.27
TRIM28-204ENST00000594806 GMPR2Q9P2T1 348 aaKnown RBP22.99■■□□□ 1.27
TRIM28-204ENST00000594806 PROCRQ9UNN8 238 aa22.99■■□□□ 1.27
TRIM28-204ENST00000594806 ASH1LQ9NR48 2969 aaKnown RBP22.98■■□□□ 1.27
TRIM28-204ENST00000594806 TRAPPC13A5PLN9 417 aa22.98■■□□□ 1.27
TRIM28-204ENST00000594806 LIPT2A6NK58 231 aa22.98■■□□□ 1.27
TRIM28-204ENST00000594806 A8MXE2 369 aa22.98■■□□□ 1.27
TRIM28-204ENST00000594806 OR2T1O43869 369 aa22.98■■□□□ 1.27
TRIM28-204ENST00000594806 AHSA1O95433 338 aa22.98■■□□□ 1.27
TRIM28-204ENST00000594806 CGAP01215 116 aa22.98■■□□□ 1.27
TRIM28-204ENST00000594806 YES1P07947 543 aa22.98■■□□□ 1.27
TRIM28-204ENST00000594806 SIRPAP78324 504 aa22.98■■□□□ 1.27
TRIM28-204ENST00000594806 RASGEF1BQ0VAM2 473 aa22.98■■□□□ 1.27
TRIM28-204ENST00000594806 FXNQ16595 210 aa22.98■■□□□ 1.27
TRIM28-204ENST00000594806 VWA1Q6PCB0 445 aa22.98■■□□□ 1.27
TRIM28-204ENST00000594806 PAQR6Q6TCH4 344 aa22.98■■□□□ 1.27
TRIM28-204ENST00000594806 BTLAQ7Z6A9 289 aa22.98■■□□□ 1.27
TRIM28-204ENST00000594806 OR4D11Q8NGI4 311 aa22.98■■□□□ 1.27
TRIM28-204ENST00000594806 MFSD8Q8NHS3 518 aa22.98■■□□□ 1.27
TRIM28-204ENST00000594806 FAM162AQ96A26 154 aa22.98■■□□□ 1.27
TRIM28-204ENST00000594806 TPD52L3Q96J77 140 aa22.98■■□□□ 1.27
TRIM28-204ENST00000594806 EPYCQ99645 322 aa22.98■■□□□ 1.27
TRIM28-204ENST00000594806 NPDC1Q9NQX5 325 aaPredicted RBP22.98■■□□□ 1.27
TRIM28-204ENST00000594806 CD300AQ9UGN4 299 aa22.98■■□□□ 1.27
TRIM28-204ENST00000594806 RPS6KA6Q9UK32 745 aa22.98■■□□□ 1.27
TRIM28-204ENST00000594806 ZNF724A8MTY0 619 aa22.97■■□□□ 1.27
TRIM28-204ENST00000594806 C19orf84I3L1E1 186 aa22.97■■□□□ 1.27
TRIM28-204ENST00000594806 CHP2O43745 196 aa22.97■■□□□ 1.27
TRIM28-204ENST00000594806 IGFBP2P18065 325 aa22.97■■□□□ 1.27
TRIM28-204ENST00000594806 FPR1P21462 350 aa22.97■■□□□ 1.27
TRIM28-204ENST00000594806 AGTR1P30556 359 aa22.97■■□□□ 1.27
TRIM28-204ENST00000594806 CPOXP36551 454 aa22.97■■□□□ 1.27
TRIM28-204ENST00000594806 CDH12P55289 794 aa22.97■■□□□ 1.27
TRIM28-204ENST00000594806 ABLIM2Q6H8Q1 611 aa22.97■■□□□ 1.27
TRIM28-204ENST00000594806 GLYATQ6IB77 296 aa22.97■■□□□ 1.27
TRIM28-204ENST00000594806 KIF18BQ86Y91 864 aa22.97■■□□□ 1.27
TRIM28-204ENST00000594806 OR6S1Q8NH40 331 aa22.97■■□□□ 1.27
TRIM28-204ENST00000594806 ADAMTS16Q8TE57 1224 aa22.97■■□□□ 1.27
TRIM28-204ENST00000594806 MPP4Q96JB8 637 aa22.97■■□□□ 1.27
TRIM28-204ENST00000594806 PSD2Q9BQI7 771 aa22.97■■□□□ 1.27
TRIM28-204ENST00000594806 TMEM43Q9BTV4 400 aa22.97■■□□□ 1.27
TRIM28-204ENST00000594806 C1orf21Q9H246 121 aa22.97■■□□□ 1.27
TRIM28-204ENST00000594806 GORASP2Q9H8Y8 452 aa22.97■■□□□ 1.27
TRIM28-204ENST00000594806 EMC3Q9P0I2 261 aa22.97■■□□□ 1.27
TRIM28-204ENST00000594806 PKDREJQ9NTG1 2253 aa22.96■■□□□ 1.27
TRIM28-204ENST00000594806 IGKV3D-15A0A087WSY6 115 aa22.96■■□□□ 1.27
TRIM28-204ENST00000594806 IGHV3-15A0A0B4J1V0 119 aa22.96■■□□□ 1.27
TRIM28-204ENST00000594806 HNRNPRO43390 633 aaKnown RBP22.96■■□□□ 1.27
TRIM28-204ENST00000594806 T-ENOLP0DO92 83 aa22.96■■□□□ 1.27
TRIM28-204ENST00000594806 COX6B1P14854 86 aa22.96■■□□□ 1.27
TRIM28-204ENST00000594806 COL8A1P27658 744 aa22.96■■□□□ 1.27
TRIM28-204ENST00000594806 EGR4Q05215 589 aa22.96■■□□□ 1.27
TRIM28-204ENST00000594806 CEACAM7Q14002 265 aa22.96■■□□□ 1.27
TRIM28-204ENST00000594806 RBM45Q8IUH3 476 aaKnown RBP22.96■■□□□ 1.27
TRIM28-204ENST00000594806 RBM15BQ8NDT2 890 aaKnown RBP22.96■■□□□ 1.27
TRIM28-204ENST00000594806 RBM24Q9BX46 236 aaKnown RBP22.96■■□□□ 1.27
TRIM28-204ENST00000594806 FANCFQ9NPI8 374 aa22.96■■□□□ 1.27
TRIM28-204ENST00000594806 MAGEL2Q9UJ55 1249 aa22.96■■□□□ 1.27
TRIM28-204ENST00000594806 CLEC4AQ9UMR7 237 aa22.96■■□□□ 1.27
TRIM28-204ENST00000594806 CPSF4LA6NMK7 179 aaKnown RBP22.95■■□□□ 1.26
TRIM28-204ENST00000594806 GPR171O14626 319 aa22.95■■□□□ 1.26
TRIM28-204ENST00000594806 FZD7O75084 574 aa22.95■■□□□ 1.26
TRIM28-204ENST00000594806 SMNDC1O75940 238 aaKnown RBP eCLIP22.95■■□□□ 1.261e-13■□□□□ 8.8
TRIM28-204ENST00000594806 SERPINA1P01009 418 aa22.95■■□□□ 1.26
TRIM28-204ENST00000594806 IFNA8P32881 189 aa22.95■■□□□ 1.26
TRIM28-204ENST00000594806 SLC16A1P53985 500 aa22.95■■□□□ 1.26
TRIM28-204ENST00000594806 SORDQ00796 357 aa22.95■■□□□ 1.26
TRIM28-204ENST00000594806 MFSD13AQ14CX5 517 aa22.95■■□□□ 1.26
TRIM28-204ENST00000594806 OR7A5Q15622 319 aa22.95■■□□□ 1.26
TRIM28-204ENST00000594806 FAM69AQ5T7M9 428 aa22.95■■□□□ 1.26
TRIM28-204ENST00000594806 LINC00114Q6XXX2 140 aa22.95■■□□□ 1.26
TRIM28-204ENST00000594806 LUZP2Q86TE4 346 aa22.95■■□□□ 1.26
TRIM28-204ENST00000594806 STK32CQ86UX6 486 aa22.95■■□□□ 1.26
TRIM28-204ENST00000594806 TUSC5Q8IXB3 177 aa22.95■■□□□ 1.26
TRIM28-204ENST00000594806 DMRTC2Q8IXT2 367 aaPredicted RBP22.95■■□□□ 1.26
TRIM28-204ENST00000594806 RNF217Q8TC41 542 aa22.95■■□□□ 1.26
TRIM28-204ENST00000594806 GEMIN6Q8WXD5 167 aaKnown RBP22.95■■□□□ 1.26
TRIM28-204ENST00000594806 ELOVL5Q9NYP7 299 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms