RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 ELOVL7A1L3X0 281 aa17.74■□□□□ 0.43
LSM4-203ENST00000593829 AGAP5A6NIR3 686 aa17.74■□□□□ 0.43
LSM4-203ENST00000593829 ZNF264O43296 627 aa17.74■□□□□ 0.43
LSM4-203ENST00000593829 EIF4E2O60573 245 aaKnown RBP17.74■□□□□ 0.43
LSM4-203ENST00000593829 INMTO95050 263 aa17.74■□□□□ 0.43
LSM4-203ENST00000593829 P2RX1P51575 399 aa17.74■□□□□ 0.43
LSM4-203ENST00000593829 GFRA1P56159 465 aa17.74■□□□□ 0.43
LSM4-203ENST00000593829 CDK5R2Q13319 367 aa17.74■□□□□ 0.43
LSM4-203ENST00000593829 FGFBP1Q14512 234 aa17.74■□□□□ 0.43
LSM4-203ENST00000593829 GCNT6Q5T4J0 391 aa17.74■□□□□ 0.43
LSM4-203ENST00000593829 RAET1LQ5VY80 246 aa17.74■□□□□ 0.43
LSM4-203ENST00000593829 CBLN3Q6UW01 205 aa17.74■□□□□ 0.43
LSM4-203ENST00000593829 ENPP6Q6UWR7 440 aa17.74■□□□□ 0.43
LSM4-203ENST00000593829 ARSKQ6UWY0 536 aa17.74■□□□□ 0.43
LSM4-203ENST00000593829 C3P1Q6ZMU1 363 aa17.74■□□□□ 0.43
LSM4-203ENST00000593829 FAM86B1Q8N7N1 296 aa17.74■□□□□ 0.43
LSM4-203ENST00000593829 OR6Q1Q8NGQ2 317 aa17.74■□□□□ 0.43
LSM4-203ENST00000593829 MAL2Q969L2 176 aa17.74■□□□□ 0.43
LSM4-203ENST00000593829 TMEM19Q96HH6 336 aa17.74■□□□□ 0.43
LSM4-203ENST00000593829 TREX2Q9BQ50 279 aaPredicted RBP17.74■□□□□ 0.43
LSM4-203ENST00000593829 DGCR6LQ9BY27 220 aa17.74■□□□□ 0.43
LSM4-203ENST00000593829 DUSP21Q9H596 190 aa17.74■□□□□ 0.43
LSM4-203ENST00000593829 DCAF13Q9NV06 445 aaKnown RBP17.74■□□□□ 0.43
LSM4-203ENST00000593829 PAK1IP1Q9NWT1 392 aaPredicted RBP17.74■□□□□ 0.43
LSM4-203ENST00000593829 FREM3P0C091 2139 aa17.73■□□□□ 0.43
LSM4-203ENST00000593829 FIGNL2A6NMB9 653 aa17.73■□□□□ 0.43
LSM4-203ENST00000593829 C5orf58C9J3I9 102 aa17.73■□□□□ 0.43
LSM4-203ENST00000593829 FAM47E-STBD1D6RA91 191 aa17.73■□□□□ 0.43
LSM4-203ENST00000593829 OIP5O43482 229 aa17.73■□□□□ 0.43
LSM4-203ENST00000593829 CSTAP01040 98 aa17.73■□□□□ 0.43
LSM4-203ENST00000593829 CHMP24386 653 aa17.73■□□□□ 0.43
LSM4-203ENST00000593829 ZNF41P51814 821 aaPredicted RBP17.73■□□□□ 0.43
LSM4-203ENST00000593829 SUMO3P55854 103 aaPredicted RBP17.73■□□□□ 0.43
LSM4-203ENST00000593829 MVKQ03426 396 aa17.73■□□□□ 0.43
LSM4-203ENST00000593829 SYT6Q5T7P8 510 aaPredicted RBP17.73■□□□□ 0.43
LSM4-203ENST00000593829 ZNF585AQ6P3V2 769 aa17.73■□□□□ 0.43
LSM4-203ENST00000593829 ZBTB46Q86UZ6 589 aa17.73■□□□□ 0.43
LSM4-203ENST00000593829 LACC1Q8IV20 430 aa17.73■□□□□ 0.43
LSM4-203ENST00000593829 C10orf111Q8N326 155 aa17.73■□□□□ 0.43
LSM4-203ENST00000593829 FIG4Q92562 907 aa17.73■□□□□ 0.43
LSM4-203ENST00000593829 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.73■□□□□ 0.43
LSM4-203ENST00000593829 TMEFF2Q9UIK5 374 aaPredicted RBP17.73■□□□□ 0.43
LSM4-203ENST00000593829 ICAM5Q9UMF0 924 aa17.73■□□□□ 0.43
LSM4-203ENST00000593829 VDAC3Q9Y277 283 aa17.73■□□□□ 0.43
LSM4-203ENST00000593829 SLC35A3Q9Y2D2 325 aa17.73■□□□□ 0.43
LSM4-203ENST00000593829 MEMO1Q9Y316 297 aa17.73■□□□□ 0.43
LSM4-203ENST00000593829 A0A0G2JPF8 293 aa17.72■□□□□ 0.43
LSM4-203ENST00000593829 FAM220BPB1ANY3 271 aa17.72■□□□□ 0.43
LSM4-203ENST00000593829 HNRNPCL2B2RXH8 293 aa17.72■□□□□ 0.43
LSM4-203ENST00000593829 HNRNPCL3B7ZW38 293 aa17.72■□□□□ 0.43
LSM4-203ENST00000593829 E9PLN8 166 aa17.72■□□□□ 0.43
LSM4-203ENST00000593829 CXCR6O00574 342 aa17.72■□□□□ 0.43
LSM4-203ENST00000593829 E2F6O75461 281 aa17.72■□□□□ 0.43
LSM4-203ENST00000593829 PRKD3O94806 890 aa17.72■□□□□ 0.43
LSM4-203ENST00000593829 DBIP07108 87 aaKnown RBP17.72■□□□□ 0.43
LSM4-203ENST00000593829 HNRNPCL4P0DMR1 293 aa17.72■□□□□ 0.43
LSM4-203ENST00000593829 ARAFP10398 606 aa17.72■□□□□ 0.43
LSM4-203ENST00000593829 B3GALT5-AS1P59052 145 aa17.72■□□□□ 0.43
LSM4-203ENST00000593829 KCNJ10P78508 379 aa17.72■□□□□ 0.43
LSM4-203ENST00000593829 EMX1Q04741 257 aaPredicted RBP17.72■□□□□ 0.43
LSM4-203ENST00000593829 NDUFAF6Q330K2 333 aa17.72■□□□□ 0.43
LSM4-203ENST00000593829 PRAMEF8Q5VWM4 474 aa17.72■□□□□ 0.43
LSM4-203ENST00000593829 PRAMEF7Q5VXH5 474 aa17.72■□□□□ 0.43
LSM4-203ENST00000593829 MTFR2Q6P444 385 aa17.72■□□□□ 0.43
LSM4-203ENST00000593829 PIWIL3Q7Z3Z3 882 aaKnown RBP17.72■□□□□ 0.43
LSM4-203ENST00000593829 BTLAQ7Z6A9 289 aa17.72■□□□□ 0.43
LSM4-203ENST00000593829 HMGN2P46Q86SG4 172 aa17.72■□□□□ 0.43
LSM4-203ENST00000593829 PEX5LQ8IYB4 626 aa17.72■□□□□ 0.43
LSM4-203ENST00000593829 PM20D2Q8IYS1 436 aa17.72■□□□□ 0.43
LSM4-203ENST00000593829 MICU2Q8IYU8 434 aa17.72■□□□□ 0.43
LSM4-203ENST00000593829 CADM3Q8N126 398 aa17.72■□□□□ 0.43
LSM4-203ENST00000593829 DYNC2LI1Q8TCX1 351 aa17.72■□□□□ 0.43
LSM4-203ENST00000593829 RORBQ92753 470 aa17.72■□□□□ 0.43
LSM4-203ENST00000593829 VKORC1Q9BQB6 163 aa17.72■□□□□ 0.43
LSM4-203ENST00000593829 PIGQQ9BRB3 760 aa17.72■□□□□ 0.43
LSM4-203ENST00000593829 LAT2Q9GZY6 243 aa17.72■□□□□ 0.43
LSM4-203ENST00000593829 ALKBH4Q9NXW9 302 aa17.72■□□□□ 0.43
LSM4-203ENST00000593829 TPRKBQ9Y3C4 175 aa17.72■□□□□ 0.43
LSM4-203ENST00000593829 ORC6Q9Y5N6 252 aa17.72■□□□□ 0.43
LSM4-203ENST00000593829 HIVEP3Q5T1R4 2406 aa17.72■□□□□ 0.43
LSM4-203ENST00000593829 DSPPQ9NZW4 1301 aa17.72■□□□□ 0.43
LSM4-203ENST00000593829 GNGT2O14610 69 aa17.72■□□□□ 0.43
LSM4-203ENST00000593829 WDR1O75083 606 aa17.72■□□□□ 0.43
LSM4-203ENST00000593829 NUDT14O95848 222 aa17.72■□□□□ 0.43
LSM4-203ENST00000593829 RPS4Y1P22090 263 aaKnown RBP17.72■□□□□ 0.43
LSM4-203ENST00000593829 KEAP1Q14145 624 aa17.72■□□□□ 0.43
LSM4-203ENST00000593829 DCST1Q5T197 706 aa17.72■□□□□ 0.43
LSM4-203ENST00000593829 C1QTNF12Q5T7M4 302 aa17.72■□□□□ 0.43
LSM4-203ENST00000593829 PLEKHG7Q6ZR37 379 aa17.72■□□□□ 0.43
LSM4-203ENST00000593829 CALHM3Q86XJ0 350 aa17.72■□□□□ 0.43
LSM4-203ENST00000593829 TOR1AIP2Q8NFQ8 470 aa17.72■□□□□ 0.43
LSM4-203ENST00000593829 ZBTB8AQ96BR9 441 aa17.72■□□□□ 0.43
LSM4-203ENST00000593829 ZNF300Q96RE9 604 aaPredicted RBP17.72■□□□□ 0.43
LSM4-203ENST00000593829 PRDM14Q9GZV8 571 aa17.72■□□□□ 0.43
LSM4-203ENST00000593829 TMEM38AQ9H6F2 299 aa17.72■□□□□ 0.43
LSM4-203ENST00000593829 BCL2L10Q9HD36 194 aa17.72■□□□□ 0.43
LSM4-203ENST00000593829 MED17Q9NVC6 651 aa17.72■□□□□ 0.43
LSM4-203ENST00000593829 LINC01387J3KSC0 135 aa17.71■□□□□ 0.43
LSM4-203ENST00000593829 CYP7B1O75881 506 aa17.71■□□□□ 0.43
LSM4-203ENST00000593829 HOXD4P09016 255 aaPredicted RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms