RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 GGT1P19440 569 aa9.17□□□□□ -0.94
VPS4B-207ENST00000591519 NCF2P19878 526 aaPredicted RBP9.17□□□□□ -0.94
VPS4B-207ENST00000591519 NTF4P34130 210 aa9.17□□□□□ -0.94
VPS4B-207ENST00000591519 CCR4P51679 360 aa9.17□□□□□ -0.94
VPS4B-207ENST00000591519 POLR2JP52435 117 aaKnown RBP9.17□□□□□ -0.94
VPS4B-207ENST00000591519 MAP2K6P52564 334 aa9.17□□□□□ -0.94
VPS4B-207ENST00000591519 SLC16A1P53985 500 aa9.17□□□□□ -0.94
VPS4B-207ENST00000591519 KCNJ10P78508 379 aa9.17□□□□□ -0.94
VPS4B-207ENST00000591519 H3F3AP84243 136 aa9.17□□□□□ -0.94
VPS4B-207ENST00000591519 VEZF1Q14119 521 aa9.17□□□□□ -0.94
VPS4B-207ENST00000591519 DPY19L1Q2PZI1 675 aa9.17□□□□□ -0.94
VPS4B-207ENST00000591519 C1QTNF12Q5T7M4 302 aa9.17□□□□□ -0.94
VPS4B-207ENST00000591519 ATAD3BQ5T9A4 648 aa9.17□□□□□ -0.94
VPS4B-207ENST00000591519 SAXO2Q658L1 398 aa9.17□□□□□ -0.94
VPS4B-207ENST00000591519 ABLIM2Q6H8Q1 611 aa9.17□□□□□ -0.94
VPS4B-207ENST00000591519 TNFAIP8L2Q6P589 184 aaPredicted RBP9.17□□□□□ -0.94
VPS4B-207ENST00000591519 ZNF621Q6ZSS3 439 aa9.17□□□□□ -0.94
VPS4B-207ENST00000591519 C16orf62Q7Z3J2 963 aa9.17□□□□□ -0.94
VPS4B-207ENST00000591519 GRINAQ7Z429 371 aa9.17□□□□□ -0.94
VPS4B-207ENST00000591519 ADGRG3Q86Y34 549 aa9.17□□□□□ -0.94
VPS4B-207ENST00000591519 ZNF100Q8IYN0 542 aa9.17□□□□□ -0.94
VPS4B-207ENST00000591519 ZNF619Q8N2I2 560 aa9.17□□□□□ -0.94
VPS4B-207ENST00000591519 KBTBD8Q8NFY9 601 aa9.17□□□□□ -0.94
VPS4B-207ENST00000591519 SPATA3Q8NHX4 192 aa9.17□□□□□ -0.94
VPS4B-207ENST00000591519 PNPT1Q8TCS8 783 aaKnown RBP9.17□□□□□ -0.94
VPS4B-207ENST00000591519 XAGE5Q8WWM1 108 aa9.17□□□□□ -0.94
VPS4B-207ENST00000591519 PMM1Q92871 262 aa9.17□□□□□ -0.94
VPS4B-207ENST00000591519 VPS33AQ96AX1 596 aa9.17□□□□□ -0.94
VPS4B-207ENST00000591519 ROPN1LQ96C74 230 aa9.17□□□□□ -0.94
VPS4B-207ENST00000591519 NEURL3Q96EH8 262 aa9.17□□□□□ -0.94
VPS4B-207ENST00000591519 MUS81Q96NY9 551 aa9.17□□□□□ -0.94
VPS4B-207ENST00000591519 PANX1Q96RD7 426 aa9.17□□□□□ -0.94
VPS4B-207ENST00000591519 CCDC28BQ9BUN5 200 aa9.17□□□□□ -0.94
VPS4B-207ENST00000591519 EXOSC3Q9NQT5 275 aaKnown RBP9.17□□□□□ -0.94
VPS4B-207ENST00000591519 ZIM2Q9NZV7 527 aa9.17□□□□□ -0.94
VPS4B-207ENST00000591519 EMC3Q9P0I2 261 aa9.17□□□□□ -0.94
VPS4B-207ENST00000591519 CHRNA9Q9UGM1 479 aa9.17□□□□□ -0.94
VPS4B-207ENST00000591519 SPIN1Q9Y657 262 aaPredicted RBP9.17□□□□□ -0.94
VPS4B-207ENST00000591519 RTTNQ86VV8 2226 aa9.17□□□□□ -0.94
VPS4B-207ENST00000591519 CHD3Q12873 2000 aaKnown RBP9.17□□□□□ -0.94
VPS4B-207ENST00000591519 ALPK2Q86TB3 2170 aa9.16□□□□□ -0.94
VPS4B-207ENST00000591519 PRAMEF27A3QJZ7 478 aa9.16□□□□□ -0.94
VPS4B-207ENST00000591519 CCDC154A6NI56 674 aa9.16□□□□□ -0.94
VPS4B-207ENST00000591519 TLX2O43763 284 aaPredicted RBP9.16□□□□□ -0.94
VPS4B-207ENST00000591519 BCAS1O75363 584 aaPredicted RBP9.16□□□□□ -0.94
VPS4B-207ENST00000591519 CYP7B1O75881 506 aa9.16□□□□□ -0.94
VPS4B-207ENST00000591519 ANP32DO95626 131 aa9.16□□□□□ -0.94
VPS4B-207ENST00000591519 IGHV4-39P01824 125 aa9.16□□□□□ -0.94
VPS4B-207ENST00000591519 FAM157BP0CG42 384 aa9.16□□□□□ -0.94
VPS4B-207ENST00000591519 ACVR1BP36896 505 aa9.16□□□□□ -0.94
VPS4B-207ENST00000591519 CDKN1AP38936 164 aa9.16□□□□□ -0.94
VPS4B-207ENST00000591519 TXNL4AP83876 142 aaKnown RBP9.16□□□□□ -0.94
VPS4B-207ENST00000591519 PLAURQ03405 335 aa9.16□□□□□ -0.94
VPS4B-207ENST00000591519 FUT5Q11128 374 aa9.16□□□□□ -0.94
VPS4B-207ENST00000591519 GTDC1Q4AE62 458 aa9.16□□□□□ -0.94
VPS4B-207ENST00000591519 AGKQ53H12 422 aa9.16□□□□□ -0.94
VPS4B-207ENST00000591519 C6orf10Q5SRN2 563 aa9.16□□□□□ -0.94
VPS4B-207ENST00000591519 FRRS1Q6ZNA5 592 aa9.16□□□□□ -0.94
VPS4B-207ENST00000591519 HMGN2P46Q86SG4 172 aa9.16□□□□□ -0.94
VPS4B-207ENST00000591519 CMIPQ8IY22 773 aa9.16□□□□□ -0.94
VPS4B-207ENST00000591519 GLB1L3Q8NCI6 653 aaPredicted RBP9.16□□□□□ -0.94
VPS4B-207ENST00000591519 RAB8BQ92930 207 aa9.16□□□□□ -0.94
VPS4B-207ENST00000591519 ZHX1-C8orf76Q96EF9 292 aa9.16□□□□□ -0.94
VPS4B-207ENST00000591519 ARL5BQ96KC2 179 aa9.16□□□□□ -0.94
VPS4B-207ENST00000591519 CCDC115Q96NT0 180 aa9.16□□□□□ -0.94
VPS4B-207ENST00000591519 TMEM120AQ9BXJ8 343 aa9.16□□□□□ -0.94
VPS4B-207ENST00000591519 BARX1Q9HBU1 254 aaPredicted RBP9.16□□□□□ -0.94
VPS4B-207ENST00000591519 CTPS2Q9NRF8 586 aa9.16□□□□□ -0.94
VPS4B-207ENST00000591519 SDR39U1Q9NRG7 319 aaPredicted RBP9.16□□□□□ -0.94
VPS4B-207ENST00000591519 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.16□□□□□ -0.94
VPS4B-207ENST00000591519 FAIMQ9NVQ4 179 aa9.16□□□□□ -0.94
VPS4B-207ENST00000591519 NPAP1Q9NZP6 1156 aa9.16□□□□□ -0.94
VPS4B-207ENST00000591519 CCDC167Q9P0B6 97 aa9.16□□□□□ -0.94
VPS4B-207ENST00000591519 BTNL2Q9UIR0 455 aa9.16□□□□□ -0.94
VPS4B-207ENST00000591519 MGAT4BQ9UQ53 548 aa9.16□□□□□ -0.94
VPS4B-207ENST00000591519 NOSIPQ9Y314 301 aaKnown RBP9.16□□□□□ -0.94
VPS4B-207ENST00000591519 SLC25A15Q9Y619 301 aa9.16□□□□□ -0.94
VPS4B-207ENST00000591519 CR1P17927 2039 aa9.15□□□□□ -0.94
VPS4B-207ENST00000591519 SONP18583 2426 aaKnown RBP9.15□□□□□ -0.94
VPS4B-207ENST00000591519 PLCE1Q9P212 2302 aa9.15□□□□□ -0.94
VPS4B-207ENST00000591519 COL6A5A8TX70 2615 aa9.15□□□□□ -0.94
VPS4B-207ENST00000591519 FAM234BA2RU67 622 aa9.15□□□□□ -0.94
VPS4B-207ENST00000591519 AGAP5A6NIR3 686 aa9.15□□□□□ -0.94
VPS4B-207ENST00000591519 PDLIM1O00151 329 aa9.15□□□□□ -0.94
VPS4B-207ENST00000591519 FAAHO00519 579 aa9.15□□□□□ -0.94
VPS4B-207ENST00000591519 RFXANKO14593 260 aa9.15□□□□□ -0.94
VPS4B-207ENST00000591519 ABCD4O14678 606 aa9.15□□□□□ -0.94
VPS4B-207ENST00000591519 ZNF208O43345 1280 aa9.15□□□□□ -0.94
VPS4B-207ENST00000591519 ATP8B1O43520 1251 aa9.15□□□□□ -0.94
VPS4B-207ENST00000591519 ADAM11O75078 769 aa9.15□□□□□ -0.94
VPS4B-207ENST00000591519 NDUFS7O75251 213 aa9.15□□□□□ -0.94
VPS4B-207ENST00000591519 IL6P05231 212 aa9.15□□□□□ -0.94
VPS4B-207ENST00000591519 TROVE2P10155 538 aaKnown RBP eCLIP9.15□□□□□ -0.94
VPS4B-207ENST00000591519 TFPIP10646 304 aa9.15□□□□□ -0.94
VPS4B-207ENST00000591519 PTAFRP25105 342 aa9.15□□□□□ -0.94
VPS4B-207ENST00000591519 HTR3AP46098 478 aa9.15□□□□□ -0.94
VPS4B-207ENST00000591519 CHRNEQ04844 493 aa9.15□□□□□ -0.94
VPS4B-207ENST00000591519 DMTNQ08495 405 aa9.15□□□□□ -0.94
VPS4B-207ENST00000591519 STK11Q15831 433 aa9.15□□□□□ -0.94
VPS4B-207ENST00000591519 NRF1Q16656 503 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms