RNA–Protein interactions for RNA: ENST00000591055.5

CIRBP-230, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 928 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-230ENST00000591055 ANXA11P50995 505 aaKnown RBP13.8□□□□□ -0.2
CIRBP-230ENST00000591055 MAP2K6P52564 334 aa13.8□□□□□ -0.2
CIRBP-230ENST00000591055 VLDLRP98155 873 aa13.8□□□□□ -0.2
CIRBP-230ENST00000591055 CHRNB3Q05901 458 aa13.8□□□□□ -0.2
CIRBP-230ENST00000591055 GNA13Q14344 377 aa13.8□□□□□ -0.2
CIRBP-230ENST00000591055 SLC17A1Q14916 467 aa13.8□□□□□ -0.2
CIRBP-230ENST00000591055 PHC2Q8IXK0 858 aa13.8□□□□□ -0.2
CIRBP-230ENST00000591055 KIRREL3Q8IZU9 778 aa13.8□□□□□ -0.2
CIRBP-230ENST00000591055 TRIML2Q8N7C3 387 aa13.8□□□□□ -0.2
CIRBP-230ENST00000591055 AENQ8WTP8 325 aaKnown RBP13.8□□□□□ -0.2
CIRBP-230ENST00000591055 WDR60Q8WVS4 1066 aa13.8□□□□□ -0.2
CIRBP-230ENST00000591055 TMEM158Q8WZ71 300 aa13.8□□□□□ -0.2
CIRBP-230ENST00000591055 FAM168AQ92567 244 aa13.8□□□□□ -0.2
CIRBP-230ENST00000591055 TRIM44Q96DX7 344 aaPredicted RBP13.8□□□□□ -0.2
CIRBP-230ENST00000591055 SORT1Q99523 831 aa13.8□□□□□ -0.2
CIRBP-230ENST00000591055 TMEM109Q9BVC6 243 aa13.8□□□□□ -0.2
CIRBP-230ENST00000591055 NUF2Q9BZD4 464 aa13.8□□□□□ -0.2
CIRBP-230ENST00000591055 C20orf27Q9GZN8 174 aa13.8□□□□□ -0.2
CIRBP-230ENST00000591055 SLC38A1Q9H2H9 487 aa13.8□□□□□ -0.2
CIRBP-230ENST00000591055 CDC42EP3Q9UKI2 254 aa13.8□□□□□ -0.2
CIRBP-230ENST00000591055 PMF1-BGLAPU3KQ54 211 aa13.8□□□□□ -0.2
CIRBP-230ENST00000591055 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.8□□□□□ -0.21e-14■■■■□ 24.1
CIRBP-230ENST00000591055 ARFGEF3Q5TH69 2177 aa13.79□□□□□ -0.2
CIRBP-230ENST00000591055 CFAP73A6NFT4 308 aa13.79□□□□□ -0.2
CIRBP-230ENST00000591055 CCDC154A6NI56 674 aa13.79□□□□□ -0.2
CIRBP-230ENST00000591055 FAAHO00519 579 aa13.79□□□□□ -0.2
CIRBP-230ENST00000591055 CHRM4P08173 479 aa13.79□□□□□ -0.2
CIRBP-230ENST00000591055 FAM157CP0CG43 387 aa13.79□□□□□ -0.2
CIRBP-230ENST00000591055 UQCRBP14927 111 aa13.79□□□□□ -0.2
CIRBP-230ENST00000591055 APOBEC3AP31941 199 aaPredicted RBP13.79□□□□□ -0.2
CIRBP-230ENST00000591055 EFNA4P52798 201 aa13.79□□□□□ -0.2
CIRBP-230ENST00000591055 NME5P56597 212 aa13.79□□□□□ -0.2
CIRBP-230ENST00000591055 TXNL4AP83876 142 aaKnown RBP13.79□□□□□ -0.2
CIRBP-230ENST00000591055 SLC25A3Q00325 362 aa13.79□□□□□ -0.2
CIRBP-230ENST00000591055 KRT71Q3SY84 523 aa13.79□□□□□ -0.2
CIRBP-230ENST00000591055 TSPO2Q5TGU0 170 aa13.79□□□□□ -0.2
CIRBP-230ENST00000591055 PAQR6Q6TCH4 344 aa13.79□□□□□ -0.2
CIRBP-230ENST00000591055 KLHL24Q6TFL4 600 aa13.79□□□□□ -0.2
CIRBP-230ENST00000591055 LRRC74BQ6ZQY2 392 aa13.79□□□□□ -0.2
CIRBP-230ENST00000591055 LSRQ86X29 649 aaPredicted RBP13.79□□□□□ -0.2
CIRBP-230ENST00000591055 LRRC34Q8IZ02 419 aa13.79□□□□□ -0.2
CIRBP-230ENST00000591055 PANX1Q96RD7 426 aa13.79□□□□□ -0.2
CIRBP-230ENST00000591055 KCNK17Q96T54 332 aa13.79□□□□□ -0.2
CIRBP-230ENST00000591055 MANSC1Q9H8J5 431 aa13.79□□□□□ -0.2
CIRBP-230ENST00000591055 MTHFD2LQ9H903 347 aaPredicted RBP13.79□□□□□ -0.2
CIRBP-230ENST00000591055 ZC3H12DA2A288 527 aaKnown RBP13.78□□□□□ -0.2
CIRBP-230ENST00000591055 RGS16O15492 202 aaPredicted RBP13.78□□□□□ -0.2
CIRBP-230ENST00000591055 WNT11O96014 354 aa13.78□□□□□ -0.2
CIRBP-230ENST00000591055 DBIP07108 87 aaKnown RBP13.78□□□□□ -0.2
CIRBP-230ENST00000591055 CSF3P09919 207 aa13.78□□□□□ -0.2
CIRBP-230ENST00000591055 NR2F1P10589 423 aa13.78□□□□□ -0.2
CIRBP-230ENST00000591055 IL7RP16871 459 aa13.78□□□□□ -0.2
CIRBP-230ENST00000591055 BGNP21810 368 aa13.78□□□□□ -0.2
CIRBP-230ENST00000591055 RPS4Y1P22090 263 aaKnown RBP13.78□□□□□ -0.2
CIRBP-230ENST00000591055 MPGP29372 298 aa13.78□□□□□ -0.2
CIRBP-230ENST00000591055 PRPS1P60891 318 aa13.78□□□□□ -0.2
CIRBP-230ENST00000591055 UFM1P61960 85 aa13.78□□□□□ -0.2
CIRBP-230ENST00000591055 EPS8Q12929 822 aa13.78□□□□□ -0.2
CIRBP-230ENST00000591055 OTUD3Q5T2D3 398 aaPredicted RBP13.78□□□□□ -0.2
CIRBP-230ENST00000591055 MRPL2Q5T653 305 aaKnown RBP13.78□□□□□ -0.2
CIRBP-230ENST00000591055 C1QTNF12Q5T7M4 302 aa13.78□□□□□ -0.2
CIRBP-230ENST00000591055 ZNF621Q6ZSS3 439 aa13.78□□□□□ -0.2
CIRBP-230ENST00000591055 AAED1Q7RTV5 226 aa13.78□□□□□ -0.2
CIRBP-230ENST00000591055 C10orf105Q8TEF2 133 aa13.78□□□□□ -0.2
CIRBP-230ENST00000591055 PROX1Q92786 737 aa13.78□□□□□ -0.2
CIRBP-230ENST00000591055 TMEM45BQ96B21 275 aa13.78□□□□□ -0.2
CIRBP-230ENST00000591055 TEX37Q96LM6 180 aa13.78□□□□□ -0.2
CIRBP-230ENST00000591055 BEX2Q9BXY8 128 aa13.78□□□□□ -0.2
CIRBP-230ENST00000591055 MEAF6Q9HAF1 191 aa13.78□□□□□ -0.2
CIRBP-230ENST00000591055 HAO1Q9UJM8 370 aa13.78□□□□□ -0.2
CIRBP-230ENST00000591055 ATP6V1G2-DDX39BF2Z307 99 aa13.77□□□□□ -0.21
CIRBP-230ENST00000591055 TM9SF1O15321 606 aa13.77□□□□□ -0.21
CIRBP-230ENST00000591055 AKR7A3O95154 331 aa13.77□□□□□ -0.21
CIRBP-230ENST00000591055 GPIP06744 558 aa13.77□□□□□ -0.21
CIRBP-230ENST00000591055 CDH2P19022 906 aaPredicted RBP13.77□□□□□ -0.21
CIRBP-230ENST00000591055 CXCR1P25024 350 aa13.77□□□□□ -0.21
CIRBP-230ENST00000591055 CDKN2CP42773 168 aa13.77□□□□□ -0.21
CIRBP-230ENST00000591055 STX3Q13277 289 aa13.77□□□□□ -0.21
CIRBP-230ENST00000591055 CEACAM7Q14002 265 aa13.77□□□□□ -0.21
CIRBP-230ENST00000591055 OR7A5Q15622 319 aa13.77□□□□□ -0.21
CIRBP-230ENST00000591055 GSTA3Q16772 222 aa13.77□□□□□ -0.21
CIRBP-230ENST00000591055 MALRD1Q5VYJ5 2156 aa13.77□□□□□ -0.21
CIRBP-230ENST00000591055 CYB5R2Q6BCY4 276 aa13.77□□□□□ -0.21
CIRBP-230ENST00000591055 OGFOD2Q6N063 350 aa13.77□□□□□ -0.21
CIRBP-230ENST00000591055 PEX5LQ8IYB4 626 aa13.77□□□□□ -0.21
CIRBP-230ENST00000591055 ZNF440Q8IYI8 595 aa13.77□□□□□ -0.21
CIRBP-230ENST00000591055 TMEM99Q8N816 258 aa13.77□□□□□ -0.21
CIRBP-230ENST00000591055 ZIC4Q8N9L1 334 aa13.77□□□□□ -0.21
CIRBP-230ENST00000591055 POMGNT2Q8NAT1 580 aa13.77□□□□□ -0.21
CIRBP-230ENST00000591055 OR9K2Q8NGE7 335 aa13.77□□□□□ -0.21
CIRBP-230ENST00000591055 PNPT1Q8TCS8 783 aaKnown RBP13.77□□□□□ -0.21
CIRBP-230ENST00000591055 NANOS1Q8WY41 292 aaKnown RBP13.77□□□□□ -0.21
CIRBP-230ENST00000591055 OR52E6Q96RD3 313 aa13.77□□□□□ -0.21
CIRBP-230ENST00000591055 SF3B5Q9BWJ5 86 aaKnown RBP13.77□□□□□ -0.21
CIRBP-230ENST00000591055 ADAM19Q9H013 955 aa13.77□□□□□ -0.21
CIRBP-230ENST00000591055 SSU72Q9NP77 194 aaKnown RBP13.77□□□□□ -0.21
CIRBP-230ENST00000591055 PNPOQ9NVS9 261 aa13.77□□□□□ -0.21
CIRBP-230ENST00000591055 TMEM160Q9NX00 188 aa13.77□□□□□ -0.21
CIRBP-230ENST00000591055 NBEAL1Q6ZS30 2694 aa13.76□□□□□ -0.21
CIRBP-230ENST00000591055 LIPT2A6NK58 231 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms