RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 PSD2Q9BQI7 771 aa10.61□□□□□ -0.71
LIG3-213ENST00000590630 ALG2Q9H553 416 aa10.61□□□□□ -0.71
LIG3-213ENST00000590630 BCO1Q9HAY6 547 aa10.61□□□□□ -0.71
LIG3-213ENST00000590630 TMEM27Q9HBJ8 222 aa10.61□□□□□ -0.71
LIG3-213ENST00000590630 SPAG4Q9NPE6 437 aa10.61□□□□□ -0.71
LIG3-213ENST00000590630 ELOVL5Q9NYP7 299 aa10.61□□□□□ -0.71
LIG3-213ENST00000590630 SELENONQ9NZV5 590 aa10.61□□□□□ -0.71
LIG3-213ENST00000590630 ABCD2Q9UBJ2 740 aa10.61□□□□□ -0.71
LIG3-213ENST00000590630 KCNN3Q9UGI6 736 aa10.61□□□□□ -0.71
LIG3-213ENST00000590630 BAG5Q9UL15 447 aa10.61□□□□□ -0.71
LIG3-213ENST00000590630 SLC9A8Q9Y2E8 581 aa10.61□□□□□ -0.71
LIG3-213ENST00000590630 ZNF724A8MTY0 619 aa10.6□□□□□ -0.71
LIG3-213ENST00000590630 M0R3H8 397 aa10.6□□□□□ -0.71
LIG3-213ENST00000590630 NME4O00746 187 aa10.6□□□□□ -0.71
LIG3-213ENST00000590630 NPIPB7O75200 414 aa10.6□□□□□ -0.71
LIG3-213ENST00000590630 GPIP06744 558 aa10.6□□□□□ -0.71
LIG3-213ENST00000590630 IMPDH2P12268 514 aa10.6□□□□□ -0.71
LIG3-213ENST00000590630 SSTR2P30874 369 aa10.6□□□□□ -0.71
LIG3-213ENST00000590630 CPOXP36551 454 aa10.6□□□□□ -0.71
LIG3-213ENST00000590630 KIR2DL3P43628 341 aa10.6□□□□□ -0.71
LIG3-213ENST00000590630 OR2B6P58173 313 aa10.6□□□□□ -0.71
LIG3-213ENST00000590630 PSME3P61289 254 aa10.6□□□□□ -0.71
LIG3-213ENST00000590630 H3F3AP84243 136 aa10.6□□□□□ -0.71
LIG3-213ENST00000590630 LIPEQ05469 1076 aa10.6□□□□□ -0.71
LIG3-213ENST00000590630 BNIP2Q12982 314 aa10.6□□□□□ -0.71
LIG3-213ENST00000590630 PDK3Q15120 406 aa10.6□□□□□ -0.71
LIG3-213ENST00000590630 ALG10BQ5I7T1 473 aa10.6□□□□□ -0.71
LIG3-213ENST00000590630 C1orf140Q5VVS0 124 aa10.6□□□□□ -0.71
LIG3-213ENST00000590630 ZNF613Q6PF04 617 aa10.6□□□□□ -0.71
LIG3-213ENST00000590630 PAQR6Q6TCH4 344 aa10.6□□□□□ -0.71
LIG3-213ENST00000590630 STK32CQ86UX6 486 aa10.6□□□□□ -0.71
LIG3-213ENST00000590630 TUSC5Q8IXB3 177 aa10.6□□□□□ -0.71
LIG3-213ENST00000590630 OR6T1Q8NGN1 323 aa10.6□□□□□ -0.71
LIG3-213ENST00000590630 PROX1Q92786 737 aa10.6□□□□□ -0.71
LIG3-213ENST00000590630 C14orf79Q96F83 325 aa10.6□□□□□ -0.71
LIG3-213ENST00000590630 SLC47A1Q96FL8 570 aa10.6□□□□□ -0.71
LIG3-213ENST00000590630 WFDC6Q9BQY6 131 aa10.6□□□□□ -0.71
LIG3-213ENST00000590630 PCDHAC1Q9H158 963 aa10.6□□□□□ -0.71
LIG3-213ENST00000590630 OPN3Q9H1Y3 402 aaPredicted RBP10.6□□□□□ -0.71
LIG3-213ENST00000590630 FANCFQ9NPI8 374 aa10.6□□□□□ -0.71
LIG3-213ENST00000590630 EMC3Q9P0I2 261 aa10.6□□□□□ -0.71
LIG3-213ENST00000590630 TAGLN3Q9UI15 199 aa10.6□□□□□ -0.71
LIG3-213ENST00000590630 USP22Q9UPT9 525 aa10.6□□□□□ -0.71
LIG3-213ENST00000590630 ANKRD17O75179 2603 aaKnown RBP10.59□□□□□ -0.71
LIG3-213ENST00000590630 ABCA4P78363 2273 aa10.59□□□□□ -0.71
LIG3-213ENST00000590630 IGKV3D-15A0A087WSY6 115 aa10.59□□□□□ -0.71
LIG3-213ENST00000590630 A0A0B4J2E0 115 aa10.59□□□□□ -0.71
LIG3-213ENST00000590630 A0A1B0GX12 115 aa10.59□□□□□ -0.71
LIG3-213ENST00000590630 TUBAL3A6NHL2 446 aa10.59□□□□□ -0.71
LIG3-213ENST00000590630 LIPT2A6NK58 231 aa10.59□□□□□ -0.71
LIG3-213ENST00000590630 TPST2O60704 377 aa10.59□□□□□ -0.71
LIG3-213ENST00000590630 AHSA1O95433 338 aa10.59□□□□□ -0.71
LIG3-213ENST00000590630 FPR1P21462 350 aa10.59□□□□□ -0.71
LIG3-213ENST00000590630 KDELR2P33947 212 aa10.59□□□□□ -0.71
LIG3-213ENST00000590630 CD79BP40259 229 aa10.59□□□□□ -0.71
LIG3-213ENST00000590630 MNAT1P51948 309 aa10.59□□□□□ -0.71
LIG3-213ENST00000590630 SLC16A1P53985 500 aa10.59□□□□□ -0.71
LIG3-213ENST00000590630 OR1Q1Q15612 314 aa10.59□□□□□ -0.71
LIG3-213ENST00000590630 LRRC23Q53EV4 343 aaPredicted RBP10.59□□□□□ -0.71
LIG3-213ENST00000590630 ZNF474Q6S9Z5 364 aaPredicted RBP10.59□□□□□ -0.71
LIG3-213ENST00000590630 BEND4Q6ZU67 534 aa10.59□□□□□ -0.71
LIG3-213ENST00000590630 ZNF295-AS1Q8N0V1 137 aa10.59□□□□□ -0.71
LIG3-213ENST00000590630 ZNF610Q8N9Z0 462 aa10.59□□□□□ -0.71
LIG3-213ENST00000590630 CCDC197Q8NCU1 140 aa10.59□□□□□ -0.71
LIG3-213ENST00000590630 FAM222BQ8WU58 562 aa10.59□□□□□ -0.71
LIG3-213ENST00000590630 SLC38A4Q969I6 547 aa10.59□□□□□ -0.71
LIG3-213ENST00000590630 DNAJA3Q96EY1 480 aa10.59□□□□□ -0.71
LIG3-213ENST00000590630 MCHR1Q99705 422 aa10.59□□□□□ -0.71
LIG3-213ENST00000590630 NAA11Q9BSU3 229 aaPredicted RBP10.59□□□□□ -0.71
LIG3-213ENST00000590630 PRR14Q9BWN1 585 aa10.59□□□□□ -0.71
LIG3-213ENST00000590630 TAPBPLQ9BX59 468 aa10.59□□□□□ -0.71
LIG3-213ENST00000590630 C12orf49Q9H741 205 aa10.59□□□□□ -0.71
LIG3-213ENST00000590630 NDE1Q9NXR1 346 aa10.59□□□□□ -0.71
LIG3-213ENST00000590630 ING1Q9UK53 422 aaPredicted RBP10.59□□□□□ -0.71
LIG3-213ENST00000590630 CSMD2Q7Z408 3487 aa10.59□□□□□ -0.71
LIG3-213ENST00000590630 A0A087WUJ7 227 aa10.58□□□□□ -0.72
LIG3-213ENST00000590630 ZNF716A6NP11 495 aa10.58□□□□□ -0.72
LIG3-213ENST00000590630 GPR171O14626 319 aa10.58□□□□□ -0.72
LIG3-213ENST00000590630 GSTA4O15217 222 aa10.58□□□□□ -0.72
LIG3-213ENST00000590630 OR2T1O43869 369 aa10.58□□□□□ -0.72
LIG3-213ENST00000590630 PRF1P14222 555 aa10.58□□□□□ -0.72
LIG3-213ENST00000590630 POU2F1P14859 743 aa10.58□□□□□ -0.72
LIG3-213ENST00000590630 KLK2P20151 261 aa10.58□□□□□ -0.72
LIG3-213ENST00000590630 UGT2B10P36537 528 aa10.58□□□□□ -0.72
LIG3-213ENST00000590630 GSK3BP49841 420 aa10.58□□□□□ -0.72
LIG3-213ENST00000590630 CDH12P55289 794 aa10.58□□□□□ -0.72
LIG3-213ENST00000590630 SELENOWP63302 87 aa10.58□□□□□ -0.72
LIG3-213ENST00000590630 EGR4Q05215 589 aa10.58□□□□□ -0.72
LIG3-213ENST00000590630 CEACAM7Q14002 265 aa10.58□□□□□ -0.72
LIG3-213ENST00000590630 KRT72Q14CN4 511 aa10.58□□□□□ -0.72
LIG3-213ENST00000590630 OR7A5Q15622 319 aa10.58□□□□□ -0.72
LIG3-213ENST00000590630 NPTX1Q15818 432 aa10.58□□□□□ -0.72
LIG3-213ENST00000590630 CYBRD1Q53TN4 286 aa10.58□□□□□ -0.72
LIG3-213ENST00000590630 TFAP2EQ6VUC0 442 aa10.58□□□□□ -0.72
LIG3-213ENST00000590630 GALNT5Q7Z7M9 940 aa10.58□□□□□ -0.72
LIG3-213ENST00000590630 FITM2Q8N6M3 262 aa10.58□□□□□ -0.72
LIG3-213ENST00000590630 MFSD8Q8NHS3 518 aa10.58□□□□□ -0.72
LIG3-213ENST00000590630 VANGL1Q8TAA9 524 aaPredicted RBP10.58□□□□□ -0.72
LIG3-213ENST00000590630 ADAMTS16Q8TE57 1224 aa10.58□□□□□ -0.72
LIG3-213ENST00000590630 LZICQ8WZA0 190 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms