RNA–Protein interactions for RNA: ENST00000590034.2

SF3A2-205, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 3

Gene SF3A2, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-205ENST00000590034 SLC35A1P78382 337 aa12.13□□□□□ -0.47
SF3A2-205ENST00000590034 LGALS3BPQ08380 585 aa12.13□□□□□ -0.47
SF3A2-205ENST00000590034 PDCD2Q16342 344 aaPredicted RBP12.13□□□□□ -0.47
SF3A2-205ENST00000590034 ATAD3BQ5T9A4 648 aa12.13□□□□□ -0.47
SF3A2-205ENST00000590034 FAM166AQ6J272 317 aa12.13□□□□□ -0.47
SF3A2-205ENST00000590034 ANKFN1Q8N957 763 aa12.13□□□□□ -0.47
SF3A2-205ENST00000590034 TMEM45BQ96B21 275 aa12.13□□□□□ -0.47
SF3A2-205ENST00000590034 C3orf49Q96BT1 292 aa12.13□□□□□ -0.47
SF3A2-205ENST00000590034 NEURL3Q96EH8 262 aa12.13□□□□□ -0.47
SF3A2-205ENST00000590034 PIMREGQ9BSJ6 248 aa12.13□□□□□ -0.47
SF3A2-205ENST00000590034 AKTIPQ9H8T0 292 aa12.13□□□□□ -0.47
SF3A2-205ENST00000590034 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.13□□□□□ -0.47
SF3A2-205ENST00000590034 KCNS2Q9ULS6 477 aa12.13□□□□□ -0.47
SF3A2-205ENST00000590034 PCDHGB4Q9UN71 923 aa12.13□□□□□ -0.47
SF3A2-205ENST00000590034 IGHV1-18A0A0C4DH31 117 aa12.12□□□□□ -0.47
SF3A2-205ENST00000590034 PRSS51A0A1B0GVH4 220 aa12.12□□□□□ -0.47
SF3A2-205ENST00000590034 ZNF208O43345 1280 aa12.12□□□□□ -0.47
SF3A2-205ENST00000590034 ITM2AO43736 263 aa12.12□□□□□ -0.47
SF3A2-205ENST00000590034 EIF1BO60739 113 aaKnown RBP12.12□□□□□ -0.47
SF3A2-205ENST00000590034 CPSF4O95639 269 aaKnown RBP12.12□□□□□ -0.47
SF3A2-205ENST00000590034 AGR2O95994 175 aa12.12□□□□□ -0.47
SF3A2-205ENST00000590034 BPGMP07738 259 aa12.12□□□□□ -0.47
SF3A2-205ENST00000590034 CHRM4P08173 479 aa12.12□□□□□ -0.47
SF3A2-205ENST00000590034 ETV4P43268 484 aa12.12□□□□□ -0.47
SF3A2-205ENST00000590034 HTR3AP46098 478 aa12.12□□□□□ -0.47
SF3A2-205ENST00000590034 KHKP50053 298 aa12.12□□□□□ -0.47
SF3A2-205ENST00000590034 POLR2HP52434 150 aaKnown RBP12.12□□□□□ -0.47
SF3A2-205ENST00000590034 PRPS1P60891 318 aa12.12□□□□□ -0.47
SF3A2-205ENST00000590034 TGFBR3Q03167 851 aa12.12□□□□□ -0.47
SF3A2-205ENST00000590034 MAD2L1Q13257 205 aaPredicted RBP12.12□□□□□ -0.47
SF3A2-205ENST00000590034 CASP8Q14790 479 aa12.12□□□□□ -0.47
SF3A2-205ENST00000590034 SYPL1Q16563 259 aa12.12□□□□□ -0.47
SF3A2-205ENST00000590034 GPAT3Q53EU6 434 aa12.12□□□□□ -0.47
SF3A2-205ENST00000590034 SPANXN4Q5MJ08 99 aa12.12□□□□□ -0.47
SF3A2-205ENST00000590034 PAQR6Q6TCH4 344 aa12.12□□□□□ -0.47
SF3A2-205ENST00000590034 TMEM99Q8N816 258 aa12.12□□□□□ -0.47
SF3A2-205ENST00000590034 OR9K2Q8NGE7 335 aa12.12□□□□□ -0.47
SF3A2-205ENST00000590034 DDIT4LQ96D03 193 aa12.12□□□□□ -0.47
SF3A2-205ENST00000590034 FOXN4Q96NZ1 517 aa12.12□□□□□ -0.47
SF3A2-205ENST00000590034 SLC35A5Q9BS91 424 aa12.12□□□□□ -0.47
SF3A2-205ENST00000590034 SLC38A1Q9H2H9 487 aa12.12□□□□□ -0.47
SF3A2-205ENST00000590034 PARPBPQ9NWS1 579 aa12.12□□□□□ -0.47
SF3A2-205ENST00000590034 LGALS13Q9UHV8 139 aa12.12□□□□□ -0.47
SF3A2-205ENST00000590034 FKBP7Q9Y680 259 aa12.12□□□□□ -0.47
SF3A2-205ENST00000590034 AGAP5A6NIR3 686 aa12.11□□□□□ -0.47
SF3A2-205ENST00000590034 NDUFS8O00217 210 aa12.11□□□□□ -0.47
SF3A2-205ENST00000590034 AKR7A3O95154 331 aa12.11□□□□□ -0.47
SF3A2-205ENST00000590034 APEHP13798 732 aaKnown RBP12.11□□□□□ -0.47
SF3A2-205ENST00000590034 RPS4Y1P22090 263 aaKnown RBP12.11□□□□□ -0.47
SF3A2-205ENST00000590034 SLC1A3P43003 542 aa12.11□□□□□ -0.47
SF3A2-205ENST00000590034 P2RY4P51582 365 aa12.11□□□□□ -0.47
SF3A2-205ENST00000590034 CEACAM7Q14002 265 aa12.11□□□□□ -0.47
SF3A2-205ENST00000590034 SMU1Q2TAY7 513 aa12.11□□□□□ -0.47
SF3A2-205ENST00000590034 OTUD3Q5T2D3 398 aaPredicted RBP12.11□□□□□ -0.47
SF3A2-205ENST00000590034 LINGO2Q7L985 606 aa12.11□□□□□ -0.47
SF3A2-205ENST00000590034 RNF130Q86XS8 419 aa12.11□□□□□ -0.47
SF3A2-205ENST00000590034 ZNF781Q8N8C0 355 aa12.11□□□□□ -0.47
SF3A2-205ENST00000590034 TESCQ96BS2 214 aa12.11□□□□□ -0.47
SF3A2-205ENST00000590034 BOD1Q96IK1 185 aa12.11□□□□□ -0.47
SF3A2-205ENST00000590034 PKNOX2Q96KN3 472 aa12.11□□□□□ -0.47
SF3A2-205ENST00000590034 NAA11Q9BSU3 229 aaPredicted RBP12.11□□□□□ -0.47
SF3A2-205ENST00000590034 DPY30Q9C005 99 aa12.11□□□□□ -0.47
SF3A2-205ENST00000590034 BPESC1Q9GZL8 116 aa12.11□□□□□ -0.47
SF3A2-205ENST00000590034 C20orf27Q9GZN8 174 aa12.11□□□□□ -0.47
SF3A2-205ENST00000590034 SEC61A2Q9H9S3 476 aa12.11□□□□□ -0.47
SF3A2-205ENST00000590034 CA10Q9NS85 328 aa12.11□□□□□ -0.47
SF3A2-205ENST00000590034 MARCOQ9UEW3 520 aaPredicted RBP12.11□□□□□ -0.47
SF3A2-205ENST00000590034 LOC390937A0A1W2PQ73 354 aa12.1□□□□□ -0.47
SF3A2-205ENST00000590034 LIPT2A6NK58 231 aa12.1□□□□□ -0.47
SF3A2-205ENST00000590034 AQP7P3A6NL99 342 aa12.1□□□□□ -0.47
SF3A2-205ENST00000590034 HAX1O00165 279 aa12.1□□□□□ -0.47
SF3A2-205ENST00000590034 FAAHO00519 579 aa12.1□□□□□ -0.47
SF3A2-205ENST00000590034 TYROBPO43914 113 aa12.1□□□□□ -0.47
SF3A2-205ENST00000590034 LGI1O95970 557 aa12.1□□□□□ -0.47
SF3A2-205ENST00000590034 WNT11O96014 354 aa12.1□□□□□ -0.47
SF3A2-205ENST00000590034 NUDT17P0C025 328 aa12.1□□□□□ -0.47
SF3A2-205ENST00000590034 SERPINF1P36955 418 aa12.1□□□□□ -0.47
SF3A2-205ENST00000590034 SNRPD2P62316 118 aaKnown RBP12.1□□□□□ -0.47
SF3A2-205ENST00000590034 TUBA1BP68363 451 aa12.1□□□□□ -0.47
SF3A2-205ENST00000590034 TUBA4AP68366 448 aa12.1□□□□□ -0.47
SF3A2-205ENST00000590034 HPCAP84074 193 aa12.1□□□□□ -0.47
SF3A2-205ENST00000590034 EPS8Q12929 822 aa12.1□□□□□ -0.47
SF3A2-205ENST00000590034 OR7A5Q15622 319 aa12.1□□□□□ -0.47
SF3A2-205ENST00000590034 MAPK11Q15759 364 aa12.1□□□□□ -0.47
SF3A2-205ENST00000590034 ADIPOQQ15848 244 aa12.1□□□□□ -0.47
SF3A2-205ENST00000590034 CARTPTQ16568 116 aa12.1□□□□□ -0.47
SF3A2-205ENST00000590034 TBRG1Q3YBR2 411 aa12.1□□□□□ -0.47
SF3A2-205ENST00000590034 MRPL2Q5T653 305 aaKnown RBP12.1□□□□□ -0.47
SF3A2-205ENST00000590034 KLHL24Q6TFL4 600 aa12.1□□□□□ -0.47
SF3A2-205ENST00000590034 TUBA1AQ71U36 451 aa12.1□□□□□ -0.47
SF3A2-205ENST00000590034 AAED1Q7RTV5 226 aa12.1□□□□□ -0.47
SF3A2-205ENST00000590034 SLC46A3Q7Z3Q1 461 aa12.1□□□□□ -0.47
SF3A2-205ENST00000590034 SPATA19Q7Z5L4 167 aa12.1□□□□□ -0.47
SF3A2-205ENST00000590034 RIBC1Q8N443 379 aaPredicted RBP12.1□□□□□ -0.47
SF3A2-205ENST00000590034 POMGNT2Q8NAT1 580 aa12.1□□□□□ -0.47
SF3A2-205ENST00000590034 OR1K1Q8NGR3 316 aa12.1□□□□□ -0.47
SF3A2-205ENST00000590034 PMM1Q92871 262 aa12.1□□□□□ -0.47
SF3A2-205ENST00000590034 AURKBQ96GD4 344 aaPredicted RBP12.1□□□□□ -0.47
SF3A2-205ENST00000590034 TEX37Q96LM6 180 aa12.1□□□□□ -0.47
SF3A2-205ENST00000590034 TRNT1Q96Q11 434 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms