RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 SLX4IPQ5VYV7 408 aa20.14■□□□□ 0.81
ATG4D-209ENST00000588857 SLC27A4Q6P1M0 643 aa20.14■□□□□ 0.81
ATG4D-209ENST00000588857 SMARCD3Q6STE5 483 aa20.14■□□□□ 0.81
ATG4D-209ENST00000588857 CASP12Q6UXS9 341 aa20.14■□□□□ 0.81
ATG4D-209ENST00000588857 MDS2Q8NDY4 140 aa20.14■□□□□ 0.81
ATG4D-209ENST00000588857 SAMD8Q96LT4 415 aa20.14■□□□□ 0.81
ATG4D-209ENST00000588857 TSSK6Q9BXA6 273 aa20.14■□□□□ 0.81
ATG4D-209ENST00000588857 TEX12Q9BXU0 123 aa20.14■□□□□ 0.81
ATG4D-209ENST00000588857 OR52D1Q9H346 318 aa20.14■□□□□ 0.81
ATG4D-209ENST00000588857 ZFP64Q9NPA5 681 aa20.14■□□□□ 0.81
ATG4D-209ENST00000588857 NANSQ9NR45 359 aa20.14■□□□□ 0.81
ATG4D-209ENST00000588857 KLHL1Q9NR64 748 aa20.14■□□□□ 0.81
ATG4D-209ENST00000588857 SIGLEC7Q9Y286 467 aa20.14■□□□□ 0.81
ATG4D-209ENST00000588857 KLF13Q9Y2Y9 288 aaPredicted RBP20.14■□□□□ 0.81
ATG4D-209ENST00000588857 ZFYVE26Q68DK2 2539 aa20.14■□□□□ 0.81
ATG4D-209ENST00000588857 NCKAP5O14513 1909 aa20.13■□□□□ 0.81
ATG4D-209ENST00000588857 TRAV27A0A087WT01 109 aa20.13■□□□□ 0.81
ATG4D-209ENST00000588857 ZC3H12DA2A288 527 aaKnown RBP20.13■□□□□ 0.81
ATG4D-209ENST00000588857 CDK5Q00535 292 aa20.13■□□□□ 0.81
ATG4D-209ENST00000588857 CD47Q08722 323 aa20.13■□□□□ 0.81
ATG4D-209ENST00000588857 CLEC12AQ5QGZ9 265 aa20.13■□□□□ 0.81
ATG4D-209ENST00000588857 C1orf140Q5VVS0 124 aa20.13■□□□□ 0.81
ATG4D-209ENST00000588857 SLC25A25Q6KCM7 469 aa20.13■□□□□ 0.81
ATG4D-209ENST00000588857 SLC46A3Q7Z3Q1 461 aa20.13■□□□□ 0.81
ATG4D-209ENST00000588857 CCDC71Q8IV32 467 aaPredicted RBP20.13■□□□□ 0.81
ATG4D-209ENST00000588857 ZNF786Q8N393 782 aa20.13■□□□□ 0.81
ATG4D-209ENST00000588857 OR2M7Q8NG81 312 aa20.13■□□□□ 0.81
ATG4D-209ENST00000588857 OR8D4Q8NGM9 314 aa20.13■□□□□ 0.81
ATG4D-209ENST00000588857 POC1BQ8TC44 478 aa20.13■□□□□ 0.81
ATG4D-209ENST00000588857 TAAR8Q969N4 342 aa20.13■□□□□ 0.81
ATG4D-209ENST00000588857 DDIT4LQ96D03 193 aa20.13■□□□□ 0.81
ATG4D-209ENST00000588857 SLC25A19Q9HC21 320 aa20.13■□□□□ 0.81
ATG4D-209ENST00000588857 SPIN1Q9Y657 262 aaPredicted RBP20.13■□□□□ 0.81
ATG4D-209ENST00000588857 PTPRQQ9UMZ3 2332 aa20.13■□□□□ 0.81
ATG4D-209ENST00000588857 ITPR1Q14643 2758 aa20.13■□□□□ 0.81
ATG4D-209ENST00000588857 LRRN3E7EW58 273 aa20.12■□□□□ 0.81
ATG4D-209ENST00000588857 NME2P1O60361 137 aa20.12■□□□□ 0.81
ATG4D-209ENST00000588857 PTP4A3O75365 173 aa20.12■□□□□ 0.81
ATG4D-209ENST00000588857 CEACAM4O75871 244 aa20.12■□□□□ 0.81
ATG4D-209ENST00000588857 AHSA1O95433 338 aa20.12■□□□□ 0.81
ATG4D-209ENST00000588857 HIST1H2ABP04908 130 aa20.12■□□□□ 0.81
ATG4D-209ENST00000588857 NME2P22392 152 aa20.12■□□□□ 0.81
ATG4D-209ENST00000588857 CXADRP78310 365 aa20.12■□□□□ 0.81
ATG4D-209ENST00000588857 MYBPC1Q00872 1141 aa20.12■□□□□ 0.81
ATG4D-209ENST00000588857 HIST3H2AQ7L7L0 130 aa20.12■□□□□ 0.81
ATG4D-209ENST00000588857 SULF2Q8IWU5 870 aa20.12■□□□□ 0.81
ATG4D-209ENST00000588857 GTPBP8Q8N3Z3 284 aaPredicted RBP20.12■□□□□ 0.81
ATG4D-209ENST00000588857 IQCF1Q8N6M8 205 aa20.12■□□□□ 0.81
ATG4D-209ENST00000588857 LRRC17Q8N6Y2 441 aa20.12■□□□□ 0.81
ATG4D-209ENST00000588857 ATP6V1C2Q8NEY4 427 aa20.12■□□□□ 0.81
ATG4D-209ENST00000588857 HIST1H2ACQ93077 130 aa20.12■□□□□ 0.81
ATG4D-209ENST00000588857 TNFRSF13CQ96RJ3 184 aa20.12■□□□□ 0.81
ATG4D-209ENST00000588857 HES7Q9BYE0 225 aa20.12■□□□□ 0.81
ATG4D-209ENST00000588857 RASSF1Q9NS23 344 aa20.12■□□□□ 0.81
ATG4D-209ENST00000588857 RPH3AQ9Y2J0 694 aaPredicted RBP20.12■□□□□ 0.81
ATG4D-209ENST00000588857 FAM208BQ5VWN6 2430 aa20.12■□□□□ 0.81
ATG4D-209ENST00000588857 LRRC3CA6NJW4 275 aa20.12■□□□□ 0.81
ATG4D-209ENST00000588857 KLRC4-KLRK1H3BQV0 150 aa20.12■□□□□ 0.81
ATG4D-209ENST00000588857 OR2T1O43869 369 aa20.12■□□□□ 0.81
ATG4D-209ENST00000588857 NPIPB7O75200 414 aa20.12■□□□□ 0.81
ATG4D-209ENST00000588857 TNFAIP8O95379 198 aa20.12■□□□□ 0.81
ATG4D-209ENST00000588857 TFPIP10646 304 aa20.12■□□□□ 0.81
ATG4D-209ENST00000588857 SRD5A2P31213 254 aa20.12■□□□□ 0.81
ATG4D-209ENST00000588857 C12orf73Q69YU5 71 aa20.12■□□□□ 0.81
ATG4D-209ENST00000588857 OR2T33Q8NG76 320 aa20.12■□□□□ 0.81
ATG4D-209ENST00000588857 OR5M1Q8NGP8 315 aa20.12■□□□□ 0.81
ATG4D-209ENST00000588857 LIPHQ8WWY8 451 aa20.12■□□□□ 0.81
ATG4D-209ENST00000588857 MOGAT1Q96PD6 335 aa20.12■□□□□ 0.81
ATG4D-209ENST00000588857 PRRG3Q9BZD7 231 aa20.12■□□□□ 0.81
ATG4D-209ENST00000588857 OR11A1Q9GZK7 315 aa20.12■□□□□ 0.81
ATG4D-209ENST00000588857 FKRPQ9H9S5 495 aa20.12■□□□□ 0.81
ATG4D-209ENST00000588857 B4GALT7Q9UBV7 327 aa20.12■□□□□ 0.81
ATG4D-209ENST00000588857 IL20RAQ9UHF4 553 aa20.12■□□□□ 0.81
ATG4D-209ENST00000588857 ZNF229Q9UJW7 825 aa20.12■□□□□ 0.81
ATG4D-209ENST00000588857 RNF6Q9Y252 685 aa20.12■□□□□ 0.81
ATG4D-209ENST00000588857 PINLYPA6NC86 204 aa20.11■□□□□ 0.81
ATG4D-209ENST00000588857 MAGEA13PA6NCF6 341 aa20.11■□□□□ 0.81
ATG4D-209ENST00000588857 ZIC3O60481 467 aa20.11■□□□□ 0.81
ATG4D-209ENST00000588857 MT-ATP6P00846 226 aa20.11■□□□□ 0.81
ATG4D-209ENST00000588857 LYNP07948 512 aa20.11■□□□□ 0.81
ATG4D-209ENST00000588857 IL11P20809 199 aa20.11■□□□□ 0.81
ATG4D-209ENST00000588857 FKBP2P26885 142 aaKnown RBP20.11■□□□□ 0.81
ATG4D-209ENST00000588857 FOXK1P85037 733 aa20.11■□□□□ 0.81
ATG4D-209ENST00000588857 FOXO1Q12778 655 aa20.11■□□□□ 0.81
ATG4D-209ENST00000588857 SELENBP1Q13228 472 aa20.11■□□□□ 0.81
ATG4D-209ENST00000588857 MAD2L1BPQ15013 274 aaPredicted RBP20.11■□□□□ 0.81
ATG4D-209ENST00000588857 CTU2Q2VPK5 515 aaKnown RBP20.11■□□□□ 0.81
ATG4D-209ENST00000588857 GLYR1Q49A26 553 aaPredicted RBP20.11■□□□□ 0.81
ATG4D-209ENST00000588857 FAM69AQ5T7M9 428 aa20.11■□□□□ 0.81
ATG4D-209ENST00000588857 C1QL3Q5VWW1 255 aa20.11■□□□□ 0.81
ATG4D-209ENST00000588857 RAET1LQ5VY80 246 aa20.11■□□□□ 0.81
ATG4D-209ENST00000588857 C3orf33Q6P1S2 294 aa20.11■□□□□ 0.81
ATG4D-209ENST00000588857 PTCHD4Q6ZW05 846 aa20.11■□□□□ 0.81
ATG4D-209ENST00000588857 ENTHD1Q8IYW4 607 aa20.11■□□□□ 0.81
ATG4D-209ENST00000588857 SLC43A2Q8N370 569 aa20.11■□□□□ 0.81
ATG4D-209ENST00000588857 SNRNP27Q8WVK2 155 aaKnown RBP20.11■□□□□ 0.81
ATG4D-209ENST00000588857 UBE2FQ969M7 185 aa20.11■□□□□ 0.81
ATG4D-209ENST00000588857 SLC38A2Q96QD8 506 aa20.11■□□□□ 0.81
ATG4D-209ENST00000588857 MCCC2Q9HCC0 563 aa20.11■□□□□ 0.81
ATG4D-209ENST00000588857 MYRFQ9Y2G1 1151 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms