RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 PAQR6Q6TCH4 344 aa16.07■□□□□ 0.16
CCDC43-204ENST00000588687 TESCQ96BS2 214 aa16.07■□□□□ 0.16
CCDC43-204ENST00000588687 ZNF385AQ96PM9 386 aaKnown RBP16.07■□□□□ 0.16
CCDC43-204ENST00000588687 SLC38A1Q9H2H9 487 aa16.07■□□□□ 0.16
CCDC43-204ENST00000588687 AKTIPQ9H8T0 292 aa16.07■□□□□ 0.16
CCDC43-204ENST00000588687 MOKQ9UQ07 419 aa16.07■□□□□ 0.16
CCDC43-204ENST00000588687 TMED7Q9Y3B3 224 aa16.07■□□□□ 0.16
CCDC43-204ENST00000588687 IGHV1-18A0A0C4DH31 117 aa16.06■□□□□ 0.16
CCDC43-204ENST00000588687 PRSS51A0A1B0GVH4 220 aa16.06■□□□□ 0.16
CCDC43-204ENST00000588687 AGAP5A6NIR3 686 aa16.06■□□□□ 0.16
CCDC43-204ENST00000588687 NDUFS8O00217 210 aa16.06■□□□□ 0.16
CCDC43-204ENST00000588687 ITM2AO43736 263 aa16.06■□□□□ 0.16
CCDC43-204ENST00000588687 TYROBPO43914 113 aa16.06■□□□□ 0.16
CCDC43-204ENST00000588687 CHRM4P08173 479 aa16.06■□□□□ 0.16
CCDC43-204ENST00000588687 SRD5A1P18405 259 aa16.06■□□□□ 0.16
CCDC43-204ENST00000588687 HTR3AP46098 478 aa16.06■□□□□ 0.16
CCDC43-204ENST00000588687 P2RY4P51582 365 aa16.06■□□□□ 0.16
CCDC43-204ENST00000588687 POLR2HP52434 150 aaKnown RBP16.06■□□□□ 0.16
CCDC43-204ENST00000588687 SLC35A1P78382 337 aa16.06■□□□□ 0.16
CCDC43-204ENST00000588687 HIKESHIQ53FT3 197 aa16.06■□□□□ 0.16
CCDC43-204ENST00000588687 FAM120AOSQ5T036 256 aa16.06■□□□□ 0.16
CCDC43-204ENST00000588687 SOX7Q9BT81 388 aa16.06■□□□□ 0.16
CCDC43-204ENST00000588687 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.06■□□□□ 0.16
CCDC43-204ENST00000588687 PARPBPQ9NWS1 579 aa16.06■□□□□ 0.16
CCDC43-204ENST00000588687 PMF1-BGLAPU3KQ54 211 aa16.06■□□□□ 0.16
CCDC43-204ENST00000588687 TLDC2A0PJX2 215 aa16.05■□□□□ 0.16
CCDC43-204ENST00000588687 C8BP07358 591 aa16.05■□□□□ 0.16
CCDC43-204ENST00000588687 BMP4P12644 408 aa16.05■□□□□ 0.16
CCDC43-204ENST00000588687 TACR3P29371 465 aa16.05■□□□□ 0.16
CCDC43-204ENST00000588687 SLC1A3P43003 542 aa16.05■□□□□ 0.16
CCDC43-204ENST00000588687 PDLIM4P50479 330 aa16.05■□□□□ 0.16
CCDC43-204ENST00000588687 TGFBR3Q03167 851 aa16.05■□□□□ 0.16
CCDC43-204ENST00000588687 GGTLC2Q14390 218 aa16.05■□□□□ 0.16
CCDC43-204ENST00000588687 PDCD2Q16342 344 aaPredicted RBP16.05■□□□□ 0.16
CCDC43-204ENST00000588687 SPANXN4Q5MJ08 99 aa16.05■□□□□ 0.16
CCDC43-204ENST00000588687 FAM166AQ6J272 317 aa16.05■□□□□ 0.16
CCDC43-204ENST00000588687 CMIPQ8IY22 773 aa16.05■□□□□ 0.16
CCDC43-204ENST00000588687 ZNF781Q8N8C0 355 aa16.05■□□□□ 0.16
CCDC43-204ENST00000588687 ANKFN1Q8N957 763 aa16.05■□□□□ 0.16
CCDC43-204ENST00000588687 OR9K2Q8NGE7 335 aa16.05■□□□□ 0.16
CCDC43-204ENST00000588687 DDIT4LQ96D03 193 aa16.05■□□□□ 0.16
CCDC43-204ENST00000588687 FBXO17Q96EF6 278 aa16.05■□□□□ 0.16
CCDC43-204ENST00000588687 CHODLQ9H9P2 273 aa16.05■□□□□ 0.16
CCDC43-204ENST00000588687 UPB1Q9UBR1 384 aa16.05■□□□□ 0.16
CCDC43-204ENST00000588687 KCNS2Q9ULS6 477 aa16.05■□□□□ 0.16
CCDC43-204ENST00000588687 LIPT2A6NK58 231 aa16.04■□□□□ 0.16
CCDC43-204ENST00000588687 AQP7P3A6NL99 342 aa16.04■□□□□ 0.16
CCDC43-204ENST00000588687 PRPS1P60891 318 aa16.04■□□□□ 0.16
CCDC43-204ENST00000588687 EPS8Q12929 822 aa16.04■□□□□ 0.16
CCDC43-204ENST00000588687 MAPK11Q15759 364 aa16.04■□□□□ 0.16
CCDC43-204ENST00000588687 SYPL1Q16563 259 aa16.04■□□□□ 0.16
CCDC43-204ENST00000588687 OTUD3Q5T2D3 398 aaPredicted RBP16.04■□□□□ 0.16
CCDC43-204ENST00000588687 LINGO2Q7L985 606 aa16.04■□□□□ 0.16
CCDC43-204ENST00000588687 TMEM99Q8N816 258 aa16.04■□□□□ 0.16
CCDC43-204ENST00000588687 ANKS4BQ8N8V4 417 aa16.04■□□□□ 0.16
CCDC43-204ENST00000588687 PMM1Q92871 262 aa16.04■□□□□ 0.16
CCDC43-204ENST00000588687 PPP1R36Q96LQ0 422 aa16.04■□□□□ 0.16
CCDC43-204ENST00000588687 TRNT1Q96Q11 434 aaKnown RBP16.04■□□□□ 0.16
CCDC43-204ENST00000588687 SLC35A5Q9BS91 424 aa16.04■□□□□ 0.16
CCDC43-204ENST00000588687 PIMREGQ9BSJ6 248 aa16.04■□□□□ 0.16
CCDC43-204ENST00000588687 C20orf27Q9GZN8 174 aa16.04■□□□□ 0.16
CCDC43-204ENST00000588687 ADAM19Q9H013 955 aa16.04■□□□□ 0.16
CCDC43-204ENST00000588687 NELFAQ9H3P2 528 aa16.04■□□□□ 0.16
CCDC43-204ENST00000588687 CA10Q9NS85 328 aa16.04■□□□□ 0.16
CCDC43-204ENST00000588687 MARCOQ9UEW3 520 aaPredicted RBP16.04■□□□□ 0.16
CCDC43-204ENST00000588687 FKBP7Q9Y680 259 aa16.04■□□□□ 0.16
CCDC43-204ENST00000588687 LOC100289279A0A1B0GTE1 492 aa16.03■□□□□ 0.16
CCDC43-204ENST00000588687 KLF11O14901 512 aa16.03■□□□□ 0.16
CCDC43-204ENST00000588687 CPSF4O95639 269 aaKnown RBP16.03■□□□□ 0.16
CCDC43-204ENST00000588687 MAP2K6P52564 334 aa16.03■□□□□ 0.16
CCDC43-204ENST00000588687 HPCAP84074 193 aa16.03■□□□□ 0.16
CCDC43-204ENST00000588687 LGALS3BPQ08380 585 aa16.03■□□□□ 0.16
CCDC43-204ENST00000588687 GPAT3Q53EU6 434 aa16.03■□□□□ 0.16
CCDC43-204ENST00000588687 MRPL2Q5T653 305 aaKnown RBP16.03■□□□□ 0.16
CCDC43-204ENST00000588687 ANXA8L1Q5VT79 327 aa16.03■□□□□ 0.16
CCDC43-204ENST00000588687 RNF130Q86XS8 419 aa16.03■□□□□ 0.16
CCDC43-204ENST00000588687 POMGNT2Q8NAT1 580 aa16.03■□□□□ 0.16
CCDC43-204ENST00000588687 PKNOX2Q96KN3 472 aa16.03■□□□□ 0.16
CCDC43-204ENST00000588687 TEX37Q96LM6 180 aa16.03■□□□□ 0.16
CCDC43-204ENST00000588687 CCDC115Q96NT0 180 aa16.03■□□□□ 0.16
CCDC43-204ENST00000588687 FOXN4Q96NZ1 517 aa16.03■□□□□ 0.16
CCDC43-204ENST00000588687 SLC38A2Q96QD8 506 aa16.03■□□□□ 0.16
CCDC43-204ENST00000588687 NAA11Q9BSU3 229 aaPredicted RBP16.03■□□□□ 0.16
CCDC43-204ENST00000588687 KATNB1Q9BVA0 655 aa16.03■□□□□ 0.16
CCDC43-204ENST00000588687 SF3B5Q9BWJ5 86 aaKnown RBP16.03■□□□□ 0.16
CCDC43-204ENST00000588687 DPY30Q9C005 99 aa16.03■□□□□ 0.16
CCDC43-204ENST00000588687 BPESC1Q9GZL8 116 aa16.03■□□□□ 0.16
CCDC43-204ENST00000588687 SEC61A2Q9H9S3 476 aa16.03■□□□□ 0.16
CCDC43-204ENST00000588687 OBP2BQ9NPH6 170 aa16.03■□□□□ 0.16
CCDC43-204ENST00000588687 CRNNQ9UBG3 495 aaPredicted RBP16.03■□□□□ 0.16
CCDC43-204ENST00000588687 DSPPQ9NZW4 1301 aa16.02■□□□□ 0.16
CCDC43-204ENST00000588687 LOC390937A0A1W2PQ73 354 aa16.02■□□□□ 0.16
CCDC43-204ENST00000588687 PDE5AO76074 875 aa16.02■□□□□ 0.16
CCDC43-204ENST00000588687 AKR7A3O95154 331 aa16.02■□□□□ 0.16
CCDC43-204ENST00000588687 WNT11O96014 354 aa16.02■□□□□ 0.16
CCDC43-204ENST00000588687 IGLV1-44P01699 117 aa16.02■□□□□ 0.16
CCDC43-204ENST00000588687 APEHP13798 732 aaKnown RBP16.02■□□□□ 0.16
CCDC43-204ENST00000588687 SNRPD2P62316 118 aaKnown RBP16.02■□□□□ 0.16
CCDC43-204ENST00000588687 EFNB3Q15768 340 aa16.02■□□□□ 0.16
CCDC43-204ENST00000588687 ADIPOQQ15848 244 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms