RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 OFCC1Q8IZS5 231 aa17.16■□□□□ 0.34
DDX39A-204ENST00000586558 SLC43A2Q8N370 569 aa17.16■□□□□ 0.34
DDX39A-204ENST00000586558 C9orf106Q8NAJ2 232 aa17.16■□□□□ 0.34
DDX39A-204ENST00000586558 ZNF426Q9BUY5 554 aa17.16■□□□□ 0.34
DDX39A-204ENST00000586558 SRXN1Q9BYN0 137 aa17.16■□□□□ 0.34
DDX39A-204ENST00000586558 SLC19A3Q9BZV2 496 aa17.16■□□□□ 0.34
DDX39A-204ENST00000586558 RNF122Q9H9V4 155 aa17.16■□□□□ 0.34
DDX39A-204ENST00000586558 A4GNTQ9UNA3 340 aa17.16■□□□□ 0.34
DDX39A-204ENST00000586558 FAM32AQ9Y421 112 aaKnown RBP17.16■□□□□ 0.34
DDX39A-204ENST00000586558 V9GYQ6 96 aa17.16■□□□□ 0.34
DDX39A-204ENST00000586558 TRAV36DV7A0A075B6V5 113 aa17.15■□□□□ 0.34
DDX39A-204ENST00000586558 TCRBV5S2A0A599 114 aa17.15■□□□□ 0.34
DDX39A-204ENST00000586558 WIPF3A6NGB9 483 aa17.15■□□□□ 0.34
DDX39A-204ENST00000586558 LIPT2A6NK58 231 aa17.15■□□□□ 0.34
DDX39A-204ENST00000586558 AQP12BA6NM10 295 aa17.15■□□□□ 0.34
DDX39A-204ENST00000586558 TOXO94900 526 aa17.15■□□□□ 0.34
DDX39A-204ENST00000586558 RCBTB2O95199 551 aa17.15■□□□□ 0.34
DDX39A-204ENST00000586558 GPIP06744 558 aa17.15■□□□□ 0.34
DDX39A-204ENST00000586558 RHCEP18577 417 aa17.15■□□□□ 0.34
DDX39A-204ENST00000586558 ENPP1P22413 925 aa17.15■□□□□ 0.34
DDX39A-204ENST00000586558 RBM34P42696 430 aaKnown RBP17.15■□□□□ 0.34
DDX39A-204ENST00000586558 AGFG1P52594 562 aaKnown RBP17.15■□□□□ 0.34
DDX39A-204ENST00000586558 OR2B6P58173 313 aa17.15■□□□□ 0.34
DDX39A-204ENST00000586558 EEF1A1P5Q5VTE0 462 aa17.15■□□□□ 0.34
DDX39A-204ENST00000586558 GTF2IRD2BQ6EKJ0 949 aa17.15■□□□□ 0.34
DDX39A-204ENST00000586558 PPP4R4Q6NUP7 873 aa17.15■□□□□ 0.34
DDX39A-204ENST00000586558 NCCRP1Q6ZVX7 275 aaPredicted RBP17.15■□□□□ 0.34
DDX39A-204ENST00000586558 GTF2IRD2Q86UP8 949 aa17.15■□□□□ 0.34
DDX39A-204ENST00000586558 AQP12AQ8IXF9 295 aa17.15■□□□□ 0.34
DDX39A-204ENST00000586558 OR6S1Q8NH40 331 aa17.15■□□□□ 0.34
DDX39A-204ENST00000586558 MFSD8Q8NHS3 518 aa17.15■□□□□ 0.34
DDX39A-204ENST00000586558 RNF128Q8TEB7 428 aa17.15■□□□□ 0.34
DDX39A-204ENST00000586558 ASB5Q8WWX0 329 aa17.15■□□□□ 0.34
DDX39A-204ENST00000586558 ZNF300Q96RE9 604 aaPredicted RBP17.15■□□□□ 0.34
DDX39A-204ENST00000586558 FNDC11Q9BVV2 318 aa17.15■□□□□ 0.34
DDX39A-204ENST00000586558 TAPBPLQ9BX59 468 aa17.15■□□□□ 0.34
DDX39A-204ENST00000586558 ANKRD19PQ9H560 264 aa17.15■□□□□ 0.34
DDX39A-204ENST00000586558 MAGIXQ9H6Y5 334 aa17.15■□□□□ 0.34
DDX39A-204ENST00000586558 GP6Q9HCN6 339 aa17.15■□□□□ 0.34
DDX39A-204ENST00000586558 GLRX2Q9NS18 164 aa17.15■□□□□ 0.34
DDX39A-204ENST00000586558 NDUFAF4Q9P032 175 aa17.15■□□□□ 0.34
DDX39A-204ENST00000586558 SLC7A8Q9UHI5 535 aa17.15■□□□□ 0.34
DDX39A-204ENST00000586558 POMPQ9Y244 141 aa17.15■□□□□ 0.34
DDX39A-204ENST00000586558 DOPEY1Q5JWR5 2465 aa17.15■□□□□ 0.34
DDX39A-204ENST00000586558 A0A0G2JNJ9 132 aa17.14■□□□□ 0.33
DDX39A-204ENST00000586558 ZG16O60844 167 aa17.14■□□□□ 0.33
DDX39A-204ENST00000586558 FZD7O75084 574 aa17.14■□□□□ 0.33
DDX39A-204ENST00000586558 AQP8O94778 261 aa17.14■□□□□ 0.33
DDX39A-204ENST00000586558 IMPDH2P12268 514 aa17.14■□□□□ 0.33
DDX39A-204ENST00000586558 CHRNB4P30926 498 aa17.14■□□□□ 0.33
DDX39A-204ENST00000586558 VLDLRP98155 873 aa17.14■□□□□ 0.33
DDX39A-204ENST00000586558 SRSF1Q07955 248 aaKnown RBP eCLIP17.14■□□□□ 0.336e-8■□□□□ 8.9
DDX39A-204ENST00000586558 MFSD13AQ14CX5 517 aa17.14■□□□□ 0.33
DDX39A-204ENST00000586558 RNPS1Q15287 305 aaKnown RBP17.14■□□□□ 0.33
DDX39A-204ENST00000586558 FAM69AQ5T7M9 428 aa17.14■□□□□ 0.33
DDX39A-204ENST00000586558 TTC33Q6PID6 262 aaPredicted RBP17.14■□□□□ 0.33
DDX39A-204ENST00000586558 XKRXQ6PP77 449 aa17.14■□□□□ 0.33
DDX39A-204ENST00000586558 FCRLAQ7L513 359 aa17.14■□□□□ 0.33
DDX39A-204ENST00000586558 TSEN54Q7Z6J9 526 aaKnown RBP17.14■□□□□ 0.33
DDX39A-204ENST00000586558 YTHDF3Q7Z739 585 aaKnown RBP17.14■□□□□ 0.33
DDX39A-204ENST00000586558 ZNF808Q8N4W9 903 aaPredicted RBP17.14■□□□□ 0.33
DDX39A-204ENST00000586558 SSC4DQ8WTU2 575 aa17.14■□□□□ 0.33
DDX39A-204ENST00000586558 HS6ST2Q96MM7 605 aa17.14■□□□□ 0.33
DDX39A-204ENST00000586558 PRSS27Q9BQR3 290 aa17.14■□□□□ 0.33
DDX39A-204ENST00000586558 IL1RAPQ9NPH3 570 aa17.14■□□□□ 0.33
DDX39A-204ENST00000586558 Q9UFV3 132 aa17.14■□□□□ 0.33
DDX39A-204ENST00000586558 RNF6Q9Y252 685 aa17.14■□□□□ 0.33
DDX39A-204ENST00000586558 RELNP78509 3460 aa17.13■□□□□ 0.33
DDX39A-204ENST00000586558 FFAR1O14842 300 aa17.13■□□□□ 0.33
DDX39A-204ENST00000586558 SMAD9O15198 467 aaKnown RBP17.13■□□□□ 0.33
DDX39A-204ENST00000586558 PRSS23O95084 383 aa17.13■□□□□ 0.33
DDX39A-204ENST00000586558 IL18BPO95998 194 aa17.13■□□□□ 0.33
DDX39A-204ENST00000586558 FABP3P05413 133 aa17.13■□□□□ 0.33
DDX39A-204ENST00000586558 TMIGD3P0DMS9 266 aaPredicted RBP17.13■□□□□ 0.33
DDX39A-204ENST00000586558 FPR1P21462 350 aa17.13■□□□□ 0.33
DDX39A-204ENST00000586558 TRAM2Q15035 370 aa17.13■□□□□ 0.33
DDX39A-204ENST00000586558 FAM98BQ52LJ0 330 aaKnown RBP17.13■□□□□ 0.33
DDX39A-204ENST00000586558 PAQR6Q6TCH4 344 aa17.13■□□□□ 0.33
DDX39A-204ENST00000586558 PLXDC2Q6UX71 529 aa17.13■□□□□ 0.33
DDX39A-204ENST00000586558 WDR88Q6ZMY6 472 aa17.13■□□□□ 0.33
DDX39A-204ENST00000586558 MCEMP1Q8IX19 187 aa17.13■□□□□ 0.33
DDX39A-204ENST00000586558 ITLN2Q8WWU7 325 aaPredicted RBP17.13■□□□□ 0.33
DDX39A-204ENST00000586558 KTI12Q96EK9 354 aaPredicted RBP17.13■□□□□ 0.33
DDX39A-204ENST00000586558 GMPPAQ96IJ6 420 aaPredicted RBP17.13■□□□□ 0.33
DDX39A-204ENST00000586558 PIP5K1AQ99755 562 aa17.13■□□□□ 0.33
DDX39A-204ENST00000586558 TACO1Q9BSH4 297 aaKnown RBP17.13■□□□□ 0.33
DDX39A-204ENST00000586558 NAA11Q9BSU3 229 aaPredicted RBP17.13■□□□□ 0.33
DDX39A-204ENST00000586558 PTDSS2Q9BVG9 487 aa17.13■□□□□ 0.33
DDX39A-204ENST00000586558 SFXN3Q9BWM7 321 aa17.13■□□□□ 0.33
DDX39A-204ENST00000586558 KLHL4Q9C0H6 718 aa17.13■□□□□ 0.33
DDX39A-204ENST00000586558 ZNF629Q9UEG4 869 aaPredicted RBP17.13■□□□□ 0.33
DDX39A-204ENST00000586558 PHF3Q92576 2039 aaKnown RBP17.13■□□□□ 0.33
DDX39A-204ENST00000586558 HTR3EA5X5Y0 456 aa17.12■□□□□ 0.33
DDX39A-204ENST00000586558 FTCDNL1E5RQL4 147 aa17.12■□□□□ 0.33
DDX39A-204ENST00000586558 J3KTA2 159 aa17.12■□□□□ 0.33
DDX39A-204ENST00000586558 hCG_2039718K7EN88 272 aa17.12■□□□□ 0.33
DDX39A-204ENST00000586558 PLGP00747 810 aaPredicted RBP17.12■□□□□ 0.33
DDX39A-204ENST00000586558 IGF2P01344 180 aa17.12■□□□□ 0.33
DDX39A-204ENST00000586558 CTSSP25774 331 aa17.12■□□□□ 0.33
DDX39A-204ENST00000586558 OPRM1P35372 400 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms