RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 FCGR1AP12314 374 aa12.23□□□□□ -0.45
VMP1-203ENST00000586245 FASP25445 335 aa12.23□□□□□ -0.45
VMP1-203ENST00000586245 GTF2E2P29084 291 aaKnown RBP12.23□□□□□ -0.45
VMP1-203ENST00000586245 RPS5P46782 204 aaKnown RBP12.23□□□□□ -0.45
VMP1-203ENST00000586245 DIO1P49895 249 aa12.23□□□□□ -0.45
VMP1-203ENST00000586245 UGT2B15P54855 530 aa12.23□□□□□ -0.45
VMP1-203ENST00000586245 EGR4Q05215 589 aa12.23□□□□□ -0.45
VMP1-203ENST00000586245 MRPL49Q13405 166 aaKnown RBP12.23□□□□□ -0.45
VMP1-203ENST00000586245 IGFBP7Q16270 282 aa12.23□□□□□ -0.45
VMP1-203ENST00000586245 FAM69AQ5T7M9 428 aa12.23□□□□□ -0.45
VMP1-203ENST00000586245 PPP4R4Q6NUP7 873 aa12.23□□□□□ -0.45
VMP1-203ENST00000586245 PODNL1Q6PEZ8 512 aa12.23□□□□□ -0.45
VMP1-203ENST00000586245 DOLPP1Q86YN1 238 aa12.23□□□□□ -0.45
VMP1-203ENST00000586245 CDK20Q8IZL9 346 aa12.23□□□□□ -0.45
VMP1-203ENST00000586245 RNF113BQ8IZP6 322 aaKnown RBP12.23□□□□□ -0.45
VMP1-203ENST00000586245 C10orf53Q8N6V4 93 aa12.23□□□□□ -0.45
VMP1-203ENST00000586245 CPNE4Q96A23 557 aaPredicted RBP12.23□□□□□ -0.45
VMP1-203ENST00000586245 ALPK1Q96QP1 1244 aa12.23□□□□□ -0.45
VMP1-203ENST00000586245 TRIB1Q96RU8 372 aa12.23□□□□□ -0.45
VMP1-203ENST00000586245 ZNF426Q9BUY5 554 aa12.23□□□□□ -0.45
VMP1-203ENST00000586245 PRRG4Q9BZD6 226 aa12.23□□□□□ -0.45
VMP1-203ENST00000586245 COQ10BQ9H8M1 238 aa12.23□□□□□ -0.45
VMP1-203ENST00000586245 KRCC1Q9NPI7 259 aaPredicted RBP12.23□□□□□ -0.45
VMP1-203ENST00000586245 DNAJB9Q9UBS3 223 aa12.23□□□□□ -0.45
VMP1-203ENST00000586245 MCTS1Q9ULC4 181 aaKnown RBP12.23□□□□□ -0.45
VMP1-203ENST00000586245 OSGIN2Q9Y236 505 aa12.23□□□□□ -0.45
VMP1-203ENST00000586245 TRAPPC4Q9Y296 219 aa12.23□□□□□ -0.45
VMP1-203ENST00000586245 DNAJC13O75165 2243 aa12.22□□□□□ -0.45
VMP1-203ENST00000586245 A0A087WUU8 490 aa12.22□□□□□ -0.45
VMP1-203ENST00000586245 HTR3EA5X5Y0 456 aa12.22□□□□□ -0.45
VMP1-203ENST00000586245 LIPT2A6NK58 231 aa12.22□□□□□ -0.45
VMP1-203ENST00000586245 CLCA1A8K7I4 914 aa12.22□□□□□ -0.45
VMP1-203ENST00000586245 CLOCKO15516 846 aa12.22□□□□□ -0.45
VMP1-203ENST00000586245 DNPH1O43598 174 aa12.22□□□□□ -0.45
VMP1-203ENST00000586245 LDLRP01130 860 aa12.22□□□□□ -0.45
VMP1-203ENST00000586245 IMPDH2P12268 514 aa12.22□□□□□ -0.45
VMP1-203ENST00000586245 ENPP1P22413 925 aa12.22□□□□□ -0.45
VMP1-203ENST00000586245 ACVR2AP27037 513 aa12.22□□□□□ -0.45
VMP1-203ENST00000586245 RAC3P60763 192 aa12.22□□□□□ -0.45
VMP1-203ENST00000586245 SLC35A1P78382 337 aa12.22□□□□□ -0.45
VMP1-203ENST00000586245 GK3PQ14409 553 aa12.22□□□□□ -0.45
VMP1-203ENST00000586245 MFSD13AQ14CX5 517 aa12.22□□□□□ -0.45
VMP1-203ENST00000586245 OR7A5Q15622 319 aa12.22□□□□□ -0.45
VMP1-203ENST00000586245 ACSF3Q4G176 576 aaPredicted RBP12.22□□□□□ -0.45
VMP1-203ENST00000586245 EMC4Q5J8M3 183 aa12.22□□□□□ -0.45
VMP1-203ENST00000586245 C1orf185Q5T7R7 199 aa12.22□□□□□ -0.45
VMP1-203ENST00000586245 C1QL3Q5VWW1 255 aa12.22□□□□□ -0.45
VMP1-203ENST00000586245 MBOAT2Q6ZWT7 520 aa12.22□□□□□ -0.45
VMP1-203ENST00000586245 P4HA3Q7Z4N8 544 aa12.22□□□□□ -0.45
VMP1-203ENST00000586245 LSRQ86X29 649 aaPredicted RBP12.22□□□□□ -0.45
VMP1-203ENST00000586245 OR6S1Q8NH40 331 aa12.22□□□□□ -0.45
VMP1-203ENST00000586245 PFN4Q8NHR9 129 aa12.22□□□□□ -0.45
VMP1-203ENST00000586245 MFSD8Q8NHS3 518 aa12.22□□□□□ -0.45
VMP1-203ENST00000586245 SLC7A13Q8TCU3 470 aa12.22□□□□□ -0.45
VMP1-203ENST00000586245 TAAR8Q969N4 342 aa12.22□□□□□ -0.45
VMP1-203ENST00000586245 SLC25A36Q96CQ1 311 aa12.22□□□□□ -0.45
VMP1-203ENST00000586245 SGTBQ96EQ0 304 aa12.22□□□□□ -0.45
VMP1-203ENST00000586245 NAA11Q9BSU3 229 aaPredicted RBP12.22□□□□□ -0.45
VMP1-203ENST00000586245 PTDSS2Q9BVG9 487 aa12.22□□□□□ -0.45
VMP1-203ENST00000586245 C6orf203Q9P0P8 240 aaPredicted RBP12.22□□□□□ -0.45
VMP1-203ENST00000586245 SH3BGRL2Q9UJC5 107 aa12.22□□□□□ -0.45
VMP1-203ENST00000586245 TINAGQ9UJW2 476 aa12.22□□□□□ -0.45
VMP1-203ENST00000586245 SAMHD1Q9Y3Z3 626 aaKnown RBP12.22□□□□□ -0.45
VMP1-203ENST00000586245 LYVE1Q9Y5Y7 322 aa12.22□□□□□ -0.45
VMP1-203ENST00000586245 SVILO95425 2214 aa12.22□□□□□ -0.45
VMP1-203ENST00000586245 MED12Q93074 2177 aa12.22□□□□□ -0.45
VMP1-203ENST00000586245 SHANK1Q9Y566 2161 aa12.22□□□□□ -0.45
VMP1-203ENST00000586245 TRBV4-1A0A0J9YWV2 114 aa12.21□□□□□ -0.45
VMP1-203ENST00000586245 SH3PXD2BA1X283 911 aa12.21□□□□□ -0.45
VMP1-203ENST00000586245 ENO4A6NNW6 628 aa12.21□□□□□ -0.45
VMP1-203ENST00000586245 EIF1BO60739 113 aaKnown RBP12.21□□□□□ -0.45
VMP1-203ENST00000586245 E2F6O75461 281 aa12.21□□□□□ -0.45
VMP1-203ENST00000586245 CH25HO95992 272 aa12.21□□□□□ -0.45
VMP1-203ENST00000586245 MT-ATP6P00846 226 aa12.21□□□□□ -0.45
VMP1-203ENST00000586245 IGF2P01344 180 aa12.21□□□□□ -0.45
VMP1-203ENST00000586245 IFI30P13284 250 aa12.21□□□□□ -0.45
VMP1-203ENST00000586245 FPR1P21462 350 aa12.21□□□□□ -0.45
VMP1-203ENST00000586245 FUT4P22083 530 aa12.21□□□□□ -0.45
VMP1-203ENST00000586245 GNLYP22749 145 aa12.21□□□□□ -0.45
VMP1-203ENST00000586245 IFNGR2P38484 337 aa12.21□□□□□ -0.45
VMP1-203ENST00000586245 HMGA2P52926 109 aa12.21□□□□□ -0.45
VMP1-203ENST00000586245 NUP107P57740 925 aa12.21□□□□□ -0.45
VMP1-203ENST00000586245 PON3Q15166 354 aa12.21□□□□□ -0.45
VMP1-203ENST00000586245 ZNF239Q16600 458 aaKnown RBP12.21□□□□□ -0.45
VMP1-203ENST00000586245 EXOC3L2Q2M3D2 409 aa12.21□□□□□ -0.45
VMP1-203ENST00000586245 TBPL2Q6SJ96 375 aa12.21□□□□□ -0.45
VMP1-203ENST00000586245 RPTNQ6XPR3 784 aa12.21□□□□□ -0.45
VMP1-203ENST00000586245 B3GNT6Q6ZMB0 384 aa12.21□□□□□ -0.45
VMP1-203ENST00000586245 NRMQ8IXM6 262 aa12.21□□□□□ -0.45
VMP1-203ENST00000586245 LINC00471Q8N535 108 aa12.21□□□□□ -0.45
VMP1-203ENST00000586245 OR4K5Q8NGD3 323 aa12.21□□□□□ -0.45
VMP1-203ENST00000586245 PIGXQ8TBF5 258 aa12.21□□□□□ -0.45
VMP1-203ENST00000586245 ZNF845Q96IR2 970 aaPredicted RBP12.21□□□□□ -0.45
VMP1-203ENST00000586245 BDH2Q9BUT1 245 aa12.21□□□□□ -0.45
VMP1-203ENST00000586245 ASPNQ9BXN1 380 aa12.21□□□□□ -0.45
VMP1-203ENST00000586245 SRXN1Q9BYN0 137 aa12.21□□□□□ -0.45
VMP1-203ENST00000586245 CALHM2Q9HA72 323 aa12.21□□□□□ -0.45
VMP1-203ENST00000586245 S100A14Q9HCY8 104 aa12.21□□□□□ -0.45
VMP1-203ENST00000586245 MEPEQ9NQ76 525 aaPredicted RBP12.21□□□□□ -0.45
VMP1-203ENST00000586245 TMEM5Q9Y2B1 443 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms