RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 H3BML4 177 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 BLOC1S5-TXNDC5H3BN57 136 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 KLRC4-KLRK1H3BQV0 150 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 TM4SF5O14894 197 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 MYL12BO14950 172 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 ZNF208O43345 1280 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 RNF13O43567 381 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 AKAP8O43823 692 aaKnown RBP5.62□□□□□ -1.51
LIG3-206ENST00000586058 IDH3BO43837 385 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 CBR3O75828 277 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 SERPINI2O75830 405 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 RENP00797 406 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 CCL3P10147 92 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 FUT1P19526 365 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 CRHBPP24387 322 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 ACVR2AP27037 513 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 DPP4P27487 766 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 GDF1P27539 372 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 RPS5P46782 204 aaKnown RBP5.62□□□□□ -1.51
LIG3-206ENST00000586058 GIPRP48546 466 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 CLK1P49759 484 aaKnown RBP5.62□□□□□ -1.51
LIG3-206ENST00000586058 GTF2A1P52655 376 aaPredicted RBP5.62□□□□□ -1.51
LIG3-206ENST00000586058 SLC16A1P53985 500 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 CDH11P55287 796 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 ISL1P61371 349 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 SNRPGP62308 76 aaKnown RBP5.62□□□□□ -1.51
LIG3-206ENST00000586058 CSNK2A1P68400 391 aaPredicted RBP5.62□□□□□ -1.51
LIG3-206ENST00000586058 CDK5Q00535 292 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.62□□□□□ -1.51
LIG3-206ENST00000586058 POU4F2Q12837 409 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 CDK5R2Q13319 367 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 PMS2P3Q13401 168 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 ZNF74Q16587 644 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 PLPPR5Q32ZL2 321 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 CRTC2Q53ET0 693 aaPredicted RBP5.62□□□□□ -1.51
LIG3-206ENST00000586058 ALG10Q5BKT4 473 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 PDSS1Q5T2R2 415 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 C1orf140Q5VVS0 124 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 TMEM236Q5W0B7 351 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 ANKRD34AQ69YU3 496 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 OR5M10Q6IEU7 315 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 ZNF773Q6PK81 442 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 LYPD8Q6UX82 237 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 ISLR2Q6UXK2 745 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 APOOLQ6UXV4 268 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 WDR88Q6ZMY6 472 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 DPY19L2P2Q6ZN68 376 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 CXXC5Q7LFL8 322 aaKnown RBP5.62□□□□□ -1.51
LIG3-206ENST00000586058 GPR141Q7Z602 305 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 VASH2Q86V25 355 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 IQCF1Q8N6M8 205 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 OR2M3Q8NG83 312 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 OR9Q1Q8NGQ5 310 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 OR5J2Q8NH18 312 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 OR6S1Q8NH40 331 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 OR51A7Q8NH64 312 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 OR14L1PQ8NHC6 308 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 ADAMTS17Q8TE56 1095 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 SLC25A36Q96CQ1 311 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 C1GALT1C1Q96EU7 318 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 POM121Q96HA1 1249 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 SAMD8Q96LT4 415 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 ERMAPQ96PL5 475 aaPredicted RBP5.62□□□□□ -1.51
LIG3-206ENST00000586058 IL4I1Q96RQ9 567 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 FAM173AQ9BQD7 235 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 MESP1Q9BRJ9 268 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 COPS4Q9BT78 406 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 FAM192AQ9GZU8 254 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 ADAM19Q9H013 955 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.62□□□□□ -1.51
LIG3-206ENST00000586058 C20orf141Q9NUB4 165 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 ANKRD10Q9NXR5 420 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 ALKBH4Q9NXW9 302 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 DLL3Q9NYJ7 618 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 CNOT2Q9NZN8 540 aaKnown RBP5.62□□□□□ -1.51
LIG3-206ENST00000586058 GRHPRQ9UBQ7 328 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 REV1Q9UBZ9 1251 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 IL17BQ9UHF5 180 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 SIGLEC7Q9Y286 467 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 PCDHGB1Q9Y5G3 927 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 SMIM31A0A1B0GVY4 71 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 TMEM72A0PK05 275 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 DCDC2BA2VCK2 349 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 CLCA1A8K7I4 914 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 NPIPA5E9PKD4 350 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 LINC01387J3KSC0 135 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 CDC42EP2O14613 210 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 SURF4O15260 269 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 RRP8O43159 456 aaKnown RBP5.61□□□□□ -1.51
LIG3-206ENST00000586058 KLK10O43240 276 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 PRODHO43272 600 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 SEC14L5O43304 696 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 KLF4O43474 513 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 OIP5O43482 229 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 TLX2O43763 284 aaPredicted RBP5.61□□□□□ -1.51
LIG3-206ENST00000586058 PEX14O75381 377 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 PPP1R3DO95685 299 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 RAB36O95755 333 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 FADS2O95864 444 aaKnown RBP5.61□□□□□ -1.51
LIG3-206ENST00000586058 THY1P04216 161 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms