RNA–Protein interactions for RNA: ENST00000585961.1

CLPTM1-204, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-204ENST00000585961 TMEM99Q8N816 258 aa17.59■□□□□ 0.41
CLPTM1-204ENST00000585961 PMM1Q92871 262 aa17.59■□□□□ 0.41
CLPTM1-204ENST00000585961 C3orf49Q96BT1 292 aa17.59■□□□□ 0.41
CLPTM1-204ENST00000585961 AURKBQ96GD4 344 aaPredicted RBP17.59■□□□□ 0.41
CLPTM1-204ENST00000585961 TEX37Q96LM6 180 aa17.59■□□□□ 0.41
CLPTM1-204ENST00000585961 SHARPINQ9H0F6 387 aa17.59■□□□□ 0.41
CLPTM1-204ENST00000585961 EXOSC3Q9NQT5 275 aaKnown RBP17.59■□□□□ 0.41
CLPTM1-204ENST00000585961 PLCE1Q9P212 2302 aa17.59■□□□□ 0.41
CLPTM1-204ENST00000585961 DNPH1O43598 174 aa17.58■□□□□ 0.4
CLPTM1-204ENST00000585961 EIF1BO60739 113 aaKnown RBP17.58■□□□□ 0.4
CLPTM1-204ENST00000585961 GSNP06396 782 aa17.58■□□□□ 0.4
CLPTM1-204ENST00000585961 CHRM4P08173 479 aa17.58■□□□□ 0.4
CLPTM1-204ENST00000585961 GUSBP08236 651 aa17.58■□□□□ 0.4
CLPTM1-204ENST00000585961 BMP4P12644 408 aa17.58■□□□□ 0.4
CLPTM1-204ENST00000585961 ZNF16P17020 682 aaPredicted RBP17.58■□□□□ 0.4
CLPTM1-204ENST00000585961 S100A3P33764 101 aa17.58■□□□□ 0.4
CLPTM1-204ENST00000585961 HTR3AP46098 478 aa17.58■□□□□ 0.4
CLPTM1-204ENST00000585961 HPCAP84074 193 aa17.58■□□□□ 0.4
CLPTM1-204ENST00000585961 TGFBR3Q03167 851 aa17.58■□□□□ 0.4
CLPTM1-204ENST00000585961 LGALS3BPQ08380 585 aa17.58■□□□□ 0.4
CLPTM1-204ENST00000585961 BNIP2Q12982 314 aa17.58■□□□□ 0.4
CLPTM1-204ENST00000585961 OR7A5Q15622 319 aa17.58■□□□□ 0.4
CLPTM1-204ENST00000585961 SMU1Q2TAY7 513 aa17.58■□□□□ 0.4
CLPTM1-204ENST00000585961 OTUD3Q5T2D3 398 aaPredicted RBP17.58■□□□□ 0.4
CLPTM1-204ENST00000585961 ZNF621Q6ZSS3 439 aa17.58■□□□□ 0.4
CLPTM1-204ENST00000585961 AAED1Q7RTV5 226 aa17.58■□□□□ 0.4
CLPTM1-204ENST00000585961 ZIC4Q8N9L1 334 aa17.58■□□□□ 0.4
CLPTM1-204ENST00000585961 PNPT1Q8TCS8 783 aaKnown RBP17.58■□□□□ 0.4
CLPTM1-204ENST00000585961 PROX1Q92786 737 aa17.58■□□□□ 0.4
CLPTM1-204ENST00000585961 FOXN4Q96NZ1 517 aa17.58■□□□□ 0.4
CLPTM1-204ENST00000585961 ZNF385AQ96PM9 386 aaKnown RBP17.58■□□□□ 0.4
CLPTM1-204ENST00000585961 ROPN1BQ9BZX4 212 aaPredicted RBP17.58■□□□□ 0.4
CLPTM1-204ENST00000585961 SLC38A1Q9H2H9 487 aa17.58■□□□□ 0.4
CLPTM1-204ENST00000585961 MTHFD2LQ9H903 347 aaPredicted RBP17.58■□□□□ 0.4
CLPTM1-204ENST00000585961 CHODLQ9H9P2 273 aa17.58■□□□□ 0.4
CLPTM1-204ENST00000585961 ROPN1Q9HAT0 212 aaPredicted RBP17.58■□□□□ 0.4
CLPTM1-204ENST00000585961 RLIMQ9NVW2 624 aa17.58■□□□□ 0.4
CLPTM1-204ENST00000585961 DCTN4Q9UJW0 460 aa17.58■□□□□ 0.4
CLPTM1-204ENST00000585961 SLC9A8Q9Y2E8 581 aa17.58■□□□□ 0.4
CLPTM1-204ENST00000585961 AMDHD2Q9Y303 409 aa17.58■□□□□ 0.4
CLPTM1-204ENST00000585961 SLC35F4A4IF30 521 aa17.57■□□□□ 0.4
CLPTM1-204ENST00000585961 CCDC154A6NI56 674 aa17.57■□□□□ 0.4
CLPTM1-204ENST00000585961 MYZAPP0CAP1 466 aa17.57■□□□□ 0.4
CLPTM1-204ENST00000585961 GKN3PP0CG01 181 aa17.57■□□□□ 0.4
CLPTM1-204ENST00000585961 MPGP29372 298 aa17.57■□□□□ 0.4
CLPTM1-204ENST00000585961 UFM1P61960 85 aa17.57■□□□□ 0.4
CLPTM1-204ENST00000585961 VSNL1P62760 191 aa17.57■□□□□ 0.4
CLPTM1-204ENST00000585961 KRTAP24-1Q3LI83 254 aa17.57■□□□□ 0.4
CLPTM1-204ENST00000585961 FAM174BQ3ZCQ3 159 aa17.57■□□□□ 0.4
CLPTM1-204ENST00000585961 COX20Q5RI15 118 aa17.57■□□□□ 0.4
CLPTM1-204ENST00000585961 GPAT4Q86UL3 456 aa17.57■□□□□ 0.4
CLPTM1-204ENST00000585961 VRK1Q99986 396 aaPredicted RBP17.57■□□□□ 0.4
CLPTM1-204ENST00000585961 NUF2Q9BZD4 464 aa17.57■□□□□ 0.4
CLPTM1-204ENST00000585961 PNPOQ9NVS9 261 aa17.57■□□□□ 0.4
CLPTM1-204ENST00000585961 SVEP1Q4LDE5 3571 aa17.57■□□□□ 0.4
CLPTM1-204ENST00000585961 CFAP73A6NFT4 308 aa17.56■□□□□ 0.4
CLPTM1-204ENST00000585961 AGAP5A6NIR3 686 aa17.56■□□□□ 0.4
CLPTM1-204ENST00000585961 ZNF208O43345 1280 aa17.56■□□□□ 0.4
CLPTM1-204ENST00000585961 KRT33AO76009 404 aa17.56■□□□□ 0.4
CLPTM1-204ENST00000585961 SERPINE1P05121 402 aa17.56■□□□□ 0.4
CLPTM1-204ENST00000585961 NR2F1P10589 423 aa17.56■□□□□ 0.4
CLPTM1-204ENST00000585961 IL7RP16871 459 aa17.56■□□□□ 0.4
CLPTM1-204ENST00000585961 LBPP18428 481 aa17.56■□□□□ 0.4
CLPTM1-204ENST00000585961 CDKN2CP42773 168 aa17.56■□□□□ 0.4
CLPTM1-204ENST00000585961 SLC1A3P43003 542 aa17.56■□□□□ 0.4
CLPTM1-204ENST00000585961 SLC1A6P48664 564 aa17.56■□□□□ 0.4
CLPTM1-204ENST00000585961 PDLIM4P50479 330 aa17.56■□□□□ 0.4
CLPTM1-204ENST00000585961 RPL14P50914 215 aaKnown RBP17.56■□□□□ 0.4
CLPTM1-204ENST00000585961 SWI5Q1ZZU3 235 aa17.56■□□□□ 0.4
CLPTM1-204ENST00000585961 VHLLQ6RSH7 139 aa17.56■□□□□ 0.4
CLPTM1-204ENST00000585961 ANKS4BQ8N8V4 417 aa17.56■□□□□ 0.4
CLPTM1-204ENST00000585961 OR9K2Q8NGE7 335 aa17.56■□□□□ 0.4
CLPTM1-204ENST00000585961 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.56■□□□□ 0.4
CLPTM1-204ENST00000585961 TESCQ96BS2 214 aa17.56■□□□□ 0.4
CLPTM1-204ENST00000585961 TRNT1Q96Q11 434 aaKnown RBP17.56■□□□□ 0.4
CLPTM1-204ENST00000585961 AMBRA1Q9C0C7 1298 aa17.56■□□□□ 0.4
CLPTM1-204ENST00000585961 RAP2CQ9Y3L5 183 aa17.56■□□□□ 0.4
CLPTM1-204ENST00000585961 YLPM1P49750 1951 aaKnown RBP17.56■□□□□ 0.4
CLPTM1-204ENST00000585961 LOC100289279A0A1B0GTE1 492 aa17.55■□□□□ 0.4
CLPTM1-204ENST00000585961 NR5A2O00482 541 aa17.55■□□□□ 0.4
CLPTM1-204ENST00000585961 LGI1O95970 557 aa17.55■□□□□ 0.4
CLPTM1-204ENST00000585961 WNT11O96014 354 aa17.55■□□□□ 0.4
CLPTM1-204ENST00000585961 CXCR1P25024 350 aa17.55■□□□□ 0.4
CLPTM1-204ENST00000585961 IL12AP29459 219 aa17.55■□□□□ 0.4
CLPTM1-204ENST00000585961 TUBA1BP68363 451 aa17.55■□□□□ 0.4
CLPTM1-204ENST00000585961 TUBA4AP68366 448 aa17.55■□□□□ 0.4
CLPTM1-204ENST00000585961 MRPL2Q5T653 305 aaKnown RBP17.55■□□□□ 0.4
CLPTM1-204ENST00000585961 TMEM225Q6GV28 225 aa17.55■□□□□ 0.4
CLPTM1-204ENST00000585961 PAQR6Q6TCH4 344 aa17.55■□□□□ 0.4
CLPTM1-204ENST00000585961 KLHL24Q6TFL4 600 aa17.55■□□□□ 0.4
CLPTM1-204ENST00000585961 TUBA1AQ71U36 451 aa17.55■□□□□ 0.4
CLPTM1-204ENST00000585961 SPATA19Q7Z5L4 167 aa17.55■□□□□ 0.4
CLPTM1-204ENST00000585961 WDR60Q8WVS4 1066 aa17.55■□□□□ 0.4
CLPTM1-204ENST00000585961 OIT3Q8WWZ8 545 aa17.55■□□□□ 0.4
CLPTM1-204ENST00000585961 ZIM3Q96PE6 472 aa17.55■□□□□ 0.4
CLPTM1-204ENST00000585961 SORCS2Q96PQ0 1159 aa17.55■□□□□ 0.4
CLPTM1-204ENST00000585961 PANX1Q96RD7 426 aa17.55■□□□□ 0.4
CLPTM1-204ENST00000585961 ADAM19Q9H013 955 aa17.55■□□□□ 0.4
CLPTM1-204ENST00000585961 IGHV1-18A0A0C4DH31 117 aa17.54■□□□□ 0.4
CLPTM1-204ENST00000585961 LIPT2A6NK58 231 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms