RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 SLC2A5P22732 501 aa10.29□□□□□ -0.76
LIG3-204ENST00000585740 RPL4P36578 427 aaKnown RBP10.29□□□□□ -0.76
LIG3-204ENST00000585740 ETV6P41212 452 aa10.29□□□□□ -0.76
LIG3-204ENST00000585740 EMP2P54851 167 aa10.29□□□□□ -0.76
LIG3-204ENST00000585740 SLC26A5P58743 744 aa10.29□□□□□ -0.76
LIG3-204ENST00000585740 RPS4XP62701 263 aaKnown RBP10.29□□□□□ -0.76
LIG3-204ENST00000585740 FHL1Q13642 323 aa10.29□□□□□ -0.76
LIG3-204ENST00000585740 CBFBQ13951 182 aa10.29□□□□□ -0.76
LIG3-204ENST00000585740 GALEQ14376 348 aa10.29□□□□□ -0.76
LIG3-204ENST00000585740 IL11RAQ14626 422 aa10.29□□□□□ -0.76
LIG3-204ENST00000585740 C11orf91Q3C1V1 193 aa10.29□□□□□ -0.76
LIG3-204ENST00000585740 SLC23A3Q6PIS1 610 aa10.29□□□□□ -0.76
LIG3-204ENST00000585740 CD200R1LQ6Q8B3 271 aa10.29□□□□□ -0.76
LIG3-204ENST00000585740 SHFQ7M4L6 423 aa10.29□□□□□ -0.76
LIG3-204ENST00000585740 TMPRSS9Q7Z410 1059 aa10.29□□□□□ -0.76
LIG3-204ENST00000585740 MAML2Q8IZL2 1156 aaPredicted RBP10.29□□□□□ -0.76
LIG3-204ENST00000585740 GATSQ8NAP1 163 aa10.29□□□□□ -0.76
LIG3-204ENST00000585740 POMGNT2Q8NAT1 580 aa10.29□□□□□ -0.76
LIG3-204ENST00000585740 FAM98AQ8NCA5 519 aaKnown RBP10.29□□□□□ -0.76
LIG3-204ENST00000585740 ATP6V1C2Q8NEY4 427 aa10.29□□□□□ -0.76
LIG3-204ENST00000585740 OR5L2Q8NGL0 311 aa10.29□□□□□ -0.76
LIG3-204ENST00000585740 OR5M3Q8NGP4 307 aa10.29□□□□□ -0.76
LIG3-204ENST00000585740 OR8K3Q8NH51 312 aa10.29□□□□□ -0.76
LIG3-204ENST00000585740 OR5W2Q8NH69 310 aa10.29□□□□□ -0.76
LIG3-204ENST00000585740 SPRYD4Q8WW59 207 aaPredicted RBP10.29□□□□□ -0.76
LIG3-204ENST00000585740 TM9SF4Q92544 642 aa10.29□□□□□ -0.76
LIG3-204ENST00000585740 PTP4A1Q93096 173 aa10.29□□□□□ -0.76
LIG3-204ENST00000585740 KISS1RQ969F8 398 aaPredicted RBP10.29□□□□□ -0.76
LIG3-204ENST00000585740 COX4I2Q96KJ9 171 aa10.29□□□□□ -0.76
LIG3-204ENST00000585740 CEP19Q96LK0 163 aa10.29□□□□□ -0.76
LIG3-204ENST00000585740 ZNF649Q9BS31 505 aa10.29□□□□□ -0.76
LIG3-204ENST00000585740 ALG8Q9BVK2 526 aa10.29□□□□□ -0.76
LIG3-204ENST00000585740 ADAM19Q9H013 955 aa10.29□□□□□ -0.76
LIG3-204ENST00000585740 ENKD1Q9H0I2 346 aa10.29□□□□□ -0.76
LIG3-204ENST00000585740 SLC26A1Q9H2B4 701 aa10.29□□□□□ -0.76
LIG3-204ENST00000585740 OR51V1Q9H2C8 321 aa10.29□□□□□ -0.76
LIG3-204ENST00000585740 RNF167Q9H6Y7 350 aa10.29□□□□□ -0.76
LIG3-204ENST00000585740 TXNL4BQ9NX01 149 aaKnown RBP10.29□□□□□ -0.76
LIG3-204ENST00000585740 HIF3AQ9Y2N7 669 aa10.29□□□□□ -0.76
LIG3-204ENST00000585740 NOX1Q9Y5S8 564 aa10.29□□□□□ -0.76
LIG3-204ENST00000585740 IER3IP1Q9Y5U9 82 aa10.29□□□□□ -0.76
LIG3-204ENST00000585740 ASCC3Q8N3C0 2202 aaKnown RBP10.28□□□□□ -0.76
LIG3-204ENST00000585740 IGKV1D-42A0A075B6H8 117 aa10.28□□□□□ -0.76
LIG3-204ENST00000585740 ISPDA4D126 451 aa10.28□□□□□ -0.76
LIG3-204ENST00000585740 IDSB3KWA1 339 aa10.28□□□□□ -0.76
LIG3-204ENST00000585740 GNB5O14775 395 aa10.28□□□□□ -0.76
LIG3-204ENST00000585740 PLD2O14939 933 aa10.28□□□□□ -0.76
LIG3-204ENST00000585740 OIP5O43482 229 aa10.28□□□□□ -0.76
LIG3-204ENST00000585740 SULT1C4O75897 302 aa10.28□□□□□ -0.76
LIG3-204ENST00000585740 MT-ND5P03915 603 aa10.28□□□□□ -0.76
LIG3-204ENST00000585740 HIST1H2ABP04908 130 aa10.28□□□□□ -0.76
LIG3-204ENST00000585740 SBK2P0C263 348 aa10.28□□□□□ -0.76
LIG3-204ENST00000585740 CXCR1P25024 350 aa10.28□□□□□ -0.76
LIG3-204ENST00000585740 ABCD3P28288 659 aa10.28□□□□□ -0.76
LIG3-204ENST00000585740 P2RX1P51575 399 aa10.28□□□□□ -0.76
LIG3-204ENST00000585740 EFNA3P52797 238 aa10.28□□□□□ -0.76
LIG3-204ENST00000585740 RPS25P62851 125 aaKnown RBP10.28□□□□□ -0.76
LIG3-204ENST00000585740 RNF4P78317 190 aa10.28□□□□□ -0.76
LIG3-204ENST00000585740 IL10RAQ13651 578 aa10.28□□□□□ -0.76
LIG3-204ENST00000585740 DOC2BQ14184 412 aa10.28□□□□□ -0.76
LIG3-204ENST00000585740 CRMP1Q14194 572 aa10.28□□□□□ -0.76
LIG3-204ENST00000585740 GGTLC2Q14390 218 aa10.28□□□□□ -0.76
LIG3-204ENST00000585740 ZNF74Q16587 644 aa10.28□□□□□ -0.76
LIG3-204ENST00000585740 ZNF181Q2M3W8 571 aa10.28□□□□□ -0.76
LIG3-204ENST00000585740 CRTC2Q53ET0 693 aaPredicted RBP10.28□□□□□ -0.76
LIG3-204ENST00000585740 SOWAHCQ53LP3 525 aaPredicted RBP10.28□□□□□ -0.76
LIG3-204ENST00000585740 EMC4Q5J8M3 183 aa10.28□□□□□ -0.76
LIG3-204ENST00000585740 SPANXN2Q5MJ10 180 aa10.28□□□□□ -0.76
LIG3-204ENST00000585740 ZNF362Q5T0B9 420 aaPredicted RBP10.28□□□□□ -0.76
LIG3-204ENST00000585740 ZNF385CQ66K41 422 aaPredicted RBP10.28□□□□□ -0.76
LIG3-204ENST00000585740 C5orf46Q6UWT4 87 aa10.28□□□□□ -0.76
LIG3-204ENST00000585740 APOOLQ6UXV4 268 aa10.28□□□□□ -0.76
LIG3-204ENST00000585740 LANCL3Q6ZV70 420 aa10.28□□□□□ -0.76
LIG3-204ENST00000585740 HIST3H2AQ7L7L0 130 aa10.28□□□□□ -0.76
LIG3-204ENST00000585740 PRR22Q8IZ63 422 aa10.28□□□□□ -0.76
LIG3-204ENST00000585740 SIRT6Q8N6T7 355 aa10.28□□□□□ -0.76
LIG3-204ENST00000585740 C10orf53Q8N6V4 93 aa10.28□□□□□ -0.76
LIG3-204ENST00000585740 OR52E2Q8NGJ4 325 aa10.28□□□□□ -0.76
LIG3-204ENST00000585740 AP3S1Q92572 193 aa10.28□□□□□ -0.76
LIG3-204ENST00000585740 HIST1H2ACQ93077 130 aa10.28□□□□□ -0.76
LIG3-204ENST00000585740 ARSGQ96EG1 525 aa10.28□□□□□ -0.76
LIG3-204ENST00000585740 C1GALT1C1Q96EU7 318 aa10.28□□□□□ -0.76
LIG3-204ENST00000585740 LPAR4Q99677 370 aa10.28□□□□□ -0.76
LIG3-204ENST00000585740 MED20Q9H944 212 aa10.28□□□□□ -0.76
LIG3-204ENST00000585740 FKRPQ9H9S5 495 aa10.28□□□□□ -0.76
LIG3-204ENST00000585740 SMURF1Q9HCE7 757 aa10.28□□□□□ -0.76
LIG3-204ENST00000585740 NRIP3Q9NQ35 241 aa10.28□□□□□ -0.76
LIG3-204ENST00000585740 TRIM36Q9NQ86 728 aa10.28□□□□□ -0.76
LIG3-204ENST00000585740 NANSQ9NR45 359 aa10.28□□□□□ -0.76
LIG3-204ENST00000585740 FAIMQ9NVQ4 179 aa10.28□□□□□ -0.76
LIG3-204ENST00000585740 TOR4AQ9NXH8 423 aa10.28□□□□□ -0.76
LIG3-204ENST00000585740 BABAM2Q9NXR7 383 aa10.28□□□□□ -0.76
LIG3-204ENST00000585740 ZNF229Q9UJW7 825 aa10.28□□□□□ -0.76
LIG3-204ENST00000585740 NXT1Q9UKK6 140 aaKnown RBP10.28□□□□□ -0.76
LIG3-204ENST00000585740 POLHQ9Y253 713 aa10.28□□□□□ -0.76
LIG3-204ENST00000585740 USP24Q9UPU5 2620 aa10.28□□□□□ -0.76
LIG3-204ENST00000585740 IQCMA0A1B0GVH7 501 aa10.27□□□□□ -0.77
LIG3-204ENST00000585740 MCIDASD6RGH6 385 aa10.27□□□□□ -0.77
LIG3-204ENST00000585740 WWP2O00308 870 aa10.27□□□□□ -0.77
LIG3-204ENST00000585740 HCRTR2O43614 444 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms