RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 CASP8Q14790 479 aa12.63□□□□□ -0.39
SDF2-202ENST00000585428 FAM120AOSQ5T036 256 aa12.63□□□□□ -0.39
SDF2-202ENST00000585428 PAQR6Q6TCH4 344 aa12.63□□□□□ -0.39
SDF2-202ENST00000585428 HMGN2P46Q86SG4 172 aa12.63□□□□□ -0.39
SDF2-202ENST00000585428 CMIPQ8IY22 773 aa12.63□□□□□ -0.39
SDF2-202ENST00000585428 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.63□□□□□ -0.39
SDF2-202ENST00000585428 TMEM45BQ96B21 275 aa12.63□□□□□ -0.39
SDF2-202ENST00000585428 TESCQ96BS2 214 aa12.63□□□□□ -0.39
SDF2-202ENST00000585428 DDIT4LQ96D03 193 aa12.63□□□□□ -0.39
SDF2-202ENST00000585428 MSI2Q96DH6 328 aaKnown RBP12.63□□□□□ -0.39
SDF2-202ENST00000585428 C19orf24Q9BVV8 132 aa12.63□□□□□ -0.39
SDF2-202ENST00000585428 PIF1Q9H611 641 aa12.63□□□□□ -0.39
SDF2-202ENST00000585428 LOC100289279A0A1B0GTE1 492 aa12.62□□□□□ -0.39
SDF2-202ENST00000585428 ZC3H12DA2A288 527 aaKnown RBP12.62□□□□□ -0.39
SDF2-202ENST00000585428 AGAP5A6NIR3 686 aa12.62□□□□□ -0.39
SDF2-202ENST00000585428 ATP6V1G2-DDX39BF2Z307 99 aa12.62□□□□□ -0.39
SDF2-202ENST00000585428 HMGN4O00479 90 aa12.62□□□□□ -0.39
SDF2-202ENST00000585428 AP3D1O14617 1153 aa12.62□□□□□ -0.39
SDF2-202ENST00000585428 ITM2AO43736 263 aa12.62□□□□□ -0.39
SDF2-202ENST00000585428 CPSF4O95639 269 aaKnown RBP12.62□□□□□ -0.39
SDF2-202ENST00000585428 WNT11O96014 354 aa12.62□□□□□ -0.39
SDF2-202ENST00000585428 HOXB1P14653 301 aaPredicted RBP12.62□□□□□ -0.39
SDF2-202ENST00000585428 CREB1P16220 341 aa12.62□□□□□ -0.39
SDF2-202ENST00000585428 ZNF16P17020 682 aaPredicted RBP12.62□□□□□ -0.39
SDF2-202ENST00000585428 SRD5A1P18405 259 aa12.62□□□□□ -0.39
SDF2-202ENST00000585428 TACR3P29371 465 aa12.62□□□□□ -0.39
SDF2-202ENST00000585428 PDLIM4P50479 330 aa12.62□□□□□ -0.39
SDF2-202ENST00000585428 POLR2HP52434 150 aaKnown RBP12.62□□□□□ -0.39
SDF2-202ENST00000585428 ANXA8L1Q5VT79 327 aa12.62□□□□□ -0.39
SDF2-202ENST00000585428 FAM166AQ6J272 317 aa12.62□□□□□ -0.39
SDF2-202ENST00000585428 ANKRD46Q86W74 232 aa12.62□□□□□ -0.39
SDF2-202ENST00000585428 LSRQ86X29 649 aaPredicted RBP12.62□□□□□ -0.39
SDF2-202ENST00000585428 RIBC1Q8N443 379 aaPredicted RBP12.62□□□□□ -0.39
SDF2-202ENST00000585428 VPS37AQ8NEZ2 397 aa12.62□□□□□ -0.39
SDF2-202ENST00000585428 FBXO17Q96EF6 278 aa12.62□□□□□ -0.39
SDF2-202ENST00000585428 SORCS2Q96PQ0 1159 aa12.62□□□□□ -0.39
SDF2-202ENST00000585428 TRNT1Q96Q11 434 aaKnown RBP12.62□□□□□ -0.39
SDF2-202ENST00000585428 SF3B5Q9BWJ5 86 aaKnown RBP12.62□□□□□ -0.39
SDF2-202ENST00000585428 SLC38A1Q9H2H9 487 aa12.62□□□□□ -0.39
SDF2-202ENST00000585428 MTHFD2LQ9H903 347 aaPredicted RBP12.62□□□□□ -0.39
SDF2-202ENST00000585428 LGALS13Q9UHV8 139 aa12.62□□□□□ -0.39
SDF2-202ENST00000585428 PRDM4Q9UKN5 801 aa12.62□□□□□ -0.39
SDF2-202ENST00000585428 LOC390937A0A1W2PQ73 354 aa12.61□□□□□ -0.39
SDF2-202ENST00000585428 KLF11O14901 512 aa12.61□□□□□ -0.39
SDF2-202ENST00000585428 TYROBPO43914 113 aa12.61□□□□□ -0.39
SDF2-202ENST00000585428 SERPINF1P36955 418 aa12.61□□□□□ -0.39
SDF2-202ENST00000585428 SRSF2Q01130 221 aaKnown RBP12.61□□□□□ -0.39
SDF2-202ENST00000585428 GGTLC2Q14390 218 aa12.61□□□□□ -0.39
SDF2-202ENST00000585428 SYPL1Q16563 259 aa12.61□□□□□ -0.39
SDF2-202ENST00000585428 GSTA3Q16772 222 aa12.61□□□□□ -0.39
SDF2-202ENST00000585428 GPAT3Q53EU6 434 aa12.61□□□□□ -0.39
SDF2-202ENST00000585428 ANKRD16Q6P6B7 361 aa12.61□□□□□ -0.39
SDF2-202ENST00000585428 AAED1Q7RTV5 226 aa12.61□□□□□ -0.39
SDF2-202ENST00000585428 TMEM99Q8N816 258 aa12.61□□□□□ -0.39
SDF2-202ENST00000585428 POMGNT2Q8NAT1 580 aa12.61□□□□□ -0.39
SDF2-202ENST00000585428 AURKBQ96GD4 344 aaPredicted RBP12.61□□□□□ -0.39
SDF2-202ENST00000585428 ZNF385AQ96PM9 386 aaKnown RBP12.61□□□□□ -0.39
SDF2-202ENST00000585428 DPY30Q9C005 99 aa12.61□□□□□ -0.39
SDF2-202ENST00000585428 C20orf27Q9GZN8 174 aa12.61□□□□□ -0.39
SDF2-202ENST00000585428 OBP2BQ9NPH6 170 aa12.61□□□□□ -0.39
SDF2-202ENST00000585428 MARCOQ9UEW3 520 aaPredicted RBP12.61□□□□□ -0.39
SDF2-202ENST00000585428 KCNS2Q9ULS6 477 aa12.61□□□□□ -0.39
SDF2-202ENST00000585428 IGHV1-18A0A0C4DH31 117 aa12.6□□□□□ -0.39
SDF2-202ENST00000585428 IGHV4-61A0A0C4DH41 118 aa12.6□□□□□ -0.39
SDF2-202ENST00000585428 LIPT2A6NK58 231 aa12.6□□□□□ -0.39
SDF2-202ENST00000585428 AKR7A3O95154 331 aa12.6□□□□□ -0.39
SDF2-202ENST00000585428 GPIP06744 558 aa12.6□□□□□ -0.39
SDF2-202ENST00000585428 C8BP07358 591 aa12.6□□□□□ -0.39
SDF2-202ENST00000585428 CHRM4P08173 479 aa12.6□□□□□ -0.39
SDF2-202ENST00000585428 RPS4Y1P22090 263 aaKnown RBP12.6□□□□□ -0.39
SDF2-202ENST00000585428 PAX7P23759 505 aa12.6□□□□□ -0.39
SDF2-202ENST00000585428 P2RY4P51582 365 aa12.6□□□□□ -0.39
SDF2-202ENST00000585428 EPS8Q12929 822 aa12.6□□□□□ -0.39
SDF2-202ENST00000585428 CEACAM7Q14002 265 aa12.6□□□□□ -0.39
SDF2-202ENST00000585428 HIKESHIQ53FT3 197 aa12.6□□□□□ -0.39
SDF2-202ENST00000585428 OTUD3Q5T2D3 398 aaPredicted RBP12.6□□□□□ -0.39
SDF2-202ENST00000585428 LRRC74BQ6ZQY2 392 aa12.6□□□□□ -0.39
SDF2-202ENST00000585428 IL17RELQ6ZVW7 336 aa12.6□□□□□ -0.39
SDF2-202ENST00000585428 ANKFN1Q8N957 763 aa12.6□□□□□ -0.39
SDF2-202ENST00000585428 OR9K2Q8NGE7 335 aa12.6□□□□□ -0.39
SDF2-202ENST00000585428 BCL2L2Q92843 193 aaPredicted RBP12.6□□□□□ -0.39
SDF2-202ENST00000585428 CCDC115Q96NT0 180 aa12.6□□□□□ -0.39
SDF2-202ENST00000585428 SLC35A5Q9BS91 424 aa12.6□□□□□ -0.39
SDF2-202ENST00000585428 PIMREGQ9BSJ6 248 aa12.6□□□□□ -0.39
SDF2-202ENST00000585428 ROPN1BQ9BZX4 212 aaPredicted RBP12.6□□□□□ -0.39
SDF2-202ENST00000585428 ROPN1Q9HAT0 212 aaPredicted RBP12.6□□□□□ -0.39
SDF2-202ENST00000585428 TMEM45AQ9NWC5 275 aa12.6□□□□□ -0.39
SDF2-202ENST00000585428 BTNL2Q9UIR0 455 aa12.6□□□□□ -0.39
SDF2-202ENST00000585428 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.6□□□□□ -0.39
SDF2-202ENST00000585428 CFAP73A6NFT4 308 aa12.59□□□□□ -0.39
SDF2-202ENST00000585428 AQP7P3A6NL99 342 aa12.59□□□□□ -0.39
SDF2-202ENST00000585428 B9A039 149 aa12.59□□□□□ -0.39
SDF2-202ENST00000585428 TGFAP01135 160 aa12.59□□□□□ -0.39
SDF2-202ENST00000585428 APEHP13798 732 aaKnown RBP12.59□□□□□ -0.39
SDF2-202ENST00000585428 CDH2P19022 906 aaPredicted RBP12.59□□□□□ -0.39
SDF2-202ENST00000585428 ACAA2P42765 397 aaKnown RBP12.59□□□□□ -0.39
SDF2-202ENST00000585428 KHKP50053 298 aa12.59□□□□□ -0.39
SDF2-202ENST00000585428 ADIPOQQ15848 244 aa12.59□□□□□ -0.39
SDF2-202ENST00000585428 C3orf36Q3SXR2 165 aa12.59□□□□□ -0.39
SDF2-202ENST00000585428 SPANXN4Q5MJ08 99 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms