RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 ZNF26P17031 533 aaPredicted RBP14.73□□□□□ -0.05
CDK5RAP3-228ENST00000583363 PTDSS1P48651 473 aaKnown RBP14.73□□□□□ -0.05
CDK5RAP3-228ENST00000583363 DAPP51397 102 aa14.73□□□□□ -0.05
CDK5RAP3-228ENST00000583363 CRYZQ08257 329 aaKnown RBP14.73□□□□□ -0.05
CDK5RAP3-228ENST00000583363 DAG1Q14118 895 aa14.73□□□□□ -0.05
CDK5RAP3-228ENST00000583363 SNCBQ16143 134 aa14.73□□□□□ -0.05
CDK5RAP3-228ENST00000583363 LRRC36Q1X8D7 754 aa14.73□□□□□ -0.05
CDK5RAP3-228ENST00000583363 TMEM176BQ3YBM2 270 aaPredicted RBP14.73□□□□□ -0.05
CDK5RAP3-228ENST00000583363 CMPK2Q5EBM0 449 aa14.73□□□□□ -0.05
CDK5RAP3-228ENST00000583363 FAHD1Q6P587 224 aa14.73□□□□□ -0.05
CDK5RAP3-228ENST00000583363 C5orf46Q6UWT4 87 aa14.73□□□□□ -0.05
CDK5RAP3-228ENST00000583363 TMPRSS11FQ6ZWK6 438 aa14.73□□□□□ -0.05
CDK5RAP3-228ENST00000583363 SIAH3Q8IW03 269 aa14.73□□□□□ -0.05
CDK5RAP3-228ENST00000583363 CDK20Q8IZL9 346 aa14.73□□□□□ -0.05
CDK5RAP3-228ENST00000583363 TEX19Q8NA77 164 aa14.73□□□□□ -0.05
CDK5RAP3-228ENST00000583363 AQP11Q8NBQ7 271 aa14.73□□□□□ -0.05
CDK5RAP3-228ENST00000583363 SLC25A43Q8WUT9 341 aaPredicted RBP14.73□□□□□ -0.05
CDK5RAP3-228ENST00000583363 TAAR8Q969N4 342 aa14.73□□□□□ -0.05
CDK5RAP3-228ENST00000583363 DDIT4LQ96D03 193 aa14.73□□□□□ -0.05
CDK5RAP3-228ENST00000583363 KTI12Q96EK9 354 aaPredicted RBP14.73□□□□□ -0.05
CDK5RAP3-228ENST00000583363 GPA33Q99795 319 aa14.73□□□□□ -0.05
CDK5RAP3-228ENST00000583363 DGCR6LQ9BY27 220 aa14.73□□□□□ -0.05
CDK5RAP3-228ENST00000583363 KLHL4Q9C0H6 718 aa14.73□□□□□ -0.05
CDK5RAP3-228ENST00000583363 OR11A1Q9GZK7 315 aa14.73□□□□□ -0.05
CDK5RAP3-228ENST00000583363 SLC6A15Q9H2J7 730 aa14.73□□□□□ -0.05
CDK5RAP3-228ENST00000583363 USE1Q9NZ43 259 aa14.73□□□□□ -0.05
CDK5RAP3-228ENST00000583363 LUZP4Q9P127 313 aa14.73□□□□□ -0.05
CDK5RAP3-228ENST00000583363 SPENQ96T58 3664 aaKnown RBP14.72□□□□□ -0.05
CDK5RAP3-228ENST00000583363 TRAV36DV7A0A075B6V5 113 aa14.72□□□□□ -0.05
CDK5RAP3-228ENST00000583363 TRGV5A0A0B4J1U4 118 aa14.72□□□□□ -0.05
CDK5RAP3-228ENST00000583363 A0A1B0GVC2 190 aa14.72□□□□□ -0.05
CDK5RAP3-228ENST00000583363 KPNA4O00629 521 aaPredicted RBP14.72□□□□□ -0.05
CDK5RAP3-228ENST00000583363 KLF4O43474 513 aa14.72□□□□□ -0.05
CDK5RAP3-228ENST00000583363 HCN1O60741 890 aa14.72□□□□□ -0.05
CDK5RAP3-228ENST00000583363 WISP2O76076 250 aa14.72□□□□□ -0.05
CDK5RAP3-228ENST00000583363 OPN1LWP04000 364 aa14.72□□□□□ -0.05
CDK5RAP3-228ENST00000583363 PEPDP12955 493 aa14.72□□□□□ -0.05
CDK5RAP3-228ENST00000583363 MAKP20794 623 aa14.72□□□□□ -0.05
CDK5RAP3-228ENST00000583363 STARP49675 285 aa14.72□□□□□ -0.05
CDK5RAP3-228ENST00000583363 PPP2R2BQ00005 443 aa14.72□□□□□ -0.05
CDK5RAP3-228ENST00000583363 LTBQ06643 244 aa14.72□□□□□ -0.05
CDK5RAP3-228ENST00000583363 SYT14P1Q58G82 188 aa14.72□□□□□ -0.05
CDK5RAP3-228ENST00000583363 NHSL2Q5HYW2 709 aa14.72□□□□□ -0.05
CDK5RAP3-228ENST00000583363 C1orf140Q5VVS0 124 aa14.72□□□□□ -0.05
CDK5RAP3-228ENST00000583363 C3orf33Q6P1S2 294 aa14.72□□□□□ -0.05
CDK5RAP3-228ENST00000583363 TRILQ7L0X0 811 aa14.72□□□□□ -0.05
CDK5RAP3-228ENST00000583363 MEX3DQ86XN8 651 aaKnown RBP14.72□□□□□ -0.05
CDK5RAP3-228ENST00000583363 ATG16L2Q8NAA4 619 aa14.72□□□□□ -0.05
CDK5RAP3-228ENST00000583363 OR6S1Q8NH40 331 aa14.72□□□□□ -0.05
CDK5RAP3-228ENST00000583363 NEIL3Q8TAT5 605 aa14.72□□□□□ -0.05
CDK5RAP3-228ENST00000583363 BPIFA2Q96DR5 249 aa14.72□□□□□ -0.05
CDK5RAP3-228ENST00000583363 SGTBQ96EQ0 304 aa14.72□□□□□ -0.05
CDK5RAP3-228ENST00000583363 ARL5BQ96KC2 179 aa14.72□□□□□ -0.05
CDK5RAP3-228ENST00000583363 NIPSNAP1Q9BPW8 284 aa14.72□□□□□ -0.05
CDK5RAP3-228ENST00000583363 RBM4BQ9BQ04 359 aaKnown RBP14.72□□□□□ -0.05
CDK5RAP3-228ENST00000583363 PTDSS2Q9BVG9 487 aa14.72□□□□□ -0.05
CDK5RAP3-228ENST00000583363 RBM4Q9BWF3 364 aaKnown RBP14.72□□□□□ -0.05
CDK5RAP3-228ENST00000583363 LDAHQ9H6V9 325 aa14.72□□□□□ -0.05
CDK5RAP3-228ENST00000583363 KRCC1Q9NPI7 259 aaPredicted RBP14.72□□□□□ -0.05
CDK5RAP3-228ENST00000583363 C8orf4Q9NR00 106 aa14.72□□□□□ -0.05
CDK5RAP3-228ENST00000583363 TMEM5Q9Y2B1 443 aa14.72□□□□□ -0.05
CDK5RAP3-228ENST00000583363 LIPGQ9Y5X9 500 aa14.72□□□□□ -0.05
CDK5RAP3-228ENST00000583363 MED12Q93074 2177 aa14.72□□□□□ -0.05
CDK5RAP3-228ENST00000583363 USP9YO00507 2555 aaPredicted RBP14.71□□□□□ -0.05
CDK5RAP3-228ENST00000583363 ENO4A6NNW6 628 aa14.71□□□□□ -0.05
CDK5RAP3-228ENST00000583363 NPIPA5E9PKD4 350 aa14.71□□□□□ -0.05
CDK5RAP3-228ENST00000583363 H3BML4 177 aa14.71□□□□□ -0.05
CDK5RAP3-228ENST00000583363 EI24O14681 340 aa14.71□□□□□ -0.05
CDK5RAP3-228ENST00000583363 CH25HO95992 272 aa14.71□□□□□ -0.05
CDK5RAP3-228ENST00000583363 ADAP00813 363 aa14.71□□□□□ -0.05
CDK5RAP3-228ENST00000583363 ALPLP05186 524 aa14.71□□□□□ -0.05
CDK5RAP3-228ENST00000583363 TFPIP10646 304 aa14.71□□□□□ -0.05
CDK5RAP3-228ENST00000583363 POU2F1P14859 743 aa14.71□□□□□ -0.05
CDK5RAP3-228ENST00000583363 BMP7P18075 431 aa14.71□□□□□ -0.05
CDK5RAP3-228ENST00000583363 FUT1P19526 365 aa14.71□□□□□ -0.05
CDK5RAP3-228ENST00000583363 SHC1P29353 583 aa14.71□□□□□ -0.05
CDK5RAP3-228ENST00000583363 GSSP48637 474 aa14.71□□□□□ -0.05
CDK5RAP3-228ENST00000583363 ALDH3A2P51648 485 aa14.71□□□□□ -0.05
CDK5RAP3-228ENST00000583363 KLRB1Q12918 225 aa14.71□□□□□ -0.05
CDK5RAP3-228ENST00000583363 ZNF74Q16587 644 aa14.71□□□□□ -0.05
CDK5RAP3-228ENST00000583363 KDM4DQ6B0I6 523 aa14.71□□□□□ -0.05
CDK5RAP3-228ENST00000583363 CD300LDQ6UXZ3 194 aa14.71□□□□□ -0.05
CDK5RAP3-228ENST00000583363 GALNT4Q8N4A0 578 aa14.71□□□□□ -0.05
CDK5RAP3-228ENST00000583363 PACRGLQ8N7B6 248 aa14.71□□□□□ -0.05
CDK5RAP3-228ENST00000583363 MAGEE2Q8TD90 523 aaPredicted RBP14.71□□□□□ -0.05
CDK5RAP3-228ENST00000583363 LIPHQ8WWY8 451 aa14.71□□□□□ -0.05
CDK5RAP3-228ENST00000583363 ABTB1Q969K4 478 aaPredicted RBP14.71□□□□□ -0.05
CDK5RAP3-228ENST00000583363 FAM46AQ96IP4 442 aaKnown RBP14.71□□□□□ -0.05
CDK5RAP3-228ENST00000583363 TMEM185BQ9H7F4 350 aa14.71□□□□□ -0.05
CDK5RAP3-228ENST00000583363 TMEFF2Q9UIK5 374 aaPredicted RBP14.71□□□□□ -0.05
CDK5RAP3-228ENST00000583363 NPIPA1Q9UND3 350 aa14.71□□□□□ -0.05
CDK5RAP3-228ENST00000583363 HDGFL3Q9Y3E1 203 aa14.71□□□□□ -0.05
CDK5RAP3-228ENST00000583363 MPDZO75970 2070 aa14.7□□□□□ -0.06
CDK5RAP3-228ENST00000583363 GJE1A6NN92 205 aa14.7□□□□□ -0.06
CDK5RAP3-228ENST00000583363 OR2T1O43869 369 aa14.7□□□□□ -0.06
CDK5RAP3-228ENST00000583363 PTP4A3O75365 173 aa14.7□□□□□ -0.06
CDK5RAP3-228ENST00000583363 OR7A10O76100 309 aa14.7□□□□□ -0.06
CDK5RAP3-228ENST00000583363 AHSA1O95433 338 aa14.7□□□□□ -0.06
CDK5RAP3-228ENST00000583363 ACTL6AO96019 429 aa14.7□□□□□ -0.06
CDK5RAP3-228ENST00000583363 HPRP00739 348 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms