RNA–Protein interactions for RNA: ENST00000581180.1

MKS1-210, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-210ENST00000581180 HELZ2Q9BYK8 2649 aaKnown RBP13.52□□□□□ -0.24
MKS1-210ENST00000581180 DHRS12A0PJE2 317 aa13.52□□□□□ -0.25
MKS1-210ENST00000581180 MBD3L4A6NDZ8 208 aaPredicted RBP13.52□□□□□ -0.25
MKS1-210ENST00000581180 MBD3L3A6NE82 208 aaPredicted RBP13.52□□□□□ -0.25
MKS1-210ENST00000581180 MBD3L5A6NJ08 208 aaPredicted RBP13.52□□□□□ -0.25
MKS1-210ENST00000581180 LIPT2A6NK58 231 aa13.52□□□□□ -0.25
MKS1-210ENST00000581180 FTCDNL1E5RQL4 147 aa13.52□□□□□ -0.25
MKS1-210ENST00000581180 SULT2B1O00204 365 aa13.52□□□□□ -0.25
MKS1-210ENST00000581180 LRRTM2O43300 516 aa13.52□□□□□ -0.25
MKS1-210ENST00000581180 DNPH1O43598 174 aa13.52□□□□□ -0.25
MKS1-210ENST00000581180 TOXO94900 526 aa13.52□□□□□ -0.25
MKS1-210ENST00000581180 GPIP06744 558 aa13.52□□□□□ -0.25
MKS1-210ENST00000581180 IFNA8P32881 189 aa13.52□□□□□ -0.25
MKS1-210ENST00000581180 NUP107P57740 925 aa13.52□□□□□ -0.25
MKS1-210ENST00000581180 CCNIQ14094 377 aa13.52□□□□□ -0.25
MKS1-210ENST00000581180 TRAM2Q15035 370 aa13.52□□□□□ -0.25
MKS1-210ENST00000581180 PON3Q15166 354 aa13.52□□□□□ -0.25
MKS1-210ENST00000581180 SGCBQ16585 318 aa13.52□□□□□ -0.25
MKS1-210ENST00000581180 ZNF239Q16600 458 aaKnown RBP13.52□□□□□ -0.25
MKS1-210ENST00000581180 FAM98BQ52LJ0 330 aaKnown RBP13.52□□□□□ -0.25
MKS1-210ENST00000581180 C1orf146Q5VVC0 180 aa13.52□□□□□ -0.25
MKS1-210ENST00000581180 NCCRP1Q6ZVX7 275 aaPredicted RBP13.52□□□□□ -0.25
MKS1-210ENST00000581180 FJX1Q86VR8 437 aa13.52□□□□□ -0.25
MKS1-210ENST00000581180 CYP4Z1Q86W10 505 aa13.52□□□□□ -0.25
MKS1-210ENST00000581180 P3H2Q8IVL5 708 aa13.52□□□□□ -0.25
MKS1-210ENST00000581180 C9orf106Q8NAJ2 232 aa13.52□□□□□ -0.25
MKS1-210ENST00000581180 MBD3L2Q8NHZ7 208 aaPredicted RBP13.52□□□□□ -0.25
MKS1-210ENST00000581180 FNDC9Q8TBE3 224 aa13.52□□□□□ -0.25
MKS1-210ENST00000581180 TMEM255BQ8WV15 326 aa13.52□□□□□ -0.25
MKS1-210ENST00000581180 WNT2BQ93097 391 aa13.52□□□□□ -0.25
MKS1-210ENST00000581180 TAAR8Q969N4 342 aa13.52□□□□□ -0.25
MKS1-210ENST00000581180 CPNE4Q96A23 557 aaPredicted RBP13.52□□□□□ -0.25
MKS1-210ENST00000581180 DNAJA3Q96EY1 480 aa13.52□□□□□ -0.25
MKS1-210ENST00000581180 PIP5K1AQ99755 562 aa13.52□□□□□ -0.25
MKS1-210ENST00000581180 NMNAT1Q9HAN9 279 aaPredicted RBP13.52□□□□□ -0.25
MKS1-210ENST00000581180 TIGARQ9NQ88 270 aa13.52□□□□□ -0.25
MKS1-210ENST00000581180 FAM32AQ9Y421 112 aaKnown RBP13.52□□□□□ -0.25
MKS1-210ENST00000581180 TRAV36DV7A0A075B6V5 113 aa13.51□□□□□ -0.25
MKS1-210ENST00000581180 A0A1W2PRQ8 180 aa13.51□□□□□ -0.25
MKS1-210ENST00000581180 CIB2O75838 187 aa13.51□□□□□ -0.25
MKS1-210ENST00000581180 AQP8O94778 261 aa13.51□□□□□ -0.25
MKS1-210ENST00000581180 AHSA1O95433 338 aa13.51□□□□□ -0.25
MKS1-210ENST00000581180 RAP2AP10114 183 aa13.51□□□□□ -0.25
MKS1-210ENST00000581180 NQO1P15559 274 aaKnown RBP13.51□□□□□ -0.25
MKS1-210ENST00000581180 KLK2P20151 261 aa13.51□□□□□ -0.25
MKS1-210ENST00000581180 PTNP21246 168 aa13.51□□□□□ -0.25
MKS1-210ENST00000581180 CEACAM8P31997 349 aaPredicted RBP13.51□□□□□ -0.25
MKS1-210ENST00000581180 IDUAP35475 653 aa13.51□□□□□ -0.25
MKS1-210ENST00000581180 TIMP3P35625 211 aa13.51□□□□□ -0.25
MKS1-210ENST00000581180 RBM34P42696 430 aaKnown RBP13.51□□□□□ -0.25
MKS1-210ENST00000581180 AGFG1P52594 562 aaKnown RBP13.51□□□□□ -0.25
MKS1-210ENST00000581180 UGT2B15P54855 530 aa13.51□□□□□ -0.25
MKS1-210ENST00000581180 CSNK2A1P68400 391 aaPredicted RBP13.51□□□□□ -0.25
MKS1-210ENST00000581180 LTBQ06643 244 aa13.51□□□□□ -0.25
MKS1-210ENST00000581180 DGCR6Q14129 220 aa13.51□□□□□ -0.25
MKS1-210ENST00000581180 TMEM211Q6ICI0 200 aa13.51□□□□□ -0.25
MKS1-210ENST00000581180 TTC33Q6PID6 262 aaPredicted RBP13.51□□□□□ -0.25
MKS1-210ENST00000581180 PAPD5Q8NDF8 572 aaKnown RBP13.51□□□□□ -0.25
MKS1-210ENST00000581180 OR6S1Q8NH40 331 aa13.51□□□□□ -0.25
MKS1-210ENST00000581180 MFSD8Q8NHS3 518 aa13.51□□□□□ -0.25
MKS1-210ENST00000581180 SLCO4A1Q96BD0 722 aa13.51□□□□□ -0.25
MKS1-210ENST00000581180 HS6ST2Q96MM7 605 aa13.51□□□□□ -0.25
MKS1-210ENST00000581180 ZNF347Q96SE7 839 aa13.51□□□□□ -0.25
MKS1-210ENST00000581180 FUZQ9BT04 418 aa13.51□□□□□ -0.25
MKS1-210ENST00000581180 SLC19A3Q9BZV2 496 aa13.51□□□□□ -0.25
MKS1-210ENST00000581180 ANKRD19PQ9H560 264 aa13.51□□□□□ -0.25
MKS1-210ENST00000581180 MEPEQ9NQ76 525 aaPredicted RBP13.51□□□□□ -0.25
MKS1-210ENST00000581180 CCM2LQ9NUG4 571 aaPredicted RBP13.51□□□□□ -0.25
MKS1-210ENST00000581180 ERRFI1Q9UJM3 462 aaPredicted RBP13.51□□□□□ -0.25
MKS1-210ENST00000581180 MCTS1Q9ULC4 181 aaKnown RBP13.51□□□□□ -0.25
MKS1-210ENST00000581180 UBR5O95071 2799 aaPredicted RBP13.5□□□□□ -0.25
MKS1-210ENST00000581180 USP9XQ93008 2570 aaPredicted RBP13.5□□□□□ -0.25
MKS1-210ENST00000581180 SLC22A20A6NK97 555 aa13.5□□□□□ -0.25
MKS1-210ENST00000581180 SMAD9O15198 467 aaKnown RBP13.5□□□□□ -0.25
MKS1-210ENST00000581180 OR2T1O43869 369 aa13.5□□□□□ -0.25
MKS1-210ENST00000581180 SYNGR4O95473 234 aa13.5□□□□□ -0.25
MKS1-210ENST00000581180 IGF2P01344 180 aa13.5□□□□□ -0.25
MKS1-210ENST00000581180 BGLAPP02818 100 aa13.5□□□□□ -0.25
MKS1-210ENST00000581180 MT-ND1P03886 318 aa13.5□□□□□ -0.25
MKS1-210ENST00000581180 H1F0P07305 194 aaKnown RBP13.5□□□□□ -0.25
MKS1-210ENST00000581180 HOXB6P17509 224 aaKnown RBP13.5□□□□□ -0.25
MKS1-210ENST00000581180 FPR1P21462 350 aa13.5□□□□□ -0.25
MKS1-210ENST00000581180 ENPP1P22413 925 aa13.5□□□□□ -0.25
MKS1-210ENST00000581180 RPS5P46782 204 aaKnown RBP13.5□□□□□ -0.25
MKS1-210ENST00000581180 ERFP50548 548 aa13.5□□□□□ -0.25
MKS1-210ENST00000581180 OR2B6P58173 313 aa13.5□□□□□ -0.25
MKS1-210ENST00000581180 SLC35A1P78382 337 aa13.5□□□□□ -0.25
MKS1-210ENST00000581180 LSM11P83369 360 aaKnown RBP eCLIP13.5□□□□□ -0.25
MKS1-210ENST00000581180 H3F3AP84243 136 aa13.5□□□□□ -0.25
MKS1-210ENST00000581180 ADORA2A-AS1P86434 159 aa13.5□□□□□ -0.25
MKS1-210ENST00000581180 SRSF1Q07955 248 aaKnown RBP eCLIP13.5□□□□□ -0.25
MKS1-210ENST00000581180 PMPCAQ10713 525 aa13.5□□□□□ -0.25
MKS1-210ENST00000581180 OR7A5Q15622 319 aa13.5□□□□□ -0.25
MKS1-210ENST00000581180 FAM69AQ5T7M9 428 aa13.5□□□□□ -0.25
MKS1-210ENST00000581180 RIPPLY2Q5TAB7 128 aa13.5□□□□□ -0.25
MKS1-210ENST00000581180 TMEM239Q8WW34 195 aa13.5□□□□□ -0.25
MKS1-210ENST00000581180 ROBO4Q8WZ75 1007 aa13.5□□□□□ -0.25
MKS1-210ENST00000581180 DUS3LQ96G46 650 aaKnown RBP13.5□□□□□ -0.25
MKS1-210ENST00000581180 CCDC120Q96HB5 630 aa13.5□□□□□ -0.25
MKS1-210ENST00000581180 EPYCQ99645 322 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms